NO02G01870, NO02G01870 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G01870 vs. NCBI_GenBank
Match: EWM30521.1 (atp-dependent rna helicase ddx49-like protein [Nannochloropsis gaditana]) HSP 1 Score: 682.9 bits (1761), Expect = 7.600e-193 Identity = 372/534 (69.66%), Postives = 421/534 (78.84%), Query Frame = 0 Query: 1 MVSLFASSSST-TKAGKKRPRPTTTATEKDGAFVVSKTPAAPALSPDPCTDATDAAVSPSAEVEEVALGASVAFLSSSSWTQLGLAAWIQRACTTMGFKRPTPVQEKCIPSVLQGRDVMGCAETGSGKTAAFALPMLHRLSEDPYGIFGLVLTPTRELAIQISEQFQALGAPLNLRHTVVIGGVSMVHQSVELARRPHIVVATPGRLWDHLRGAVPPDLSKCRFLVLDEADRLFCDGFEKHLAAILGAMTHPRRQTLLFSATMTHSLENLKSLTRVQPVLFDLTKERTLPSSLQQQYLFMPAQVKMCYLVCLLRKVLLPNKSAT--------------SSSTSSDVKSVIIFVGTCQRCQEVTEVMIESGLAAVSLHSVLSQKRRLASLGKFKSSLVKVLVSTDVASRGLDIPEVDLVVNFDLPRVPSDYVHRVGRTARAGRRGRAVAMVTQYDVALLQRIEVLVGRKMEKCEDVREEEVVKLLNPVAKATRAAKMRLMEVGFDFEVEEHLRRKKRDRKERYQRKRNRVAREGG 520 MVSLFA+SS KA KKRPR K G APA+ + V+E + A LSSS WTQLGLA WIQ AC MGFKRPTPVQE+CIPS+LQGRDVMGCAETGSGKTAAFALPMLHRLSEDPYG+FGLVLTPTRELAIQI+EQFQALGAPL LRH VVIGG SMV Q+VELARRPH+VVATPGRLWDHLRGA PPDLSK FLVLDEADRLFCDGFE+HLA IL AM HPRRQTLLFSATMT++L++LK LTRVQPVLFDLT+ R LP+SLQ++YLF+PAQVKMCYL+ LL+K+LL + T S T+ VKS ++FVGTCQRCQEV EV++E+GL AVSLHSVLSQKRRLA+LGKFKSSLV+VLVSTDVASRGLDIP+V LV+N+DLPR+ +DY+HRVGRTARAGR GRAV+MVTQYDVALLQ +E + GRKM CE+V EEEVV+LLNPVAKATRAA+MRLMEVGFD +V EHL RKKR +K+ +EGG Sbjct: 1 MVSLFATSSKVLRKASKKRPRSVVEEEAKVG--------TAPAVG------GSQLKGVGRESVQEAGVDAGSDSLSSSCWTQLGLAPWIQGACNAMGFKRPTPVQEQCIPSILQGRDVMGCAETGSGKTAAFALPMLHRLSEDPYGVFGLVLTPTRELAIQIAEQFQALGAPLGLRHCVVIGGESMVQQAVELARRPHVVVATPGRLWDHLRGAAPPDLSKATFLVLDEADRLFCDGFEQHLAGILAAMRHPRRQTLLFSATMTNALKDLKRLTRVQPVLFDLTRARALPASLQEEYLFVPAQVKMCYLIRLLQKLLLGVGTETDSVRGRRGAKGAGDESGTAGPVKSAMVFVGTCQRCQEVAEVLLEAGLTAVSLHSVLSQKRRLAALGKFKSSLVRVLVSTDVASRGLDIPDVGLVLNYDLPRLSTDYIHRVGRTARAGRYGRAVSMVTQYDVALLQGVEAVTGRKMPACEEVTEEEVVRLLNPVAKATRAARMRLMEVGFDEQVHEHLERKKRGKKDXXXXXXXAGKKEGG 520
BLAST of NO02G01870 vs. NCBI_GenBank
