NO24G01690, NO24G01690 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO24G01690 vs. NCBI_GenBank
Match: EWM24376.1 (tyrosyl-dna phosphodiesterase, partial [Nannochloropsis gaditana]) HSP 1 Score: 253.1 bits (645), Expect = 1.800e-63 Identity = 114/193 (59.07%), Postives = 140/193 (72.54%), Query Frame = 0 Query: 138 SMTCSSNSNSTPFLPLLPFYLNTVRGLSTHYNELCLGLEDVFSGDYHKAILCNYMYDMAFMFDVIPRLTSIPWLCVFGDNPESTGVVGRQFPNIATFKPKLKGTPFTWGTHHSKMALLWYNGGGMGEGRRGGGLRMMVCTANFIEVDWRNKTQGVWVQDFPCLEEGERDDESEFGKELRDYLLALNGFENEGG 331 S + S+ LPLLPFYL V GLS YN CLGLED+FSG +H+AI+CNYMY+ +F + +PRL SIPWLC++GD ST + FPNIATFKP+ + TPF WGTHHSKMALL Y GG+R+M+CT+NFIEVDW NKTQG+WVQDFP L E ++ D+S FG++LR+YL ALNGFENE G Sbjct: 130 SSSSGGKVGSSASLPLLPFYLGQVCGLSPEYNAQCLGLEDIFSGAFHRAIVCNYMYEWSFFLETLPRLLSIPWLCIYGDENPSTPQISEAFPNIATFKPRFRNTPFAWGTHHSKMALLLYE----------GGIRVMICTSNFIEVDWHNKTQGIWVQDFPKLREEDKADDSLFGRDLREYLQALNGFENECG 312
BLAST of NO24G01690 vs. NCBI_GenBank
Match: XP_005855549.1 (tyrosyl-dna phosphodiesterase 1, partial [Nannochloropsis gaditana CCMP526] >EKU20815.1 tyrosyl-dna phosphodiesterase 1, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 155.6 bits (392), Expect = 3.800e-34 Identity = 75/128 (58.59%), Postives = 93/128 (72.66%), Query Frame = 0 Query: 252 MALLWYNGGGMGEGRRGGGLRMMVCTANFIEVDWRNKTQGVWVQDFPCLEEGERDDESEFGKELRDYLLALNGFENE----GGEGQGRGHPALVEAIQHDLPRIDFSSAQAILVPSVPGKFTGRDQVR 376 MALL Y GG+R+M+CT+NFIEVDW NKTQG+WVQDFP L E ++ D+S FG++LR+YL ALNGFENE G G+GHP L E I+ +LPRIDFSSAQA+L+ SVPGK TG D+ + Sbjct: 1 MALLLYE----------GGIRVMICTSNFIEVDWHNKTQGIWVQDFPKLREEDKADDSLFGRDLREYLQALNGFENECGSRGPHSPGKGHPLLTEMIEQELPRIDFSSAQAVLLASVPGKHTGHDKFK 118
BLAST of NO24G01690 vs. NCBI_GenBank
Match: ETM52538.1 (hypothetical protein L914_03885 [Phytophthora parasitica]) HSP 1 Score: 147.1 bits (370), Expect = 1.400e-31 Identity = 100/331 (30.21%), Postives = 157/331 (47.43%), Query Frame = 0 Query: 139 MTCSSNSNSTPFLPLLPFYLNTVRGLSTHYNELCLGLEDVFSGDYHKAILCNYMYDMAFMFDVIPRLTSIPWLCVFGDNPESTGVVG--RQFPNIATFKPKLKGTPFTWGTHHSKMALLWYNGGGMGEGRRGGGLRMMVCTANFIEVDWRNKTQGVWVQDF--PCLEEGERDDESEFGKELRDYLLALNGFENEGGEGQGRGHPALVEAIQHDLPRIDFSSAQAILVPSVPGKFTGRDQVRPIIAXXXXXXXXXXXXXXXXLPPSTG-IISQFSSLGSHAKNGEWVTKHFERSLXXXXXXXXXXXXXXXPSYLVWPRLVDVEASLEGVAAG 465 + S+ +N+ P L FYLN ++ + +N L D+ G++ + +L NYMYD+ ++F PRLT +P L V G+ + G+ R++ N+ P L P +GTHH+KM + Y+ +R+ + TANF+ DW +KTQG+W QDF L + E ++E D+ + L + + G A V+ +L R DFS+A+ LVPSVPG G+D + +PP+ +I QFSSLGS + +W+ F S +++WP + DV SLEG +G Sbjct: 13 LATSTGANTAP--SELGFYLNRLKTAPSAHNLHAKSLSDLLEGEFSRCLLTNYMYDLPWLFAECPRLTEVPVLLVHGER-DRQGMTKECREYSNVTPVAPPL---PIPYGTHHTKMLVALYS----------EKVRVAIFTANFLSNDWNSKTQGLWYQDFGLKVLADSEDEEEETVSGSSSDFEVDLVHYLSSLG--------APVKLFCAELKRFDFSTARVALVPSVPGVHKGKDMEK------YGHLRVRKLLKMYKIPPTDNPLICQFSSLGS--LDEKWLFGEFAESFLPGKKNISSTSMPIQALHIIWPSVEDVRNSLEGWNSG 311
BLAST of NO24G01690 vs. NCBI_GenBank
Match: ETP22763.1 (hypothetical protein F441_04019 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 147.1 bits (370), Expect = 1.400e-31 Identity = 100/331 (30.21%), Postives = 157/331 (47.43%), Query Frame = 0 Query: 139 MTCSSNSNSTPFLPLLPFYLNTVRGLSTHYNELCLGLEDVFSGDYHKAILCNYMYDMAFMFDVIPRLTSIPWLCVFGDNPESTGVVG--RQFPNIATFKPKLKGTPFTWGTHHSKMALLWYNGGGMGEGRRGGGLRMMVCTANFIEVDWRNKTQGVWVQDF--PCLEEGERDDESEFGKELRDYLLALNGFENEGGEGQGRGHPALVEAIQHDLPRIDFSSAQAILVPSVPGKFTGRDQVRPIIAXXXXXXXXXXXXXXXXLPPSTG-IISQFSSLGSHAKNGEWVTKHFERSLXXXXXXXXXXXXXXXPSYLVWPRLVDVEASLEGVAAG 465 + S+ +N+ P L FYLN ++ + +N L D+ G++ + +L NYMYD+ ++F PRLT +P L V G+ + G+ R++ N+ P L P +GTHH+KM + Y+ +R+ + TANF+ DW +KTQG+W QDF L + E ++E D+ + L + + G A V+ +L R DFS+A+ LVPSVPG G+D + +PP+ +I QFSSLGS + +W+ F S +++WP + DV SLEG +G Sbjct: 13 LATSTGANTAP--SELGFYLNRLKTAPSAHNLHAKSLSDLLEGEFSRCLLTNYMYDLPWLFAECPRLTEVPVLLVHGER-DRQGMTKECREYSNVTPVAPPL---PIPYGTHHTKMLVALYS----------EKVRVAIFTANFLSNDWNSKTQGLWYQDFGLKVLADSEDEEEETVSGSSSDFEVDLVHYLSSLG--------APVKLFCAELKRFDFSTARVALVPSVPGVHKGKDMEK------YGHLRVRKLLKMYKIPPTDNPLICQFSSLGS--LDEKWLFGEFAESFLPGKKIISSTSMPIQALHIIWPSVEDVRNSLEGWNSG 311
BLAST of NO24G01690 vs. NCBI_GenBank
Match: ETI52944.1 (hypothetical protein F443_04041 [Phytophthora parasitica P1569] >ETK92822.1 hypothetical protein L915_03922 [Phytophthora parasitica] >ETL46242.1 hypothetical protein L916_03866 [Phytophthora parasitica] >ETP50755.1 hypothetical protein F442_04023 [Phytophthora parasitica P10297]) HSP 1 Score: 146.4 bits (368), Expect = 2.300e-31 Identity = 100/337 (29.67%), Postives = 156/337 (46.29%), Query Frame = 0 Query: 139 MTCSSNSNSTPFLPLLPFYLNTVRGLSTHYNELCLGLEDVFSGDYHKAILCNYMYDMAFMFDVIPRLTSIPWLCVFGDNPESTGVVG--RQFPNIATFKPKLKGTPFTWGTHHSKMALLWYNGGGMGEGRRGGGLRMMVCTANFIEVDWRNKTQGVWVQDF--PCLEEGERDDESEFGKELRDYLLALNGFENEGGEGQGRGHPALVEAIQHDLPRIDFSSAQAILVPSVPGKFTGRDQVR-------PIIAXXXXXXXXXXXXXXXXLPPSTGIISQFSSLGSHAKNGEWVTKHFERSLXXXXXXXXXXXXXXXPSYLVWPRLVDVEASLEGVAAG 