NO19G01880, NO19G01880 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G01880 vs. NCBI_GenBank
Match: EWM23670.1 (citrate synthase [Nannochloropsis gaditana]) HSP 1 Score: 694.9 bits (1792), Expect = 1.700e-196 Identity = 347/461 (75.27%), Postives = 386/461 (83.73%), Query Frame = 0 Query: 12 VILEYRGQRHRLPVKNGCIRAIDLKSASGLMSYDPGYMNTAVCTSHITYIDGERGILRYRGYPIEQLAKYSSYLEVAFLLLYGELPSAPQLEHFCARVYQRQAAIHTDLVALLQTIRHDAHSMTSIVSTLAAFSALRADANPALAGQDVYKSRVMREDQMITLLGIFPTLAAQLLLRRTGSE-PCITLPSAAMLLDPTNPRAYVEHFLCLLGLGKARASDSRPDPRVVRALDIILLVHADHELNCSTAAVRHLTSSGTDVFTTIAGATGALYGPLHGGATEAVLRMLQEIGTVERIPAFVEAVKAKKRKLMGFGHRVYKNNDPRAQLVREVAYEVFDVYGADPLIHLATALEAAARSDDYFVARKLYPNIDFYSGLIYKAIGFPVDYFPVLFTMGRMAGWLAHWDELLAGPLEEQKIVRPRQVYLGPIERPYVPLDARGGGHATGYDEQAPLMTSSMRARL 472 V +E +G+ + V + CI+A LKS GLMSYDPGYMNTAVCTS IT+IDGE+GILRYRGYPIEQLA SS++E AFLLLYGELPS QL+HFCARVY Q A+H D+VALLQTIRHDAH MTS++S LAA SAL +ANPAL GQ VY SR RE QM TLLG FPTLAA +LLRR+GS PC+ PS A LLDP PRAYVEHFL LLGLGKAR + PDPRVVRALD ILL HADHELNCSTAAVRHLTSSG DV+T +AGATGALYGPLHGGATEAVLRMLQ+IGT ERIPAF+EAVKAK+ KLMGFGHRVYKN DPRA LVREVAYEVF VYGADPLIH+ATALE AARSDDYFV+RKLYPNIDFYSGL+YKAIGFP+D+FPVLFTMGRMAGWLAHW+ELL GP EE+KIVRPRQ+YLGP ER ++P++AR GH E L+ S+ RARL Sbjct: 15 VRVESQGRHGVMSVTHNCIKASKLKSTLGLMSYDPGYMNTAVCTSRITFIDGEKGILRYRGYPIEQLASKSSFMETAFLLLYGELPSEAQLKHFCARVYHHQTALHADIVALLQTIRHDAHCMTSVISALAAMSALHPEANPALEGQGVYSSRKTRESQMFTLLGAFPTLAAHVLLRRSGSSVPCLPAPSLATLLDPARPRAYVEHFLVLLGLGKARPGEEGPDPRVVRALDAILLAHADHELNCSTAAVRHLTSSGVDVYTAVAGATGALYGPLHGGATEAVLRMLQQIGTEERIPAFLEAVKAKEAKLMGFGHRVYKNYDPRAVLVREVAYEVFQVYGADPLIHVATALETAARSDDYFVSRKLYPNIDFYSGLVYKAIGFPLDFFPVLFTMGRMAGWLAHWEELLMGPEEEKKIVRPRQIYLGPAERAFLPIEAR--GHVRIAAEPERLLPSTTRARL 473
BLAST of NO19G01880 vs. NCBI_GenBank
Match: XP_002960966.1 (citrate synthase 3, peroxisomal [Selaginella moellendorffii] >EFJ38505.1 hypothetical protein SELMODRAFT_266549 [Selaginella moellendorffii]) HSP 1 Score: 467.6 bits (1202), Expect = 4.500e-128 Identity = 239/446 (53.59%), Postives = 320/446 (71.75%), Query Frame = 0 Query: 11 