Match: CBJ31567.1 (DEAD box helicase [Ectocarpus siliculosus]) HSP 1 Score: 470.7 bits (1210), Expect = 5.900e-129 Identity = 273/538 (50.74%), Postives = 354/538 (65.80%), Query Frame = 0 Query: 7 SSSSTTKAG---KKRPRPTTTATEKDGAFVVSKTPAAPALSPDPCTDATDAAVSPSAEVEEVALGASVAFLSSSSWTQLGLAAWIQRACTTMGFKRPTPVQEKCIPSVLQGRDVMGCAETGSGKTAAFALPMLHRLSEDPYGIFGLVLTPTRELAIQISEQFQALGAPLNLRHTVVIGGVSMVHQSVELARRPHIVVATPGRLWDHLRGAVPPDLSKCRFLVLDEADRLFCDGFEKHLAAILGAMTHPRRQTLLFSATMTHSLENLKSLTRVQPVLFDLTKERTLPSSLQQQYLFMPAQVKMCYLVCLLRKVLLPN-----------KSATSSSTSSD-----------------VKSVIIFVGTCQRCQEVTEVMIESGLAAVSLHSVLSQKRRLASLGKFKSSLVKVLVSTDVASRGLDIPEVDLVVNFDLPRVPSDYVHRVGRTARAGRRGRAVAMVTQYDVALLQRIEVLVGRKMEKCEDVREEEVVKLLNPVAKATRAAKMRLMEVGFDFEVEEHLRRKKRDRKERYQRKRNR 514 ++S TTKAG P + T + G + P+ A+ + + + EVA +V +++ LGL W+ AC MGF+RPTPVQ CIP+VL+G+DV+GCAETGSGKTAAFALP+LH LS+DPYG+F +VLTPTRELA+QISEQF ALGA + LRHTVVIGGV ++ QS+ L+ RPH+VVATPGRL DHL+G P L+KCR+LVLDEADRL FE L I + + RQTLLFSATMT +LE L++L PV +DLTK+ T+P +L QQYLFMP Q+K C++V L + N KS + D +SV+IFV C++CQE++E ++E G+ LHS+L Q+RR A+LGKFKS KVL+STDVASRGLDIP VDLV+NFD+PRV +DYVHRVGRTARAGRRGRAV++V+QYD+ L+ IE G + C +V E++V+KLLN VAKA+R A+MRLME GFD E K+R+ ++R + R Sbjct: 41 AASKTTKAGTGDSDVPGGSQATTSRGGK---GSRENGHDVDPNLSAGASHPSAADGSRKAEVAAEGAV-LEEEATFESLGLCDWLLTACKAMGFRRPTPVQRHCIPAVLEGKDVLGCAETGSGKTAAFALPILHELSKDPYGVFAVVLTPTRELAVQISEQFGALGALMGLRHTVVIGGVGILEQSLALSGRPHVVVATPGRLRDHLQGPAAPALAKCRYLVLDEADRLLAPTFEGELPCIPKTLPN-SRQTLLFSATMTSNLEALEALALTNPVKYDLTKKATVPKTLTQQYLFMPRQMKTCFVVQTLNMLASDNLWSDPADRKTRKSRGGAGGLHDNPEADEGQEGTGDGDGRARSVMIFVSKCRKCQELSETLVELGVDCTPLHSLLGQRRRTAALGKFKSQQTKVLISTDVASRGLDIPAVDLVINFDVPRVATDYVHRVGRTARAGRRGRAVSLVSQYDIELVHNIEQYTGTPLGLCPEVEEDDVLKLLNQVAKASRVARMRLMEQGFD---ERETSIKERNSRQRESKGEGR 570
BLAST of NO02G01870 vs. NCBI_GenBank
Match: XP_012193990.1 (hypothetical protein SPRG_00506 [Saprolegnia parasitica CBS 223.65] >KDO35752.1 hypothetical protein SPRG_00506 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 433.3 bits (1113), Expect = 1.000e-117 Identity = 235/473 (49.68%), Postives = 321/473 (67.86%), Query Frame = 0 Query: 51 ATDAAVSPSAEVEEVALGASVAFLSSSSWTQLGLAAWIQRACTTMGFKRPTPVQEKCIPSVLQGRDVMGCAETGSGKTAAFALPMLHRLSEDPYGIFGLVLTPTRELAIQISEQFQALGAPLNLRHTVVIGGVSMVHQSVELARRPHIVVATPGRLWDHLRGAVPPDLSKCRFLVLDEADRLFCDGFEKHLAAILGAMTHPRRQTLLFSATMTHSLENLKSLTRVQPVLFDLTKERTLPSSLQQQYLFMPAQVKMCYLVCLLRKVL---LPNKSATSSS--------------TSSDVKSVIIFVGTCQRCQEVTEVMIESGLAAVSLHSVLSQKRRLASLGKFKSSLVKVLVSTDVASRGLDIPEVDLVVNFDLPRVPSDYVHRVGRTARAGRRGRAVAMVTQYDVALLQRIEVLVGRKMEKCED-VREEEVVKLLNPVAKATRAAKMRLMEVGFDFEVEEHLRRKKRDRKE 