465 + S+ +N+ P L FYLN ++ + +N L D+ G++ + +L NYMYD+ ++F PRLT +P L V G+ + G+ R++ N+ P L P +GTHH+KM + Y+ +R+ + TANF+ DW +KTQG+W QDF L + E ++E D+ + L + + G A V+ +L R DFS+A+ LVPSVPG G+D + I+ P +I QFSSLGS + +W+ F S +++WP + DV SLEG +G Sbjct: 13 LATSTGANTAP--SELGFYLNRLKTAPSAHNLHAKSLSDLLEGEFSRCLLTNYMYDLPWLFAECPRLTEVPVLLVHGER-DRQGMTKECREYSNVTPVAPPL---PIPYGTHHTKMLVALYS----------EKVRVAIFTANFLSNDWNSKTQGLWYQDFGLKVLADSEDEEEETVSGSSSDFEVDLVHYLSSLG--------APVKLFCAELKRFDFSTARVALVPSVPGVHKGKDMEKYGHLRSYSILLTYTLCCMNRLLKMYKIPPTDNPLICQFSSLGS--LDEKWLFGEFAESFLPGKKIISSTSMPIQALHIIWPSVEDVRNSLEGWNSG 323
BLAST of NO24G01690 vs. NCBI_GenBank
Match: ETL99385.1 (hypothetical protein L917_03780 [Phytophthora parasitica]) HSP 1 Score: 146.4 bits (368), Expect = 2.300e-31 Identity = 100/337 (29.67%), Postives = 156/337 (46.29%), Query Frame = 0 Query: 139 MTCSSNSNSTPFLPLLPFYLNTVRGLSTHYNELCLGLEDVFSGDYHKAILCNYMYDMAFMFDVIPRLTSIPWLCVFGDNPESTGVVG--RQFPNIATFKPKLKGTPFTWGTHHSKMALLWYNGGGMGEGRRGGGLRMMVCTANFIEVDWRNKTQGVWVQDF--PCLEEGERDDESEFGKELRDYLLALNGFENEGGEGQGRGHPALVEAIQHDLPRIDFSSAQAILVPSVPGKFTGRDQVR-------PIIAXXXXXXXXXXXXXXXXLPPSTGIISQFSSLGSHAKNGEWVTKHFERSLXXXXXXXXXXXXXXXPSYLVWPRLVDVEASLEGVAAG 465 + S+ +N+ P L FYLN ++ + +N L D+ G++ + +L NYMYD+ ++F PRLT +P L V G+ + G+ R++ N+ P L P +GTHH+KM + Y+ +R+ + TANF+ DW +KTQG+W QDF L + E ++E D+ + L + + G A V+ +L R DFS+A+ LVPSVPG G+D + I+ P +I QFSSLGS + +W+ F S +++WP + DV SLEG +G Sbjct: 13 LATSTGANTAP--SELGFYLNRLKTAPSAHNLHAKSLSDLLEGEFSRCLLTNYMYDLPWLFAECPRLTEVPVLLVHGER-DRQGMTKECREYSNVTPVAPPL---PIPYGTHHTKMLVALYS----------EKVRVAIFTANFLSNDWNSKTQGLWYQDFGLKVLADSEDEEEETVSGSSSDFEVDLVHYLSSLG--------APVKLFCAELKRFDFSTARVALVPSVPGVHKGKDMEKYGHLRSYSILLTYTLCCMNRLLKTYKIPPTDNPLICQFSSLGS--LDEKWLFGEFAESFLPGKKIISSTSMPIQALHIIWPSVEDVRNSLEGWNSG 323
BLAST of NO24G01690 vs. NCBI_GenBank
Match: XP_008901243.1 (hypothetical protein PPTG_08085 [Phytophthora parasitica INRA-310] >ETN13170.1 hypothetical protein PPTG_08085 [Phytophthora parasitica INRA-310]) HSP 1 Score: 146.0 bits (367), Expect = 3.000e-31 Identity = 100/337 (29.67%), Postives = 156/337 (46.29%), Query Frame = 0 Query: 139 