LVILEYR-GQRHRLPVKN-GCIRAIDLKSA------SGLMSYDPGYMNTAVCTSHITYIDGERGILRYRGYPIEQLAKYSSYLEVAFLLLYGELPSAPQLEHFCARVYQRQAAIHTDLVALLQTIRHDAHSMTSIVSTLAAFSALRADANPALAGQDVYKSRVMREDQMITLLGIFPTLAAQLLLRRTGSEPCITLPSAAMLLDPTNPRAYVEHFLCLLGLGKARASDSRPDPRVVRALDIILLVHADHELNCSTAAVRHLTSSGTDVFTTIAGATGALYGPLHGGATEAVLRMLQEIGTVERIPAFVEAVKAKKRKLMGFGHRVYKNNDPRAQLVREVAYEVFDVYGADPLIHLATALEAAARSDDYFVARKLYPNIDFYSGLIYKAIGFPVDYFPVLFTMGRMAGWLAHWDELLAGPLEEQKIVRPRQVYLGPIERPYVPLDAR 449 L +++ R G+++ + + G + A D K +GL YDPGY+NTA S I+YIDG++GILRYRGYPIE+LA++S+YLEVA+LL+YG LP+ QL + A + Q +A+ ++A++ + HDAH M ++V ++ A S+ DANPAL GQD+YKS+ +R+ Q++ ++G PTLAA LR G P + P+N +Y E+FL +L R + RP+PR+ RALDI+ ++HA+HE+NCSTAA RHL SSG DV+T IAGATGALYGPLHGGA EAVL+ML EIGTVE+IP F+E VK +KRKL GFGHRVYKN DPRA++++ ++ EVF + G DPLI +A ALE AA SDDYFV RKLYPN+DFYSGLIY+A+GFP ++FPVLF + RMAG+LAHW E L P + KI+RP+Q Y+G R Y+PL R Sbjct: 45 LTVVDNRTGKKYEFAISDGGTVNATDFKKIKAEGDDNGLKLYDPGYLNTAPVRSSISYIDGDKGILRYRGYPIEELAEHSTYLEVAYLLMYGYLPTKAQLSDWEATIMQ-HSALPEGVLAVISDLPHDAHPMGTLVGSICALSSFHPDANPALRGQDLYKSKPVRDKQIVRIIGKVPTLAAAAYLRMAGRHP----------VAPSNSLSYAENFLYMLDSMGDR--NYRPNPRLARALDILFILHAEHEMNCSTAAARHLASSGVDVYTAIAGATGALYGPLHGGANEAVLKMLSEIGTVEKIPEFIEGVKNRKRKLSGFGHRVYKNYDPRAKVIKNLSEEVFSIVGRDPLIEVAVALERAALSDDYFVKRKLYPNVDFYSGLIYRALGFPSEFFPVLFAVPRMAGYLAHWKESLDDP--DTKIMRPQQWYIGEWLRKYIPLSNR 475
BLAST of NO19G01880 vs. NCBI_GenBank
Match: XP_024528054.1 (citrate synthase 3, peroxisomal [Selaginella moellendorffii]) HSP 1 Score: 467.6 bits (1202), Expect = 4.500e-128 Identity = 239/446 (53.59%), Postives = 320/446 (71.75%), Query Frame = 0 Query: 11 LVILEYR-GQRHRLPVKN-GCIRAIDLKSA------SGLMSYDPGYMNTAVCTSHITYIDGERGILRYRGYPIEQLAKYSSYLEVAFLLLYGELPSAPQLEHFCARVYQRQAAIHTDLVALLQTIRHDAHSMTSIVSTLAAFSALRADANPALAGQDVYKSRVMREDQMITLLGIFPTLAAQLLLRRTGSEPCITLPSAAMLLDPTNPRAYVEHFLCLLGLGKARASDSRPDPRVVRALDIILLVHADHELNCSTAAVRHLTSSGTDVFTTIAGATGALYGPLHGGATEAVLRMLQEIGTVERIPAFVEAVKAKKRKLMGFGHRVYKNNDPRAQLVREVAYEVFDVYGADPLIHLATALEAAARSDDYFVARKLYPNIDFYSGLIYKAIGFPVDYFPVLFTMGRMAGWLAHWDELLAGPLEEQKIVRPRQVYLGPIERPYVPLDAR 449 L +++ R G+++ + + G + A D K +GL YDPGY+NTA S I+YIDG++GILRYRGYPIE+LA++S+YLEVA+LL+YG LP+ QL + A + Q +A+ ++A++ + HDAH M ++V ++ A S+ DANPAL GQD+YKS+ +R+ Q++ ++G PTLAA LR G P + P+N +Y E+FL +L R + RP+PR+ RALDI+ ++HA+HE+NCSTAA RHL SSG DV+T IAGATGALYGPLHGGA EAVL+ML EIGTVE+IP F+E VK +KRKL GFGHRVYKN DPRA++++ ++ EVF + G DPLI +A ALE AA SDDYFV RKLYPN+DFYSGLIY+A+GFP ++FPVLF + RMAG+LAHW E L P + KI+RP+Q Y+G R Y+PL R Sbjct: 45 LTVVDNRTGKKYEFAISDGGTVNATDFKKIKAEGDDNGLKLYDPGYLNTAPVRSSISYIDGDKGILRYRGYPIEELAEHSTYLEVAYLLMYGYLPTKAQLSDWEATIMQ-HSALPEGVLAVISDLPHDAHPMGTLVGSICALSSFHPDANPALRGQDLYKSKPVRDKQIVRIIGKVPTLAAAAYLRMAGRHP----------VAPSNSLSYAENFLYMLDSMGDR--NYRPNPRLARALDILFILHAEHEMNCSTAAARHLASSGVDVYTAIAGATGALYGPLHGGANEAVLKMLSEIGTVEKIPEFIEGVKNRKRKLSGFGHRVYKNYDPRAKVIKNLSEEVFSIVGRDPLIEVAVALERAALSDDYFVKRKLYPNVDFYSGLIYRALGFPSEFFPVLFAVPRMAGYLAHWKESLDDP--DTKIMRPQQWYIGEWLRKYIPLSNR 475
BLAST of NO19G01880 vs. NCBI_GenBank
Match: XP_003291998.1 (citrate synthase [Dictyostelium purpureum] >EGC31493.1 citrate synthase [Dictyostelium purpureum]) HSP 1 Score: 465.7 bits (1197), Expect = 1.700e-127 Identity = 240/437 (54.92%), Postives = 307/437 (70.25%), Query Frame = 0 Query: 18 GQRHRLPVKNGCIRAIDLKSAS------GLMSYDPGYMNTAVCTSHITYIDGERGILRYRGYPIEQLAKYSSYLEVAFLLLYGELPSAPQLEHFCARVYQRQAAIHTDLVALLQTIRHDAHSMTSIVSTLAAFSALRADANPALAGQDVYKSRVMREDQMITLLGIFPTLAAQLLLRRTGSEPCITLPSAAMLLDPTNPRAYVEHFLCLLGLGKARASDSRPDPRVVRALDIILLVHADHELNCSTAAVRHLTSSGTDVFTTIAGATGALYGPLHGGATEAVLRMLQEIGTVERIPAFVEAVKAKKRKLMGFGHRVYKNNDPRAQLVREVAYEVFDVYGADPLIHLATALEAAARSDDYFVARKLYPNIDFYSGLIYKAIGFPVDYFPVLFTMGRMAGWLAHWDELLAGPLEEQKIVRPRQVYLGPIERPYVPLDAR 449 G+ +KNG + A + K S GLM YDPG+ NTAV TS+ITYIDG++GILRYRGYPIE+LA+ S++LEVA+LL+ G LP+ QL+ + ++ +H +LV L++T R+DAH M ++ST+AA ++NPALAGQD++KS R Q+ ++G PT+AA R G P T P N Y E+FL + L K +D +P+P + RAL+I+ ++HADHELNCSTAA+RH++SSGTD +T++AGA GALYGPLHGGA EAVL ML IGT E IP F+ VKAKK+KLMGFGHR+YKN DPRA+++R VAYEVF+ G +PLI +AT LE A SD+YFV+RKLYPN+DFYSGLIYKA+GFP D FPVLFT+ R GWLAHW E L P E KI RPRQVY G R YVP++ R Sbjct: 46 GKNFEFKIKNGTVNATNFKQLSENKEDGGLMIYDPGFQNTAVVTSYITYIDGDKGILRYRGYPIEELAERSTFLEVAYLLINGNLPNKSQLDGWSHKI-MTHTFLHENLVGLMKTFRYDAHPMGMLISTVAALGTFYPESNPALAGQDIFKSESARNKQIYRIVGKLPTIAACAWRHRIG-RPYNT---------PVNHLGYTENFLYM--LDKLSENDYKPNPVLCRALEILFILHADHELNCSTAAMRHISSSGTDPYTSVAGAAGALYGPLHGGANEAVLDMLVHIGTKENIPQFIADVKAKKKKLMGFGHRIYKNYDPRAKIIRRVAYEVFESLGKEPLIEVATELEKQALSDEYFVSRKLYPNVDFYSGLIYKAMGFPTDMFPVLFTIPRAVGWLAHWVEHLEDP--ETKIYRPRQVYKGEWFRNYVPIEGR 467