506 A + AV+ + + V A V ++++ LGL W+ CT +G +PTPVQ CIP +L GRDV+GCA+TGSGKTAAFALP+LH L ++ YG F LVLTPTRELA QI EQFQALG+ ++LR VV+GGV M+ Q++ L RPH++VATPGRL DH+ PP+L ++LVLDEADRL F K LA +L M RQTLLFSATMT L++L+++ P FD T T S L+Q YLF+PAQ+K YL+ L+ K++ +P++ AT S + +S+++FV TC+ CQ V E+ +E L V LHS++ Q RRLA+LGKFKS L +VL+ TDVASRGLDIPEV V+NFDLPR DY+HRVGRTARAGR+G ++++VTQ+D+ LLQ IE ++ + ++ E+ E EV+K+LN V ATR AKM++ E GFD +V++ +++K+ K+ Sbjct: 13 AVEPAVAAATDDALVPATAKVTPSILTTFSDLGLDPWLVTKCTLLGLHKPTPVQVNCIPEILAGRDVLGCAQTGSGKTAAFALPILHTLGKEMYGPFALVLTPTRELAFQIGEQFQALGSGISLRSCVVVGGVDMMTQALALQERPHVIVATPGRLHDHMLRPNPPNLKLIKYLVLDEADRLLSSTFSKDLAFLLDRMGSSSRQTLLFSATMTADLKDLEAVALTNPFRFDATPSATTVSQLKQSYLFVPAQIKTTYLMYLMSKLVDDSVPDEPATKKSFKGKKHLPIAIPDAPTDKTESMVVFVATCKSCQLVAEIALELELPCVVLHSMMGQSRRLAALGKFKSGLARVLICTDVASRGLDIPEVTHVINFDLPRDADDYIHRVGRTARAGRKGTSISIVTQHDIELLQNIEKVIEKPLDNYEEHAPETEVLKMLNDVTTATRVAKMKMTEHGFDDKVKQRQQQRKKQIKK 485
BLAST of NO02G01870 vs. NCBI_GenBank
Match: OQS01341.1 (DEAD/DEAH box RNA helicase [Achlya hypogyna]) HSP 1 Score: 428.7 bits (1101), Expect = 2.600e-116 Identity = 225/444 (50.68%), Postives = 311/444 (70.05%), Query Frame = 0 Query: 77 SSWTQLGLAAWIQRACTTMGFKRPTPVQEKCIPSVLQGRDVMGCAETGSGKTAAFALPMLHRLSEDPYGIFGLVLTPTRELAIQISEQFQALGAPLNLRHTVVIGGVSMVHQSVELARRPHIVVATPGRLWDHLRGAVPPDLSKCRFLVLDEADRLFCDGFEKHLAAILGAMTHPRRQTLLFSATMTHSLENLKSLTRVQPVLFDLTKERTLPSSLQQQYLFMPAQVKMCYLVCLLRKVL-------LPNKSATSS--------STSSDVKSVIIFVGTCQRCQEVTEVMIESGLAAVSLHSVLSQKRRLASLGKFKSSLVKVLVSTDVASRGLDIPEVDLVVNFDLPRVPSDYVHRVGRTARAGRRGRAVAMVTQYDVALLQRIEVLVGRKMEKCE-DVREEEVVKLLNPVAKATRAAKMRLMEVGFDFEVEEHLRRKKRDRK 505 +++ LGL W+ C+ +G +PTPVQ CIP +L GRDV+GCA+TGSGKTAAFALP+LH L+++ +G F LVLTPTRELA QI EQFQALG+ ++LR VV+GGV M+ Q++ L RPH+++ATPGRL DH+ A PP+L +++VLDEADRL F K LA +L AM RQTLLFSATMT L++L+++ P FD T T + L+Q YLF+PAQ+K YL+ L+ K++ P K+ S +++ +S+++FV TC+ CQ V E+ +E L V LHS++ Q RRLA+LGKFKS L +VL+ TDVASRGLDIPEV V+NFDLPR DY+HRVGRTARAGRRG ++++VTQ+D+ LLQ IE +G+ ++ E + E EV+K+LN V ATR AKM++ E GFD ++++ ++++ R+ Sbjct: 39 