MTCSSNSNSTPFLPLLPFYLNTVRGLSTHYNELCLGLEDVFSGDYHKAILCNYMYDMAFMFDVIPRLTSIPWLCVFGDNPESTGVVG--RQFPNIATFKPKLKGTPFTWGTHHSKMALLWYNGGGMGEGRRGGGLRMMVCTANFIEVDWRNKTQGVWVQDF--PCLEEGERDDESEFGKELRDYLLALNGFENEGGEGQGRGHPALVEAIQHDLPRIDFSSAQAILVPSVPGKFTGRDQVR-------PIIAXXXXXXXXXXXXXXXXLPPSTGIISQFSSLGSHAKNGEWVTKHFERSLXXXXXXXXXXXXXXXPSYLVWPRLVDVEASLEGVAAG 465 + S+ +N+ P L FYLN ++ + +N L D+ G++ + +L NYMYD+ ++F PRLT +P L V G+ + G+ R++ N+ P L P +GTHH+KM + Y+ +R+ + TANF+ DW +KTQG+W QDF L + E ++E D+ + L + + G A V+ +L R DFS+A+ LVPSVPG G+D + I+ P +I QFSSLGS + +W+ F S +++WP + DV SLEG +G Sbjct: 13 LATSTGANTAP--SELGFYLNRLKTAPSAHNLHAKSLSDLLEGEFSRCLLTNYMYDLPWLFAECPRLTEVPVLLVHGER-DRQGMTKECREYSNVTPVVPPL---PIPYGTHHTKMLVALYS----------EKVRVAIFTANFLSNDWNSKTQGLWYQDFGLKVLADSEDEEEETVSGSSSDFEVDLVHYLSSLG--------APVKLFCAELKRFDFSTARVALVPSVPGVHKGKDMEKYGHLRSYSILLTYTLCCMNRLLKMYKIPPTDNPLICQFSSLGS--LDEKWLFGEFAESFLPGKKIISSTSMPIQALHIIWPSVEDVRNSLEGWNSG 323
BLAST of NO24G01690 vs. NCBI_GenBank
Match: ETO81657.1 (hypothetical protein F444_04096 [Phytophthora parasitica P1976]) HSP 1 Score: 146.0 bits (367), Expect = 3.000e-31 Identity = 98/328 (29.88%), Postives = 156/328 (47.56%), Query Frame = 0 Query: 142 SSNSNSTPFLPLLPFYLNTVRGLSTHYNELCLGLEDVFSGDYHKAILCNYMYDMAFMFDVIPRLTSIPWLCVFGDNPESTGVVG--RQFPNIATFKPKLKGTPFTWGTHHSKMALLWYNGGGMGEGRRGGGLRMMVCTANFIEVDWRNKTQGVWVQDF--PCLEEGERDDESEFGKELRDYLLALNGFENEGGEGQGRGHPALVEAIQHDLPRIDFSSAQAILVPSVPGKFTGRDQVRPIIAXXXXXXXXXXXXXXXXLPPSTG-IISQFSSLGSHAKNGEWVTKHFERSLXXXXXXXXXXXXXXXPSYLVWPRLVDVEASLEGVAAG 465 ++++ + L L FYLN ++ + +N L D+ G++ + +L NYMYD+ ++F PRLT +P L V G+ + G+ R++ N+ P L P +GTHH+KM + Y+ +R+ + TANF+ DW +KTQG+W QDF L + E ++E D+ + L + + G A V+ +L R DFS+A+ LVPSVPG G+D + +PP+ +I QFSSLGS + +W+ F S +++WP + DV SLEG +G Sbjct: 14 ATSTGANTALSELGFYLNRLKTAPSAHNLHAKSLSDLLEGEFSRCLLTNYMYDLPWLFAECPRLTEVPVLLVHGER-DRQGMTKECREYSNVTPVVPPL---PIPYGTHHTKMLVALYS----------EKVRVAIFTANFLSNDWNSKTQGLWYQDFGLKVLADSEDEEEETVSGSSSDFEVDLVHYLSSLG--------APVKLFCAELKRFDFSTARVALVPSVPGVHKGKDMEK------YGHLRVRKLLKMYKIPPTDNPLICQFSSLGS--LDEKWLFGEFAESFLPGKKNISSTSMPIQALHIIWPSVEDVRNSLEGWNSG 311
BLAST of NO24G01690 vs. NCBI_GenBank
Match: OWZ18977.1 (Tyrosyl-DNA phosphodiesterase [Phytophthora megakarya]) HSP 1 Score: 145.2 bits (365), Expect = 5.200e-31 Identity = 97/319 (30.41%), Postives = 147/319 (46.08%), Query Frame = 0 Query: 157 YLNTVRGLSTHYNELCLGLEDVFSGDYHKAILCNYMYDMAFMFDVIPRLTSIPWLCVFGDNPESTGVVG--RQFPNIATFKPKLKGTPFTWGTHHSKMALLWYNGGGMGEGRRGGGLRMMVCTANFIEVDWRNKTQGVWVQDFPCLEEGERDDE--------SEFGKELRDYLLALNGFENEGGEGQGRGHPALVEAIQHDLPRIDFSSAQAILVPSVPGKFTGRDQVRPIIAXXXXXXXXXXXXXXXXLPPSTG-IISQFSSLGSHAKNGEWVTKHFERSLXXXXXXXXXXXXXXXPSYLVWPRLVDVEASLEGVAAG 