BLAST of NO19G01880 vs. NCBI_GenBank
Match: XP_006448012.1 (citrate synthase, glyoxysomal [Citrus clementina] >XP_006492249.1 PREDICTED: citrate synthase, glyoxysomal [Citrus sinensis] >ESR61252.1 hypothetical protein CICLE_v10014944mg [Citrus clementina] >KDO58597.1 hypothetical protein CISIN_1g010304mg [Citrus sinensis] >GAY51750.1 hypothetical protein CUMW_136650 [Citrus unshiu]) HSP 1 Score: 463.4 bits (1191), Expect = 8.500e-127 Identity = 240/444 (54.05%), Postives = 314/444 (70.72%), Query Frame = 0 Query: 12 VILEYRGQRHRLPV-KNGCIRAIDLKSAS------GLMSYDPGYMNTAVCTSHITYIDGERGILRYRGYPIEQLAKYSSYLEVAFLLLYGELPSAPQLEHFCARVYQRQAAIHTDLVALLQTIRHDAHSMTSIVSTLAAFSALRADANPALAGQDVYKSRVMREDQMITLLGIFPTLAAQLLLRRTGSEPCITLPSAAMLLDPTNPRAYVEHFLCLLGLGKARASDSRPDPRVVRALDIILLVHADHELNCSTAAVRHLTSSGTDVFTTIAGATGALYGPLHGGATEAVLRMLQEIGTVERIPAFVEAVKAKKRKLMGFGHRVYKNNDPRAQLVREVAYEVFDVYGADPLIHLATALEAAARSDDYFVARKLYPNIDFYSGLIYKAIGFPVDYFPVLFTMGRMAGWLAHWDELLAGPLEEQKIVRPRQVYLGPIERPYVPLDAR 449 V+ E G+R+++PV + G ++A D K + GL YDPGY+NTA S I YIDG+ GILRYRGYPIE+LA+ SS+LEVA+LL+YG LPS QL + V Q +A+ ++ ++Q + HDAH M +VS ++A S DANPAL GQD+YKS+ +R+ Q+ +LG PT+AA LR G P + P+N +Y E+FL +L RA +P+PR+ R LD++ ++HA+HE+NCST+A RHL SSG DV+T +AGA GALYGPLHGGA EAVL+ML EIGTVE IP F+E VK +KRK+ GFGHRVYKN DPRA+++R++A EVF + G DPLI +A ALE AA SD+YFV RKLYPN+DFYSGLIY+A+GFP ++FPVLF + RMAG+LAHW E L P + KI+RP+QVY G R Y+PL R Sbjct: 58 VVDERTGKRYQIPVSQEGTVKATDFKKITTGKNDKGLKLYDPGYLNTAPVRSSICYIDGDEGILRYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDWEFAVSQ-HSAVPQGILDIIQAMPHDAHPMGVLVSAMSALSIFHPDANPALKGQDIYKSKQVRDKQIARILGKAPTIAAAAYLRMAGRPPVL----------PSNNLSYSENFLYMLDSLGNRA--YKPNPRLARVLDVLFILHAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVLKMLNEIGTVENIPEFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIRKLAEEVFSIVGRDPLIEVAVALEKAALSDEYFVKRKLYPNVDFYSGLIYRAMGFPTEFFPVLFAIPRMAGYLAHWRESLDDP--DTKIMRPQQVYTGVWMRHYMPLKER 486
BLAST of NO19G01880 vs. NCBI_GenBank