TTFADLGLDPWLVAKCSLLGLHKPTPVQVNCIPEILAGRDVLGCAQTGSGKTAAFALPILHNLAKEMFGPFALVLTPTRELAFQIGEQFQALGSGISLRTCVVVGGVDMMTQALALQERPHVIIATPGRLRDHMLRANPPNLKLVQYVVLDEADRLLSAAFSKDLAFLLDAMGTSTRQTLLFSATMTADLKDLEAVALTNPYRFDATPSATTVAQLKQSYLFVPAQIKTTYLMYLMSKLVDDTPTEDKPVKAKKSKKAPPAVVPTSAEKTESMVVFVATCKMCQLVAEIALELELPCVVLHSMMGQARRLAALGKFKSGLARVLICTDVASRGLDIPEVTHVLNFDLPRDADDYIHRVGRTARAGRRGTSISIVTQHDIELLQNIEAAIGKPLDNYEAEAPEAEVLKMLNDVTTATRVAKMKMTEHGFDDKLKQRQLQRQKARQ 482
BLAST of NO02G01870 vs. NCBI_GenBank
Match: GAX98757.1 (Hypothetical protein PINS_006601 [Pythium insidiosum]) HSP 1 Score: 427.6 bits (1098), Expect = 5.700e-116 Identity = 253/530 (47.74%), Postives = 352/530 (66.42%), Query Frame = 0 Query: 15 GKKRPRPTTTATEKDGAFVVSKTPAAPALSPDPCTDATDAAVSPSAEV----EEVALGASVAFLSSSSWTQLGLAAWIQRACTTMGFKRPTPVQEKCIPSVLQGRDVMGCAETGSGKTAAFALPMLHRLSEDPYGIFGLVLTPTRELAIQISEQFQALGAPLNLRHTVVIGGVSMVHQSVELARRPHIVVATPGRLWDHLRGAVPPDLSKCRFLVLDEADRLFCDGFEKHLAAILGAMTHPRRQTLLFSATMTHSLENLKSLTRVQPVLFDLTKERTLPSSLQQQYLFMPAQVKMCYLVCLL-----------------------RKVLLPNKSATSSSTSSDVKSVIIFVGTCQRCQEVTEVMIESGLAAVSLHSVLSQKRRLASLGKFKSSLVKVLVSTDVASRGLDIPEVDLVVNFDLPRVPSDYVHRVGRTARAGRRGRAVAMVTQYDVALLQRIEVLVGRKMEKCE-DVREEEVVKLLNPVAKATRAAKMRLMEVGFDFEVEEHLRRKKRDRKERYQRKRNRVAR 517 GK+R + T V+ TP++ A + P + AT +A + + E+V + +S+A S+ LGL WI + C +G + PTPVQ CIP +L+GRDV+GCA+TGSGKTAAFALP+LH LS+DPYG F +VLTPTRELA QI++QF G+ +R VV+GGV M+ Q+++L RPH+++ATPGRL DHL PP+L+ +F+VLDEADRL F K L IL + +RQTLLFSATMT +L+ L+ + FD T ++L+Q YLF+P QVKM YL+ LL + + LP+ S+T+S++S + ++IFV TC+ C+ V E+ E G V+LHSV+SQ RRLA+LGKFKS L +VLVSTDVASRGLDIPEVD+V+NFDLPR DY+HRVGRTARAGR+G+++++VTQ+D+ALLQ IE +G+KM+ E E++V+KLLN V ATR AKMRL E G D +V+ + K+ ++ E+ ++K++ ++R Sbjct: 6 GKRRRAESKQTTS------VALTPSSTAHAALPQSVATSSAHANDDDAVDSNEKVLVDSSLAPSPLLSFLDLGLDPWIVKKCELVGIRXPTPVQANCIPPILRGRDVLGCAQTGSGKTAAFALPILHELSKDPYGPFAVVLTPTRELAFQIADQFNVFGSSFGVRCAVVVGGVDMLKQALQLQERPHVIIATPGRLHDHLLRPNPPNLALVKFVVLDEADRLLDVSFAKDLGFILDRLP-TKRQTLLFSATMTANLDRLEDMALSNVFKFDATPAVKTVTTLKQHYLFIPLQVKMTYLMYLLSMFQPQDDAEPQEDARKSKKPRTKGLALPDISSTASASSQPL--MMIFVSTCKMCELVGEIGNEMGTKCVTLHSVMSQNRRLAALGKFKSGLSRVLVSTDVASRGLDIPEVDIVINFDLPRDADDYIHRVGRTARAGRKGQSISLVTQHDIALLQNIEAKIGKKMDDMEAQAPEKDVLKLLNXVTTATRVAKMRLTERGXDDKVQSR-KAKRLEQLEKKKKKQHIMSR 525
BLAST of NO02G01870 vs. NCBI_GenBank
