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Properties
| Property Name | Value |
|---|
| TranscriptId | 599362 |
| Track | FilteredModels2 |
| ProteinId | 599276 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_20 | supercontig | scaffold_20:325454..327858 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7591 ID=mRNA_7591|Name=jgi.p|Nanoce1779_2|599276|organism=Nannochloropsis oceanica|type=mRNA|length=2006bp
ACAGCGGGCCAAACCACGCCCTTATCAACTCTCGCCTCATCTCCCTTATC
CTCCTACTGCGAAATCAGTCCTCGGCGTGGGGCTATCGAACAAAGACCCA
AGAGACGTAAACCAGGCCTTTCATCGCATAGTATTATTCAAAGCAGCAAC
AGCACAAAGAGGTCATGTCCAACTCCGTCGTCGAGGCGGATCAACTAGTC
ATCCTAGAGTATCGAGGCCAACGCCACAGGCTGCCTGTCAAGAATGGGTG
CATAAGAGCCATTGATCTCAAGTCGGCGTCAGGACTTATGTCCTACGATC
CAGGCTATATGAACACGGCTGTCTGCACGAGCCACATCACCTACATAGAC
GGGGAGAGGGGAATTTTGCGGTATCGGGGCTATCCCATCGAGCAGCTGGC
GAAATATTCCAGCTATTTGGAAGTGGCCTTCCTGCTGCTGTACGGCGAGC
TGCCCAGCGCCCCCCAACTCGAGCATTTTTGTGCCCGAGTCTACCAGCGC
CAGGCGGCGATCCACACAGACCTGGTGGCTTTGCTGCAAACCATTCGCCA
TGACGCTCACAGTATGACGTCCATCGTTAGCACTCTGGCCGCCTTCTCTG
CCCTCCGTGCCGACGCCAATCCGGCCCTGGCCGGCCAGGACGTCTACAAG
TCCAGGGTCATGCGAGAAGACCAGATGATCACCCTTTTGGGTATTTTCCC
CACCCTAGCCGCCCAGCTGTTGCTGCGCCGCACTGGGTCAGAGCCGTGTA
TCACATTGCCATCGGCCGCAATGCTCCTTGACCCCACAAACCCCCGCGCC
TACGTGGAGCACTTTCTCTGCTTGCTGGGTCTGGGCAAAGCCCGTGCAAG
CGACAGCCGGCCCGACCCGCGCGTGGTGCGAGCCCTGGACATCATCCTGT
TGGTGCATGCCGACCACGAGCTCAACTGCTCCACAGCCGCAGTCCGTCAC
CTGACCAGCTCGGGTACGGACGTGTTCACGACAATTGCCGGAGCAACCGG
CGCGCTTTATGGGCCCTTACACGGTGGGGCGACAGAGGCGGTCCTGCGCA
TGCTCCAAGAAATTGGGACGGTGGAGCGCATCCCGGCATTTGTGGAGGCT
GTAAAGGCCAAGAAGCGTAAGCTCATGGGTTTTGGGCATCGCGTGTACAA
GAATAACGACCCGCGGGCCCAGCTGGTAAGGGAGGTGGCTTACGAGGTGT
TCGACGTCTATGGTGCCGACCCCTTGATCCACCTGGCCACGGCTCTCGAG
GCCGCGGCCCGCTCGGACGATTACTTCGTCGCCCGCAAGCTCTACCCTAA
CATCGATTTCTATTCAGGTCTGATTTATAAGGCCATCGGCTTCCCCGTCG
ACTATTTTCCCGTGCTGTTCACCATGGGCCGCATGGCGGGCTGGCTGGCC
CACTGGGACGAGCTCTTGGCTGGGCCGTTGGAGGAGCAAAAGATTGTGCG
TCCCCGACAAGTCTACCTTGGTCCCATCGAGCGGCCATACGTTCCGCTGG
ATGCACGTGGGGGAGGACACGCGACCGGCTATGATGAGCAAGCGCCGCTG
ATGACCTCGTCGATGCGAGCACGGCTGTAACGGCGAGAGTGAGGAATAGC
GACCAAGTAAAGAACATGTGTGCACATTTAAACTACGTTTTGAAAAATCT
GCCATTCATGCAAAACTTATTTCATCTCTTTGGTTTTGGCGTCTTAAAGA
GCTGCCGTGTACAGAATCTTGGGCGTAGTATGTATAAACGAATGGGTGAA
ATCCGGATGTGCTATTTTTGTGTGGCTCAACCAAGGCCTGACTTTGACCT