Match: XP_020438535.1 (citrate synthase [Heterostelium album PN500] >EFA86430.1 citrate synthase [Heterostelium album PN500]) HSP 1 Score: 462.6 bits (1189), Expect = 1.500e-126 Identity = 238/450 (52.89%), Postives = 312/450 (69.33%), Query Frame = 0 Query: 6 VEADQLVILEYR-GQRHRLPVKNGCIRAIDLKSAS------GLMSYDPGYMNTAVCTSHITYIDGERGILRYRGYPIEQLAKYSSYLEVAFLLLYGELPSAPQLEHFCARVYQRQAAIHTDLVALLQTIRHDAHSMTSIVSTLAAFSALRADANPALAGQDVYKSRVMREDQMITLLGIFPTLAAQLLLRRTGSEPCITLPSAAMLLDPTNPRAYVEHFLCLLGLGKARASDSRPDPRVVRALDIILLVHADHELNCSTAAVRHLTSSGTDVFTTIAGATGALYGPLHGGATEAVLRMLQEIGTVERIPAFVEAVKAKKRKLMGFGHRVYKNNDPRAQLVREVAYEVFDVYGADPLIHLATALEAAARSDDYFVARKLYPNIDFYSGLIYKAIGFPVDYFPVLFTMGRMAGWLAHWDELLAGPLEEQKIVRPRQVYLGPIERPYVPLDAR 449 V+ D + + + R G+ + +P+K+ I A+ + S GLM YDPG+ NTAV TS ITYIDG++GILRYRGYPIE+LA+ SS+LEVA+LL+ G LP+ QL+ + R+ +H +LV +++T R+DAH M ++ST+AA +ANPAL GQD++KS +R Q++ ++G PT+AA R G P T P N Y E+FL + L K D +P+P + RAL+I+ ++HADHELNCSTAA+RH+ SSGTD +T++AGA GALYGP HGGA EAVL MLQ+IG + +P F+ VKAKK+KLMGFGHR+YKN DPRA+++R VAYEVFD G +PLI +AT LE A +D+YF+ RKLYPN+DFYSGLIYKA+GFP D FPVLFT+ R GWLAHW E P E KI RPRQVY G R YVP++ R Sbjct: 35 VKKDSITVTDNRTGKTYNVPIKDLTINALAFREVSETAGDNGLMVYDPGFQNTAVVTSTITYIDGDKGILRYRGYPIEELAERSSFLEVAYLLINGNLPNKVQLDSWSNRI-MTHTFLHENLVGMMKTFRYDAHPMGMLISTVAALGTFYPEANPALVGQDIFKSESVRNKQILRIVGKLPTIAACAWRHRIG-RPYNT---------PVNHLGYTENFLYM--LDKLSEQDYKPNPVLCRALEILFILHADHELNCSTAAMRHIASSGTDPYTSVAGAAGALYGPSHGGANEAVLDMLQQIGAKDNVPQFIADVKAKKKKLMGFGHRIYKNYDPRAKIIRRVAYEVFDSLGKEPLIEVATELEKQALNDEYFIQRKLYPNVDFYSGLIYKAMGFPTDMFPVLFTIPRAVGWLAHWIEHCEDP--ETKIYRPRQVYKGEWFRNYVPIEGR 469
BLAST of NO19G01880 vs. NCBI_GenBank
Match: XP_005704031.1 (citrate synthase [Galdieria sulphuraria] >EME27511.1 citrate synthase [Galdieria sulphuraria]) HSP 1 Score: 462.2 bits (1188), Expect = 1.900e-126 Identity = 239/437 (54.69%), Postives = 309/437 (70.71%), Query Frame = 0 Query: 12 