Match: XP_008607217.1 (hypothetical protein SDRG_03362 [Saprolegnia diclina VS20] >EQC39156.1 hypothetical protein SDRG_03362 [Saprolegnia diclina VS20]) HSP 1 Score: 425.6 bits (1093), Expect = 2.200e-115 Identity = 238/487 (48.87%), Postives = 320/487 (65.71%), Query Frame = 0 Query: 38 PAAPALSPDPCTDATDAAVSPSAEVEEVALGASVAFLSSSSWTQLGLAAWIQRACTTMGFKRPTPVQEKCIPSVLQGRDVMGCAETGSGKTAAFALPMLHRLSEDPYGIFGLVLTPTRELAIQISEQFQALGAPLNLRHTVVIGGVSMVHQSVELARRPHIVVATPGRLWDHLRGAVPPDLSKCRFLVLDEADRLFCDGFEKHLAAILGAMTHPRRQTLLFSATMTHSLENLKSLTRVQPVLFDLTKERTLPSSLQQQYLFMPAQVKMCYLVCLLRKVL---LPNKSATSSS---------------TSSDVKSVIIFVGTCQRCQEVTEVMIESGLAAVSLHSVLSQKRRLASLGKFKSSLVKVLVSTDVASRGLDIPEVDLVVNFDLPRVPSDYVHRVGRTARAGRRGRAVAMVTQYDVALLQRIEVLVGRKMEKCE-DVREEEVVKLLNPVAKATRAAKMRLMEVGFDFEVEEHLRRKKRDRKE 506 PAA A + D AT A V+PS ++++ LGL W+ CT +G +PTPVQ CIP +L GRDV+GCA+TGSGKTAAFALP+LH L ++ YG F LVLTPTRELA QI EQFQALG+ ++LR VV+GGV M+ Q++ L RPH++VATPGRL DH+ PP+L ++LVLDEADRL F K LA +L M RQTLLFSATMT L++L+++ P FD T T S L+Q YLF+PAQ+K YL+ L+ K++ +P + A S +S+++FV TC+ CQ V E+ +E L V LHS++ Q RRLA+LGKFKS L +VL+ TDVASRGLDIPEV V+NFDLPR DY+HRVGRTARAGR+G ++++VTQ+D+ LLQ IE ++ + ++ E E EV+K+LN V ATR AKM++ E GFD ++++ +++K+ K+ Sbjct: 16 PAAAAATDDVLVPAT-AKVTPSI---------------LTTFSDLGLDPWLVTKCTLLGLHKPTPVQVNCIPEILAGRDVLGCAQTGSGKTAAFALPILHTLGKEMYGPFALVLTPTRELAFQIGEQFQALGSGISLRSCVVVGGVDMMTQALALQERPHVIVATPGRLHDHMLRPNPPNLKLIKYLVLDEADRLLSSTFSKDLAFLLDRMGSSSRQTLLFSATMTADLKDLEAVALTNPFRFDATPSATTVSQLKQSYLFVPAQIKTTYLMYLMSKLVDDSVPEEPAKKKSFKGKKHLPIAIPEADGKDKTESMVVFVATCKSCQLVAEIALELELPCVVLHSMMGQSRRLAALGKFKSGLARVLICTDVASRGLDIPEVTHVINFDLPRDADDYIHRVGRTARAGRKGTSISIVTQHDIELLQNIEKVIEKPLDNYEAHAPETEVLKMLNDVTTATRVAKMKMTEHGFDDKLKQRQQQRKKHTKK 486
BLAST of NO02G01870 vs. NCBI_GenBank
Match: OQS00111.1 (DEAD/DEAH box RNA helicase [Thraustotheca clavata]) HSP 1 Score: 423.3 bits (1087), Expect = 1.100e-114 Identity = 228/468 (48.72%), Postives = 313/468 (66.88%), Query Frame = 0 Query: 62 VEEVALGASVAFLSS--------SSWTQLGLAAWIQRACTTMGFKRPTPVQEKCIPSVLQGRDVMGCAETGSGKTAAFALPMLHRLSEDPYGIFGLVLTPTRELAIQISEQFQALGAPLNLRHTVVIGGVSMVHQSVELARRPHIVVATPGRLWDHLRGAVPPDLSKCRFLVLDEADRLFCDGFEKHLAAILGAMTHPRRQTLLFSATMTHSLENLKSLTRVQPVLFDLTKERTLPSSLQQQYLFMPAQVKMCYLVCLLRKVL-------------------LPNKSATSSSTSSDVKSVIIFVGTCQRCQEVTEVMIESGLAAVSLHSVLSQKRRLASLGKFKSSLVKVLVSTDVASRGLDIPEVDLVVNFDLPRVPSDYVHRVGRTARAGRRGRAVAMVTQYDVALLQRIEVLVGRKMEKCED-VREEEVVKLLNPVAKATRAAKMRLMEVGFDFEVEEHLRRKKR 