jgi.p|Nanoce1779_2|641129, gene_7427 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|641129
Unique Namegene_7427
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_19:490559..493559 -

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Properties
Property NameValue
TranscriptId641215
ProteinId641129
Product nameproteasome subunit beta type 7
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_19supercontigscaffold_19:490559..493559 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004298threonine-type endopeptidase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005839proteasome core complex
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL030ncniL030Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO24G02020NO24G02020Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|641129mRNA_7427-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|641129mRNA_7427Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|641129

>mRNA_7427-protein ID=mRNA_7427-protein|Name=jgi.p|Nanoce1779_2|641129|organism=Nannochloropsis oceanica|type=polypeptide|length=281bp
MSLDRARHCDQMGRISVLKTGTTIAGVVCGDSIVLAADTRSTMGQMVADK
NCEKIHKLGDAMYCCGAGTAADAEQLTAAVRTWLRLEASKSITTIREQTL
PPSRPRSLPRVVAAARGLSRLLGKGGVSAAFVLGGVDATGPSLFQIESDG
TTQKVPFTAMGSGFAAAMSSLSIQEGITLLHAAISSGIMNDLGSGSRVDI
CVIQANGQVDVQEEEEEEEMKKEKKEESLDRNEKEPQDLKQIRLEGTMEG
EGEGMEGGREGGMVLKEWVSGEIDEDVELL*
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Synonyms
Publications