VILEYRGQRHRLPVKNGCIRAIDLKSASGLMSYDPGYMNTAVCTSHITYIDGERGILRYRGYPIEQLAKYSSYLEVAFLLLYGELPSAPQLEHFCARVYQRQAAIHTDLVALLQTIRHDAHSMTSIVSTLAAFSALRADANPALAGQDVYKSRVMREDQMITLLGIFPTLAAQLLLRRTGSEPCITLPSAAMLLDPTNPRAYVEHFLCLLGLGKARASDSRPDPRVVRALDIILLVHADHELNCSTAAVRHLTSSGTDVFTTIAGATGALYGPLHGGATEAVLRMLQEIGTVERIPAFVEAVKAKKRKLMGFGHRVYKNNDPRAQLVREVAYEVFDVYGADPLIHLATALEAAARSDDYFVARKLYPNIDFYSGLIYKAIGFPVDYFPVLFTMGRMAGWLAHWDELLAGPLEEQKIVRPRQVYLGPIERPYVPLDAR 449 VI GQ L + N IRA+DL + G+ YDPG++NTA C S ITYIDG++GILRYRGYPIE+LA+ S+++EV+FLLLYGELP++ +LEHF RV R + LV +++ ++H M +VS LAA L DANPA++G DVY S +RE Q++ LLG PTLAA + + G P+ R+Y E+F+ + L RP+ +V+ALD + ++HADHELNCSTAAVRHLTSS DVFT +GA GALYGPLHGGA EAVLRML+ IG+VE++PAF+EAVK +K +LMGFGHRVYKN DPRA++VR++AY+VF++ G DPLI +AT LE A D+YF+ RKLYPN+DFYSGLIYKA+GFP D+F +LF +GR GWLAHW E L P ++KI RP+Q YLG +R Y+PL R Sbjct: 29 VIDNQTGQELTLELHNNTIRAVDL-AKLGVTVYDPGFLNTASCISRITYIDGDKGILRYRGYPIEELAEKSTFMEVSFLLLYGELPTSRELEHFTHRVL-RHTFLKQSLVDIIKATPKESHPMGLLVSMLAAEGTLYPDANPAISGGDVYNSPRVREKQILRLLGTMPTLAAFVYRHKMGRP--FNYPAYG------GSRSYTENFMYM--LDSMEDPSYRPNATLVKALDTLFVLHADHELNCSTAAVRHLTSSDVDVFTAFSGAAGALYGPLHGGANEAVLRMLERIGSVEKVPAFIEAVKNRKARLMGFGHRVYKNYDPRARIVRKLAYQVFEICGKDPLIEIATTLEEHALKDNYFIERKLYPNVDFYSGLIYKAMGFPTDFFTILFAIGRTPGWLAHWLEYLDDP--DKKIARPKQNYLGSDQRSYIPLTQR 451
BLAST of NO19G01880 vs. NCBI_GenBank
Match: KDP26979.1 (hypothetical protein JCGZ_22095 [Jatropha curcas]) HSP 1 Score: 462.2 bits (1188), Expect = 1.900e-126 Identity = 239/445 (53.71%), Postives = 317/445 (71.24%), Query Frame = 0 Query: 12 VILEYRGQRHRLPV-KNGCIRAIDLKSAS------GLMSYDPGYMNTAVCTSHITYIDGERGILRYRGYPIEQLAKYSSYLEVAFLLLYGELPSAPQLEHFCARVYQRQAAIHTDLVALLQTIRHDAHSMTSIVSTLAAFSALRADANPALAGQDVYKSRVMREDQMITLLGIFPTLAAQLLLRRTGSEPCITLPSAAMLLDPTNPRAYVEHFLCLL-GLGKARASDSRPDPRVVRALDIILLVHADHELNCSTAAVRHLTSSGTDVFTTIAGATGALYGPLHGGATEAVLRMLQEIGTVERIPAFVEAVKAKKRKLMGFGHRVYKNNDPRAQLVREVAYEVFDVYGADPLIHLATALEAAARSDDYFVARKLYPNIDFYSGLIYKAIGFPVDYFPVLFTMGRMAGWLAHWDELLAGPLEEQKIVRPRQVYLGPIERPYVPLDAR 449 V+ E G+++++PV +NG I+A D K S GL YDPGY+NTA S I+YIDG+ GILRYRGYPIE+LA+ S++LEV++L+LYG LPS QL + + Q +A+ ++ ++Q + HDAH M +VS ++A S DANPAL GQD+YKS+ +R+ Q+ +LG PT+AA LR G P + P++ +Y E+FL +L LG +P+PR+ R LD++ ++HA+HE+NCSTAA RHL SSG DV+T +AGA GALYGPLHGGA EAVL+ML EIGTVE IP F+E VK++KRK+ GFGHRVYKN DPRA+++R++A EVF + G DPLI +A ALE AA SD+YFV RKLYPN+DFYSGLIY+A+GFP ++FPVLF + RMAG+LAHW E L P + KI+RP+QVY G R Y+PL R Sbjct: 61 VVDERTGKKYQIPVSENGTIKASDFKKISTGKNDKGLKLYDPGYLNTAPVQSSISYIDGDEGILRYRGYPIEELAESSTFLEVSYLILYGNLPSENQLADWEFAISQ-HSAVPQGILDIIQAMPHDAHPMGVLVSAMSALSIFHPDANPALRGQDLYKSKQVRDKQIARILGKAPTIAAAAYLRLAGRPPVL----------PSSNLSYAENFLYMLDSLGN---RSYKPNPRLARVLDVLFILHAEHEMNCSTAAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVLKMLSEIGTVENIPDFIEGVKSRKRKMSGFGHRVYKNYDPRAKVIRKLAEEVFSIVGRDPLIEVAVALEKAALSDEYFVKRKLYPNVDFYSGLIYRAMGFPTEFFPVLFAIPRMAGYLAHWRESLDDP--DTKIMRPQQVYTGVWLRHYMPLKER 489
BLAST of NO19G01880 vs. NCBI_GenBank
Match: XP_012084988.2 (citrate synthase, glyoxysomal [Jatropha curcas]) HSP 1 Score: 462.2 bits (1188), Expect = 1.900e-126 Identity = 239/445 (53.71%), Postives = 317/445 (71.24%), Query Frame = 0 Query: 12 VILEYRGQRHRLPV-KNGCIRAIDLKSAS------GLMSYDPGYMNTAVCTSHITYIDGERGILRYRGYPIEQLAKYSSYLEVAFLLLYGELPSAPQLEHFCARVYQRQAAIHTDLVALLQTIRHDAHSMTSIVSTLAAFSALRADANPALAGQDVYKSRVMREDQMITLLGIFPTLAAQLLLRRTGSEPCITLPSAAMLLDPTNPRAYVEHFLCLL-GLGKARASDSRPDPRVVRALDIILLVHADHELNCSTAAVRHLTSSGTDVFTTIAGATGALYGPLHGGATEAVLRMLQEIGTVERIPAFVEAVKAKKRKLMGFGHRVYKNNDPRAQLVREVAYEVFDVYGADPLIHLATALEAAARSDDYFVARKLYPNIDFYSGLIYKAIGFPVDYFPVLFTMGRMAGWLAHWDELLAGPLEEQKIVRPRQVYLGPIERPYVPLDAR 449 V+ E G+++++PV +NG I+A D K S GL YDPGY+NTA S I+YIDG+ GILRYRGYPIE+LA+ S++LEV++L+LYG LPS QL + + Q +A+ ++ ++Q + HDAH M +VS ++A S DANPAL GQD+YKS+ +R+ Q+ +LG PT+AA LR G P + P++ +Y E+FL +L LG +P+PR+ R LD++ ++HA+HE+NCSTAA RHL SSG DV+T +AGA GALYGPLHGGA EAVL+ML EIGTVE IP F+E VK++KRK+ GFGHRVYKN DPRA+++R++A EVF + G DPLI +A ALE AA SD+YFV RKLYPN+DFYSGLIY+A+GFP ++FPVLF + RMAG+LAHW E L P + KI+RP+QVY G R Y+PL R Sbjct: 105 VVDERTGKKYQIPVSENGTIKASDFKKISTGKNDKGLKLYDPGYLNTAPVQSSISYIDGDEGILRYRGYPIEELAESSTFLEVSYLILYGNLPSENQLADWEFAISQ-HSAVPQGILDIIQAMPHDAHPMGVLVSAMSALSIFHPDANPALRGQDLYKSKQVRDKQIARILGKAPTIAAAAYLRLAGRPPVL----------PSSNLSYAENFLYMLDSLGN---RSYKPNPRLARVLDVLFILHAEHEMNCSTAAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVLKMLSEIGTVENIPDFIEGVKSRKRKMSGFGHRVYKNYDPRAKVIRKLAEEVFSIVGRDPLIEVAVALEKAALSDEYFVKRKLYPNVDFYSGLIYRAMGFPTEFFPVLFAIPRMAGYLAHWRESLDDP--DTKIMRPQQVYTGVWLRHYMPLKER 533