502 VEE + ASV +++ +++ LGL W+ C+ +G +PTPVQ CIP +L GRDV+GCA+TGSGKTAAFALP+LH L+++ YG F LVLTPTRELA QI +QFQALG+ ++LR VV+GGV M+ Q++ L RPH+++ATPGRL DH+ A PP+L ++LVLDEADRL F K L +L +M +RQTLLFSATMT L++L+++ P FD T T S L+Q YLF+PAQ+K YL+ L+ K++ + T +S+++FV TC+ CQ V E+ +E L V LHS++ Q RRLASLGKFKS + +VL+ TDVASRGLDIP+V V+NFDLPR DY+HRVGRTARAGR+G ++++VTQ+D+ LLQ IE + + ++ E+ V E EV+K+L V ATR AKM++ E GFD +V++ R+K + Sbjct: 19 VEETSSIASVPVVAAKVSTPSILTTFGDLGLDPWLVSKCSLLGLHKPTPVQVNCIPEILAGRDVLGCAQTGSGKTAAFALPILHNLAKEMYGPFALVLTPTRELAFQIGQQFQALGSGISLRSCVVVGGVDMMTQALALQDRPHVIIATPGRLHDHMLRANPPNLKLVQYLVLDEADRLLSATFSKDLTFLLDSMGTTQRQTLLFSATMTADLKDLEAVALTNPYRFDATPTATTVSQLKQSYLFVPAQIKTTYLMYLMSKLIDDSXXXXXXXXXXXXXXXXXSKELILPDPTKDKTESMVVFVATCKMCQLVAEIALELELPCVVLHSMMGQSRRLASLGKFKSGIARVLICTDVASRGLDIPDVTHVINFDLPRDADDYIHRVGRTARAGRKGTSISIVTQHDIELLQNIEKAIEKPLDNYEENVPEAEVLKMLKDVTTATRVAKMKMTERGFDDKVKQRQRQKSK 486
BLAST of NO02G01870 vs. NCBI_GenBank
Match: XP_009835156.1 (hypothetical protein H257_10342 [Aphanomyces astaci] >ETV75522.1 hypothetical protein H257_10342 [Aphanomyces astaci]) HSP 1 Score: 421.4 bits (1082), Expect = 4.100e-114 Identity = 243/496 (48.99%), Postives = 320/496 (64.52%), Query Frame = 0 Query: 29 DGAFVVSKTPAAPALSPDPCTDATDAAVSPSAEVEEVALGASVAFLSSSSWTQLGLAAWIQRACTTMGFKRPTPVQEKCIPSVLQGRDVMGCAETGSGKTAAFALPMLHRLSEDPYGIFGLVLTPTRELAIQISEQFQALGAPLNLRHTVVIGGVSMVHQSVELARRPHIVVATPGRLWDHLRGAVPPDLSKCRFLVLDEADRLFCDGFEKHLAAILGAMTHPRRQTLLFSATMTHSLENLKSLTRVQPVLFDLTKERTLPSSLQQQYLFMPAQVKMCYLVCLLRKVLL---PNKSATSSS----------------TSSDVKSVIIFVGTCQRCQEVTEVMIESGLAAVSLHSVLSQKRRLASLGKFKSSLVKVLVSTDVASRGLDIPEVDLVVNFDLPRVPSDYVHRVGRTARAGRRGRAVAMVTQYDVALLQRIEVLVGRKMEKCED-VREEEVVKLLNPVAKATRAAKMRLMEVGFDFEVEEHLRRKKRDRK 505 D A +V + A D A +P+ E + + + +++ LGL WI C +G +PTPVQ CIP +L GRDVMGCA+TGSGKTAAFALP+LH L+++ YG F LVLTPTRELA QI+EQFQALG+ L+LR VV+GGV M+ Q++ L +RPH++VATPGRL DH+ A PP+L ++LVLDEADRL F K LA +LG QTLLFSATMT L +L+ + P FD T T ++L+Q YLF+PAQ+K YL+ LL+ ++ P++S+ S +S +S+I+FV TC+ CQ + E+ IE L V+LH+V+ Q RRLA+LGKFK+ ++L+STDVASRGLDIP+V VVN+DLPR