jgi.p|Nanoce1779_2|599276, gene_7591 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|599276
Unique Namegene_7591
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_20:325454..327858 -

Link to JBrowse

Properties
Property NameValue
TranscriptId599362
ProteinId599276
Product nameCitrate synthase-like protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_20supercontigscaffold_20:325454..327858 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004108citrate (Si)-synthase activity
GO:0046912transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer
Vocabulary: Biological Process
TermDefinition
GO:0044262cellular carbohydrate metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL034ncniL034Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO19G01880NO19G01880Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|599276mRNA_7591-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|599276mRNA_7591Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|599276

>mRNA_7591-protein ID=mRNA_7591-protein|Name=jgi.p|Nanoce1779_2|599276|organism=Nannochloropsis oceanica|type=polypeptide|length=472bp
MSNSVVEADQLVILEYRGQRHRLPVKNGCIRAIDLKSASGLMSYDPGYMN
TAVCTSHITYIDGERGILRYRGYPIEQLAKYSSYLEVAFLLLYGELPSAP
QLEHFCARVYQRQAAIHTDLVALLQTIRHDAHSMTSIVSTLAAFSALRAD
ANPALAGQDVYKSRVMREDQMITLLGIFPTLAAQLLLRRTGSEPCITLPS
AAMLLDPTNPRAYVEHFLCLLGLGKARASDSRPDPRVVRALDIILLVHAD
HELNCSTAAVRHLTSSGTDVFTTIAGATGALYGPLHGGATEAVLRMLQEI
GTVERIPAFVEAVKAKKRKLMGFGHRVYKNNDPRAQLVREVAYEVFDVYG
ADPLIHLATALEAAARSDDYFVARKLYPNIDFYSGLIYKAIGFPVDYFPV
LFTMGRMAGWLAHWDELLAGPLEEQKIVRPRQVYLGPIERPYVPLDARGG
GHATGYDEQAPLMTSSMRARL*
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Synonyms
Publications