BLAST of NO19G01880 vs. NCBI_GenBank
Match: XP_024185232.1 (citrate synthase, glyoxysomal [Rosa chinensis] >PRQ52006.1 putative transferase [Rosa chinensis]) HSP 1 Score: 461.5 bits (1186), Expect = 3.200e-126 Identity = 241/444 (54.28%), Postives = 315/444 (70.95%), Query Frame = 0 Query: 12 VILEYRGQRHRLPV-KNGCIRAIDLKSAS------GLMSYDPGYMNTAVCTSHITYIDGERGILRYRGYPIEQLAKYSSYLEVAFLLLYGELPSAPQLEHFCARVYQRQAAIHTDLVALLQTIRHDAHSMTSIVSTLAAFSALRADANPALAGQDVYKSRVMREDQMITLLGIFPTLAAQLLLRRTGSEPCITLPSAAMLLDPTNPRAYVEHFLCLLGLGKARASDSRPDPRVVRALDIILLVHADHELNCSTAAVRHLTSSGTDVFTTIAGATGALYGPLHGGATEAVLRMLQEIGTVERIPAFVEAVKAKKRKLMGFGHRVYKNNDPRAQLVREVAYEVFDVYGADPLIHLATALEAAARSDDYFVARKLYPNIDFYSGLIYKAIGFPVDYFPVLFTMGRMAGWLAHWDELLAGPLEEQKIVRPRQVYLGPIERPYVPLDAR 449 V+ E G+R+++ V + G ++A DLK S GL YDPGY+NTA S I YIDG+ GILRYRGYPIE+LA+ S+YLEVA+LL+YG LPS QL + V Q +A+ ++ ++Q I HDAH M +VS ++A S DANPAL GQD+Y+S+ +R+ Q+ +LG PT+AA LR G P + P+N +Y E+FL +L RA +P+PR+ R LDI+ ++HA+HE+NCSTAA RHL SSG DV+T ++GA GALYGPLHGGA EAVL+ML EIG+VE IP F+E VK++KRK+ GFGHRVYKN DPRA+++R++A EVF + G DPLI +A ALE AA SD+YFV RKLYPN+DFYSGLIY+A+GFP ++FPVLF + RMAG+LAHW E L P + KI+RP QVY+G R Y+PL R Sbjct: 52 VVDERTGKRYQVQVSEQGTVKATDLKKISTGKNDKGLKLYDPGYLNTAPVRSSICYIDGDEGILRYRGYPIEELAESSTYLEVAYLLMYGNLPSQSQLADWEFAVTQ-HSAVPQGILDIIQAIPHDAHPMGVLVSAMSALSVFHPDANPALRGQDLYQSKQVRDKQIARILGKAPTIAAAAYLRLAGRPPVL----------PSNNLSYSENFLYMLDSLGDRA--YKPNPRLARVLDILFILHAEHEMNCSTAAARHLASSGVDVYTALSGAVGALYGPLHGGANEAVLKMLSEIGSVENIPEFIEGVKSRKRKMSGFGHRVYKNYDPRAKVIRKLADEVFSIVGRDPLIEVAVALEKAALSDEYFVKRKLYPNVDFYSGLIYRAMGFPTEFFPVLFAIPRMAGYLAHWRESLDDP--DTKIMRPAQVYVGEWLRHYMPLKER 480 The following BLAST results are available for this feature:
BLAST of NO19G01880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G01880 ID=NO19G01880|Name=NO19G01880|organism=Nannochloropsis oceanica|type=gene|length=4796bpback to top protein sequence of NO19G01880.1 >NO19G01880.1-protein ID=NO19G01880.1-protein|Name=NO19G01880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=472bpback to top Synonyms
Publications
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