DY+HRVGRTARAGR G A+++VTQ+D+ LL IE VG+ + ED E +V+KLLN V ATR AKMRL E GFD V R+KK +K Sbjct: 16 DTAPLVPTSKDAAKKEEDVSVSTNIVAAAPTPTTEPTSTTSIL-----TTFADLGLDPWIAAKCKLLGLIKPTPVQANCIPPILAGRDVMGCAQTGSGKTAAFALPILHDLAKEIYGPFALVLTPTRELAYQIAEQFQALGSGLSLRTCVVVGGVDMMTQALTLQQRPHVLVATPGRLRDHMLRANPPNLKLIKYLVLDEADRLLTATFAKDLAYLLGTSVGTSHQTLLFSATMTADLTSLEKMAMTNPFRFDATPTATTVTTLKQSYLFVPAQIKPTYLLFLLQTLVHIDDPDESSPSKKPKKHRRQEVVGPVAMPNNSSSQSMIVFVATCRMCQLLCEIAIEFNLPVVALHAVMGQSRRLAALGKFKAGTARILISTDVASRGLDIPDVSTVVNYDLPRDADDYIHRVGRTARAGRHGSAISLVTQHDIQLLHNIEAKVGKPLANYEDHAPEPQVLKLLNDVTTATRVAKMRLTEHGFDDRVA--ARKKKWTKK 504
BLAST of NO02G01870 vs. NCBI_GenBank
Match: XP_008864595.1 (hypothetical protein H310_02751 [Aphanomyces invadans] >ETW06520.1 hypothetical protein H310_02751 [Aphanomyces invadans]) HSP 1 Score: 416.8 bits (1070), Expect = 1.000e-112 Identity = 244/489 (49.90%), Postives = 323/489 (66.05%), Query Frame = 0 Query: 40 APALSPDPCTDATDAAVSPSAEVEEVALGASVAFLSS--SSWTQLGLAAWIQRACTTMGFKRPTPVQEKCIPSVLQGRDVMGCAETGSGKTAAFALPMLHRLSEDPYGIFGLVLTPTRELAIQISEQFQALGAPLNLRHTVVIGGVSMVHQSVELARRPHIVVATPGRLWDHLRGAVPPDLSKCRFLVLDEADRLFCDGFEKHLAAILGAMTHPRRQTLLFSATMTHSLENLKSLTRVQPVLFDLTKERTLPSSLQQQYLFMPAQVKMCYLVCLLRKVLLPNKS--------------------ATSSSTSSD-VKSVIIFVGTCQRCQEVTEVMIESGLAAVSLHSVLSQKRRLASLGKFKSSLVKVLVSTDVASRGLDIPEVDLVVNFDLPRVPSDYVHRVGRTARAGRRGRAVAMVTQYDVALLQRIEVLVGRKMEKCED-VREEEVVKLLNPVAKATRAAKMRLMEVGFDFEVEEHLRRKKRDRK 505 AP L P A D A V EV ++ A +S +++ LGL WI C +G +PTPVQ CIP +L GRDVMGCA+TGSGKTAAFALP+LH L+++ YG F +VLTPTRELA QI+EQFQALG+ L+LR VV+GGV M+ Q++ L +RPH++VATPGRL DH+ A PP+L ++LVLDEADRL F K L +L + QTLLFSATMT L +L+ + P FD T T + L+Q YLF+PAQ+K YL+ L++K++ + S A +++TS+D KS+++FV TC+ CQ + E+ E L V+LH+V+ Q RRLA+LGKFKS L ++L+STDVASRGLDIP+V V+N+DLPR DY+HRVGRTARAGR G A+++VTQ+D+ALL +E VG+ + ED E +V+KLLN V ATR +KMRL E GFD V+ R+KK +K Sbjct: 15 APPLQP-TSKHADDGA------VVEVPASSTTADPTSILTTFADLGLDPWIAAKCKLLGLHKPTPVQAHCIPPILAGRDVMGCAQTGSGKTAAFALPILHDLAKEIYGPFAVVLTPTRELAYQIAEQFQALGSGLSLRTCVVVGGVDMMTQALSLQQRPHVLVATPGRLRDHMLRANPPNLKLIKYLVLDEADRLLNATFAKDLEFLLDTV-GTSHQTLLFSATMTADLASLEKMAMTNPFRFDATPTATTVTQLKQSYLFVPAQIKPTYLMYLMQKLIDVDDSSVDASEKVKKARRRHDRLEAALAATTSADRSKSMVVFVATCRMCQLMCEIATEFRLPVVALHAVMGQSRRLAALGKFKSGLARILISTDVASRGLDIPDVTHVINYDLPRDADDYIHRVGRTARAGRHGTAISLVTQHDIALLHNVEAKVGKPLTNYEDEAPEADVLKLLNDVTTATRVSKMRLTEHGFDDRVQ--ARKKKWSKK 493