465 YL +R +N GL D+ GD+ + +L NYM+D+ ++F PRL +P L V G+ + G+ R++ N+ + P L P +GTHH+KM + Y +R+ + TANF+ DW KTQG+W QDF + +DE SEF +L YL +L A V+ +L R DFS+A+ LVP+VPG G+D + +PP+ +I QFSSLGS + +W+ F S +++WP + DV+ SLEG ++G Sbjct: 155 YLTRLRNAPDAHNLHAKGLNDLLEGDFTRCLLTNYMFDLPWLFAECPRLRDVPVLLVHGER-DRQGMTKECREYANVTSVAPPL---PIPYGTHHTKMLVALY----------PEKVRVAIFTANFLSNDWNTKTQGIWYQDFGLKVLADSEDEEKEAVAGASEFEADLAHYLSSLG---------------APVKVFCGELKRFDFSTARVALVPAVPGVHKGKDMEK------YGHLRVRKLLKMYKVPPTDNPLICQFSSLGS--LDEKWLFGEFAESFLPGKRNISSTSMPTQALHIIWPSVEDVQNSLEGWSSG 436
BLAST of NO24G01690 vs. NCBI_GenBank
Match: GAX95310.1 (Hypothetical protein PINS_003195, partial [Pythium insidiosum]) HSP 1 Score: 142.9 bits (359), Expect = 2.600e-30 Identity = 106/334 (31.74%), Postives = 150/334 (44.91%), Query Frame = 0 Query: 154 LPFYLNTVRGLSTHYNELCLGLEDVFSGDYHKAILCNYMYDMAFMFDVIPRLTSIPWLCVFGD-NPESTGVVGRQFPNIATFKPKLKGTPFTWGTHHSKMALLWYNGGGMGEGRRGGGLRMMVCTANFIEVDWRNKTQGVWVQDFPCLEEGERDDESE-----------------FGKELRDYLLALNGFENEGGEGQGRGHPALVEAIQHDLPRIDFSSAQAILVPSVPGKFTGRDQV---RPIIAXXXXXXXXXXXXXXXXLPPSTG--IISQFSSLGSHAKNGEWVTKHFERSLXXXXXXXXXXXXXXXPSYLVWPRLVDVEASLEGVAAG 465 L F+L ++ +N +GL D+ SG++ + +L NYM D+A++F+ PRL +P + V G + E+ R F + P+L P +GTHH+KM ++ Y +R+ + TANFI +DW NKTQGVW QDF GE D+E E F ++L +YL L A V A +L R DFS+A LVPSVPG TG V + A P + +I QFSSLGS + +W+ F SL ++VWP + DV S+EG AG Sbjct: 57 LGFHLTRLQNAPAAHNLYAVGLSDLLSGEFSRVLLTNYMXDLAWLFNEXPRLADVPVVLVHGXRDREAMQHDCRGFTXVTAVAPRL---PXAYGTHHTKMMVVVY----------PTKVRVAIFTANFIPIDWNNKTQGVWFQDFELATIGEDDEEDERKRADLSAGAGVEPVVDFKRDLVEYLSTLG---------------APVVAFCRELERFDFSTATVALVPSVPGYHTGAGAVVLSGVLSAKDKYGHLRVRRILQHFNVPRSDHPLICQFSSLGS--LDEKWLFGEFAESL-MPRPLPTSTPMPIKSLHIVWPSVDDVRNSIEGWHAG 359 The following BLAST results are available for this feature:
BLAST of NO24G01690 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G01690 ID=NO24G01690|Name=NO24G01690|organism=Nannochloropsis oceanica|type=gene|length=1714bpback to top protein sequence of NO24G01690.1 >NO24G01690.1-protein ID=NO24G01690.1-protein|Name=NO24G01690.1|organism=Nannochloropsis oceanica|type=polypeptide|length=476bpback to top Synonyms
Publications
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