jgi.p|Nanoce1779_2|574077, gene_771 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|574077
Unique Namegene_771
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_2:396336..398164 +

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Properties
Property NameValue
TranscriptId574163
ProteinId574077
Product nameputative DEAD/DEAH box RNA helicase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_2supercontigscaffold_2:396336..398164 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004386helicase activity
GO:0003676nucleic acid binding
GO:0005524ATP binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL033ncniL033Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region
ncniL032ncniL032Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G01870NO02G01870Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|574077mRNA_771-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|574077mRNA_771Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|574077

>mRNA_771-protein ID=mRNA_771-protein|Name=jgi.p|Nanoce1779_2|574077|organism=Nannochloropsis oceanica|type=polypeptide|length=523bp
MVSLFASSSSTTKAGKKRPRPTTTATEKDGAFVVSKTPAAPALSPDPCTD
ATDAAVSPSAEVEEVALGASVAFLSSSSWTQLGLAAWIQRACTTMGFKRP
TPVQEKCIPSVLQGRDVMGCAETGSGKTAAFALPMLHRLSEDPYGIFGLV
LTPTRELAIQISEQFQALGAPLNLRHTVVIGGVSMVHQSVELARRPHIVV
ATPGRLWDHLRGAVPPDLSKCRFLVLDEADRLFCDGFEKHLAAILGAMTH
PRRQTLLFSATMTHSLENLKSLTRVQPVLFDLTKERTLPSSLQQQYLFMP
AQVKMCYLVCLLRKVLLPNKSATSSSTSSDVKSVIIFVGTCQRCQEVTEV
MIESGLAAVSLHSVLSQKRRLASLGKFKSSLVKVLVSTDVASRGLDIPEV
DLVVNFDLPRVPSDYVHRVGRTARAGRRGRAVAMVTQYDVALLQRIEVLV
GRKMEKCEDVREEEVVKLLNPVAKATRAAKMRLMEVGFDFEVEEHLRRKK
RDRKERYQRKRNRVAREGGGES*
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Synonyms
Publications