TTCTATTCCAATGTTGCTATTTTCAATCATGCGTAGGAATGAAATAAACA
AATCAGGATGACTGGAGGATGAATGGATGAGTACCAGAGAAGGCGAGGCA
GTGATGCGCGCTGTGCCCATCTGTCGCCGGTATACCACGTATGTAGTATG
TAAATAAACTATAAATAACTAAATAATGAAATAAAATAAATAAATTAAAA
GAAAGG back to topprotein sequence of jgi.p|Nanoce1779_2|599276 >mRNA_7591-protein ID=mRNA_7591-protein|Name=jgi.p|Nanoce1779_2|599276|organism=Nannochloropsis oceanica|type=polypeptide|length=472bp
MSNSVVEADQLVILEYRGQRHRLPVKNGCIRAIDLKSASGLMSYDPGYMN
TAVCTSHITYIDGERGILRYRGYPIEQLAKYSSYLEVAFLLLYGELPSAP
QLEHFCARVYQRQAAIHTDLVALLQTIRHDAHSMTSIVSTLAAFSALRAD
ANPALAGQDVYKSRVMREDQMITLLGIFPTLAAQLLLRRTGSEPCITLPS
AAMLLDPTNPRAYVEHFLCLLGLGKARASDSRPDPRVVRALDIILLVHAD
HELNCSTAAVRHLTSSGTDVFTTIAGATGALYGPLHGGATEAVLRMLQEI
GTVERIPAFVEAVKAKKRKLMGFGHRVYKNNDPRAQLVREVAYEVFDVYG
ADPLIHLATALEAAARSDDYFVARKLYPNIDFYSGLIYKAIGFPVDYFPV
LFTMGRMAGWLAHWDELLAGPLEEQKIVRPRQVYLGPIERPYVPLDARGG
GHATGYDEQAPLMTSSMRARL* back to topmRNA from alignment at scaffold_20:325454..327858- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7591 ID=mRNA_7591|Name=jgi.p|Nanoce1779_2|599276|organism=Nannochloropsis oceanica|type=mRNA|length=2405bp|location=Sequence derived from alignment at scaffold_20:325454..327858- (Nannochloropsis oceanica)
ACAGCGGGCCAAACCACGCCCTTATCAACTCTCGCCTCATCTCCCTTATC
CTCCTACTGCGAAATCAGTCCTCGGCGTGGGGCTATCGAACAAAGACCCA
AGAGACGTAAACCAGGCCTTTCATCGCATAGTATTATTCAAAGCAGCAAC
AGCACAAAGAGGTCATGTCCAACTCCGTCGTCGAGGCGGATCAACTAGTC
ATCCTAGAGTATCGAGGCCAACGCCACAGGCTGCCTGTCAAGAATGGGTG
CATAAGAGCCATTGATCTCAAGTCGGCGTCAGGACTTATGTCCTACGATC
CAGGTACGTAAGATGTAGATGGCTCACTGTACGCGCGAAATGATATTGGT
ACGTAGGTGAGGGAATCGAAGAACAACAGAACCAGTATCTAGATGATACA
CACGACCGTATGGTGTACAGGCTTAGGCATGTAGGTGCGTTCAAAGTTTT
GAACAGAAAAAGATGGAAGAGGCAGATTTGACATGTCTATACACCGGCTC
CCCCCCTCATTACGCGCACCAGCACCCTGAGTGGAAATGATGGAGGGAAA
TCCTGGCTGAATACCGAGGCATGTACTCTTTCCTTGGCTGGGCGGTTTCC
CTATTCACCATTTAAGAACCTTGCTCTTCACTTGATGATCAAATCCATCT
ATCCTTCATCATACCTCTTATTCATCACTTATGCGCCCTCTCAACCCTGC
AGGCTATATGAACACGGCTGTCTGCACGAGCCACATCACCTACATAGACG
GGGAGAGGGGAATTTTGCGGTATCGGGGCTATCCCATCGAGCAGCTGGCG
AAATATTCCAGCTATTTGGAAGTGGCCTTCCTGCTGCTGTACGGCGAGCT
GCCCAGCGCCCCCCAACTCGAGCATTTTTGTGCCCGAGTCTACCAGCGCC
AGGCGGCGATCCACACAGACCTGGTGGCTTTGCTGCAAACCATTCGCCAT
GACGCTCACAGTATGACGTCCATCGTTAGCACTCTGGCCGCCTTCTCTGC
CCTCCGTGCCGACGCCAATCCGGCCCTGGCCGGCCAGGACGTCTACAAGT
CCAGGGTCATGCGAGAAGACCAGATGATCACCCTTTTGGGTATTTTCCCC