BLAST of NO02G01870 vs. NCBI_GenBank
Match: XP_009529632.1 (hypothetical protein PHYSODRAFT_504921 [Phytophthora sojae] >EGZ15883.1 hypothetical protein PHYSODRAFT_504921 [Phytophthora sojae]) HSP 1 Score: 413.3 bits (1061), Expect = 1.100e-111 Identity = 226/426 (53.05%), Postives = 299/426 (70.19%), Query Frame = 0 Query: 78 SWTQLGLAAWIQRACTTMGFKRPTPVQEKCIPSVLQGRDVMGCAETGSGKTAAFALPMLHRLSEDPYGIFGLVLTPTRELAIQISEQFQALGAPLNLRHTVVIGGVSMVHQSVELARRPHIVVATPGRLWDHLRGAVPPDLSKCRFLVLDEADRLFCDGFEKHLAAILGAMTHPRRQTLLFSATMTHSLENLKSLTRVQPVL-FDLTKERTLPSSLQQQYLFMPAQVKMCYLVCLLRKVLLPNKSATSSSTSSDVKSVIIFVGTCQRCQEVTEVMIESGLAAVSLHSVLSQKRRLASLGKFKSSLVKVLVSTDVASRGLDIPEVDLVVNFDLPRVPSDYVHRVGRTARAGRRGRAVAMVTQYDVALLQRIEVLVGRKMEKCE-DVREEEVVKLLNPVAKATRAAKMRLMEVGFDFEVEEHLRRKKR 502 S+ LG+ W+ + C +G + PTPVQ CIP +L GRDV+GCA+TGSGKTAAFALP+LH LS+DPYG + LVLTPTRELA QI++QF A G+ + +R V++GGV M+ QS+ L +RPHI+VATPGR DHL PP++S +++VLDEADRL F K L+ I + +RQTLLFSATMT +L+ L+ FD T ++L+Q YLF+PAQ K + L A +SS+ ++S++IFV TC+ C+ V E+ E G V+LHS++SQ RRLA+LGKFKS L +L+STDVASRGLDIPEVD+V+NFDLPR DY+HRVGRTARAGR G+A+++VTQ+D+ LLQ IE VG+KM+ E + E++V++LLN V ATR AKM+L E GFD +V H R+ KR Sbjct: 4 SFLNLGVDPWLVKRCELLGIRHPTPVQVHCIPPILSGRDVIGCAQTGSGKTAAFALPILHTLSKDPYGPYALVLTPTRELAFQIADQFNAFGSSMAVRCAVIVGGVDMLKQSLTLQQRPHIIVATPGRFRDHLLRVEPPNISLVKYVVLDEADRLLDVSFAKDLSFIFDKLP-AKRQTLLFSATMTANLDRLEQTALSDDAFRFDTTPSVKTVATLKQFYLFIPAQGKK-------DQDLEQLLEAATSSSKRQLRSMMIFVSTCKMCELVGEIGNELGTKCVTLHSMMSQNRRLAALGKFKSGLSHILISTDVASRGLDIPEVDVVLNFDLPRDADDYIHRVGRTARAGRSGQAISLVTQHDIELLQNIEAKVGKKMDDYEAEAPEKKVLELLNDVTTATRVAKMKLTERGFDDKV--HARKAKR 419 The following BLAST results are available for this feature:
BLAST of NO02G01870 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G01870 ID=NO02G01870|Name=NO02G01870|organism=Nannochloropsis oceanica|type=gene|length=1569bpback to top protein sequence of NO02G01870.1 >NO02G01870.1-protein ID=NO02G01870.1-protein|Name=NO02G01870.1|organism=Nannochloropsis oceanica|type=polypeptide|length=523bpback to top Synonyms
Publications
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