jgi.p|Nanoce1779_2|672704, gene_7393 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|672704
Unique Namegene_7393
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_19:410933..413703 -

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Properties
Property NameValue
TranscriptId672790
ProteinId672704
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_19supercontigscaffold_19:410933..413703 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004112cyclic-nucleotide phosphodiesterase activity
GO:00041153',5'-cyclic-AMP phosphodiesterase activity
GO:0004117calmodulin-dependent cyclic-nucleotide phosphodiesterase activity
GO:0004118cGMP-stimulated cyclic-nucleotide phosphodiesterase activity
GO:0004119cGMP-inhibited cyclic-nucleotide phosphodiesterase activity
GO:0004120photoreceptor cyclic-nucleotide phosphodiesterase activity
GO:0008081phosphoric diester hydrolase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005966cyclic-nucleotide phosphodiesterase complex
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL030ncniL030Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO24G01690NO24G01690Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|672704mRNA_7393-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|672704mRNA_7393Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|672704

>mRNA_7393-protein ID=mRNA_7393-protein|Name=jgi.p|Nanoce1779_2|672704|organism=Nannochloropsis oceanica|type=polypeptide|length=631bp
MSSGNGGDDGGYDSRDRKRRKLILHLLPPHNDAHTLPSSSLCSSSGAGDG
AVNGDSGGATRNNSRDSTSASKKASVGDPHDLTFSDSDDDVQILEPSNST
SGSSSSSSSSSSSTSGGGGARPLKYVASTTAAVKGESSMTCSSNSNSTPF
LPLLPFYLNTVRGLSTHYNELCLGLEDVFSGDYHKAILCNYMYDMAFMFD
VIPRLTSIPWLCVFGDNPESTGVVGRQFPNIATFKPKLKGTPFTWGTHHS
KMALLWYNGGGMGEGRRGGGLRMMVCTANFIEVDWRNKTQGVWVQDFPCL
EEGERDDESEFGKELRDYLLALNGFENEGGEGQGRGHPALVEAIQHDLPR
IDFSSAQAILVPSVPGKFTGRDQNGEWVTKHFERSLLSSSSSSSSSSSSS
SSCPSYLVWPRLVDVEASLEGVAAGGAIPCPPKNMFVNSPLSEHARMNAI
HPYLKERLSRWEAGRWGRQRAMPHLKSFLRFSTEKGSEGGGRGGGGGGGG
GGGGGGGGGGITRLAWMLMGSHNYSKPAWGDLQSKGEVFKIQSFEMGVLF
LHSRYTRFARTFSLTPFHPLLGLGAPAQENITGFYSASCEEARNGGGEEG
KEGLLAFPIPYECPPPRYGSGDVPWVSPLY*
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Synonyms
Publications