ACCCTAGCCGCCCAGCTGTTGCTGCGCCGCACTGGGTCAGAGCCGTGTAT
CACATTGCCATCGGCCGCAATGCTCCTTGACCCCACAAACCCCCGCGCCT
ACGTGGAGCACTTTCTCTGCTTGCTGGGTCTGGGCAAAGCCCGTGCAAGC
GACAGCCGGCCCGACCCGCGCGTGGTGCGAGCCCTGGACATCATCCTGTT
GGTGCATGCCGACCACGAGCTCAACTGCTCCACAGCCGCAGTCCGTCACC
TGACCAGCTCGGGTACGGACGTGTTCACGACAATTGCCGGAGCAACCGGC
GCGCTTTATGGGCCCTTACACGGTGGGGCGACAGAGGCGGTCCTGCGCAT
GCTCCAAGAAATTGGGACGGTGGAGCGCATCCCGGCATTTGTGGAGGCTG
TAAAGGCCAAGAAGCGTAAGCTCATGGGTTTTGGGCATCGCGTGTACAAG
AATAACGACCCGCGGGCCCAGCTGGTAAGGGAGGTGGCTTACGAGGTGTT
CGACGTCTATGGTGCCGACCCCTTGATCCACCTGGCCACGGCTCTCGAGG
CCGCGGCCCGCTCGGACGATTACTTCGTCGCCCGCAAGCTCTACCCTAAC
ATCGATTTCTATTCAGGTCTGATTTATAAGGCCATCGGCTTCCCCGTCGA
CTATTTTCCCGTGCTGTTCACCATGGGCCGCATGGCGGGCTGGCTGGCCC
ACTGGGACGAGCTCTTGGCTGGGCCGTTGGAGGAGCAAAAGATTGTGCGT
CCCCGACAAGTCTACCTTGGTCCCATCGAGCGGCCATACGTTCCGCTGGA
TGCACGTGGGGGAGGACACGCGACCGGCTATGATGAGCAAGCGCCGCTGA
TGACCTCGTCGATGCGAGCACGGCTGTAACGGCGAGAGTGAGGAATAGCG
ACCAAGTAAAGAACATGTGTGCACATTTAAACTACGTTTTGAAAAATCTG
CCATTCATGCAAAACTTATTTCATCTCTTTGGTTTTGGCGTCTTAAAGAG
CTGCCGTGTACAGAATCTTGGGCGTAGTATGTATAAACGAATGGGTGAAA
TCCGGATGTGCTATTTTTGTGTGGCTCAACCAAGGCCTGACTTTGACCTT
TCTATTCCAATGTTGCTATTTTCAATCATGCGTAGGAATGAAATAAACAA
ATCAGGATGACTGGAGGATGAATGGATGAGTACCAGAGAAGGCGAGGCAG
TGATGCGCGCTGTGCCCATCTGTCGCCGGTATACCACGTATGTAGTATGT
AAATAAACTATAAATAACTAAATAATGAAATAAAATAAATAAATTAAAAG
AAAGG back to topCoding sequence (CDS) from alignment at scaffold_20:325454..327858- >mRNA_7591 ID=mRNA_7591|Name=jgi.p|Nanoce1779_2|599276|organism=Nannochloropsis oceanica|type=CDS|length=2832bp|location=Sequence derived from alignment at scaffold_20:325454..327858- (Nannochloropsis oceanica)
GCTATATGAACACGGCTGTCTGCACGAGCCACATCACCTACATAGACGGG
GAGAGGGGAATTTTGCGGTATCGGGGCTATCCCATCGAGCAGCTGGCGAA
ATATTCCAGCTATTTGGAAGTGGCCTTCCTGCTGCTGTACGGCGAGCTGC
CCAGCGCCCCCCAACTCGAGCATTTTTGTGCCCGAGTCTACCAGCGCCAG
GCGGCGATCCACACAGACCTGGTGGCTTTGCTGCAAACCATTCGCCATGA
CGCTCACAGTATGACGTCCATCGTTAGCACTCTGGCCGCCTTCTCTGCCC
TCCGTGCCGACGCCAATCCGGCCCTGGCCGGCCAGGACGTCTACAAGTCC
AGGGTCATGCGAGAAGACCAGATGATCACCCTTTTGGGTATTTTCCCCAC
CCTAGCCGCCCAGCTGTTGCTGCGCCGCACTGGGTCAGAGCCGTGTATCA
CATTGCCATCGGCCGCAATGCTCCTTGACCCCACAAACCCCCGCGCCTAC
GTGGAGCACTTTCTCTGCTTGCTGGGTCTGGGCAAAGCCCGTGCAAGCGA
CAGCCGGCCCGACCCGCGCGTGGTGCGAGCCCTGGACATCATCCTGTTGG
TGCATGCCGACCACGAGCTCAACTGCTCCACAGCCGCAGTCCGTCACCTG
ACCAGCTCGGGTACGGACGTGTTCACGACAATTGCCGGAGCAACCGGCGC
GCTTTATGGGCCCTTACACGGTGGGGCGACAGAGGCGGTCCTGCGCATGC
TCCAAGAAATTGGGACGGTGGAGCGCATCCCGGCATTTGTGGAGGCTGTA
AAGGCCAAGAAGCGTAAGCTCATGGGTTTTGGGCATCGCGTGTACAAGAA
TAACGACCCGCGGGCCCAGCTGGTAAGGGAGGTGGCTTACGAGGTGTTCG
ACGTCTATGGTGCCGACCCCTTGATCCACCTGGCCACGGCTCTCGAGGCC
GCGGCCCGCTCGGACGATTACTTCGTCGCCCGCAAGCTCTACCCTAACAT
CGATTTCTATTCAGGTCTGATTTATAAGGCCATCGGCTTCCCCGTCGACT
ATTTTCCCGTGCTGTTCACCATGGGCCGCATGGCGGGCTGGCTGGCCCAC
TGGGACGAGCTCTTGGCTGGGCCGTTGGAGGAGCAAAAGATTGTGCGTCC
CCGACAAGTCTACCTTGGTCCCATCGAGCGGCCATACGTTCCGCTGGATG
CACGTGGGGGAGGACACGCGACCGGCTATGATGAGCAAGCGCCGCTGATG
ACCTCGTCGATGCGAGCACGGCTGTAAATGTCCAACTCCGTCGTCGAGGC
GGATCAACTAGTCATCCTAGAGTATCGAGGCCAACGCCACAGGCTGCCTG
TCAAGAATGGGTGCATAAGAGCCATTGATCTCAAGTCGGCGTCAGGACTT
ATGTCCTACGATCCAGGCTATATGAACACGGCTGTCTGCACGAGCCACAT
CACCTACATAGACGGGGAGAGGGGAATTTTGCGGTATCGGGGCTATCCCA
TCGAGCAGCTGGCGAAATATTCCAGCTATTTGGAAGTGGCCTTCCTGCTG
CTGTACGGCGAGCTGCCCAGCGCCCCCCAACTCGAGCATTTTTGTGCCCG
AGTCTACCAGCGCCAGGCGGCGATCCACACAGACCTGGTGGCTTTGCTGC
AAACCATTCGCCATGACGCTCACAGTATGACGTCCATCGTTAGCACTCTG
GCCGCCTTCTCTGCCCTCCGTGCCGACGCCAATCCGGCCCTGGCCGGCCA
GGACGTCTACAAGTCCAGGGTCATGCGAGAAGACCAGATGATCACCCTTT
TGGGTATTTTCCCCACCCTAGCCGCCCAGCTGTTGCTGCGCCGCACTGGG
TCAGAGCCGTGTATCACATTGCCATCGGCCGCAATGCTCCTTGACCCCAC
AAACCCCCGCGCCTACGTGGAGCACTTTCTCTGCTTGCTGGGTCTGGGCA
AAGCCCGTGCAAGCGACAGCCGGCCCGACCCGCGCGTGGTGCGAGCCCTG
GACATCATCCTGTTGGTGCATGCCGACCACGAGCTCAACTGCTCCACAGC
CGCAGTCCGTCACCTGACCAGCTCGGGTACGGACGTGTTCACGACAATTG
CCGGAGCAACCGGCGCGCTTTATGGGCCCTTACACGGTGGGGCGACAGAG
GCGGTCCTGCGCATGCTCCAAGAAATTGGGACGGTGGAGCGCATCCCGGC
ATTTGTGGAGGCTGTAAAGGCCAAGAAGCGTAAGCTCATGGGTTTTGGGC
ATCGCGTGTACAAGAATAACGACCCGCGGGCCCAGCTGGTAAGGGAGGTG
GCTTACGAGGTGTTCGACGTCTATGGTGCCGACCCCTTGATCCACCTGGC
CACGGCTCTCGAGGCCGCGGCCCGCTCGGACGATTACTTCGTCGCCCGCA
AGCTCTACCCTAACATCGATTTCTATTCAGGTCTGATTTATAAGGCCATC
GGCTTCCCCGTCGACTATTTTCCCGTGCTGTTCACCATGGGCCGCATGGC
GGGCTGGCTGGCCCACTGGGACGAGCTCTTGGCTGGGCCGTTGGAGGAGC
AAAAGATTGTGCGTCCCCGACAAGTCTACCTTGGTCCCATCGAGCGGCCA
TACGTTCCGCTGGATGCACGTGGGGGAGGACACGCGACCGGCTATGATGA
GCAAGCGCCGCTGATGACCTCGTCGATGCGAGCACGGCTGTAAATGTCCA
ACTCCGTCGTCGAGGCGGATCAACTAGTCATCCTAGAGTATCGAGGCCAA
CGCCACAGGCTGCCTGTCAAGAATGGGTGCATAAGAGCCATTGATCTCAA
GTCGGCGTCAGGACTTATGTCCTACGATCCAG back to top
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