NO24G01690, NO24G01690 (gene) Nannochloropsis oceanica

Overview
NameNO24G01690
Unique NameNO24G01690
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1714
Alignment locationchr24:455521..457234 -

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Properties
Property NameValue
DescriptionTyrosyl-dna phosphodiesterase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:455521..457234 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0006281DNA repair
Vocabulary: Molecular Function
TermDefinition
GO:0008081phosphoric diester hydrolase activity
GO:0008081phosphoric diester hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR010347Tdp1
Homology
BLAST of NO24G01690 vs. NCBI_GenBank
Match: EWM24376.1 (tyrosyl-dna phosphodiesterase, partial [Nannochloropsis gaditana])

HSP 1 Score: 253.1 bits (645), Expect = 1.800e-63
Identity = 114/193 (59.07%), Postives = 140/193 (72.54%), Query Frame = 0
Query:  138 SMTCSSNSNSTPFLPLLPFYLNTVRGLSTHYNELCLGLEDVFSGDYHKAILCNYMYDMAFMFDVIPRLTSIPWLCVFGDNPESTGVVGRQFPNIATFKPKLKGTPFTWGTHHSKMALLWYNGGGMGEGRRGGGLRMMVCTANFIEVDWRNKTQGVWVQDFPCLEEGERDDESEFGKELRDYLLALNGFENEGG 331
            S +      S+  LPLLPFYL  V GLS  YN  CLGLED+FSG +H+AI+CNYMY+ +F  + +PRL SIPWLC++GD   ST  +   FPNIATFKP+ + TPF WGTHHSKMALL Y           GG+R+M+CT+NFIEVDW NKTQG+WVQDFP L E ++ D+S FG++LR+YL ALNGFENE G
Sbjct:  130 SSSSGGKVGSSASLPLLPFYLGQVCGLSPEYNAQCLGLEDIFSGAFHRAIVCNYMYEWSFFLETLPRLLSIPWLCIYGDENPSTPQISEAFPNIATFKPRFRNTPFAWGTHHSKMALLLYE----------GGIRVMICTSNFIEVDWHNKTQGIWVQDFPKLREEDKADDSLFGRDLREYLQALNGFENECG 312          
BLAST of NO24G01690 vs. NCBI_GenBank
Match: XP_005855549.1 (tyrosyl-dna phosphodiesterase 1, partial [Nannochloropsis gaditana CCMP526] >EKU20815.1 tyrosyl-dna phosphodiesterase 1, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 155.6 bits (392), Expect = 3.800e-34
Identity = 75/128 (58.59%), Postives = 93/128 (72.66%), Query Frame = 0
Query:  252 MALLWYNGGGMGEGRRGGGLRMMVCTANFIEVDWRNKTQGVWVQDFPCLEEGERDDESEFGKELRDYLLALNGFENE----GGEGQGRGHPALVEAIQHDLPRIDFSSAQAILVPSVPGKFTGRDQVR 376
            MALL Y           GG+R+M+CT+NFIEVDW NKTQG+WVQDFP L E ++ D+S FG++LR+YL ALNGFENE    G    G+GHP L E I+ +LPRIDFSSAQA+L+ SVPGK TG D+ +
Sbjct:    1 MALLLYE----------GGIRVMICTSNFIEVDWHNKTQGIWVQDFPKLREEDKADDSLFGRDLREYLQALNGFENECGSRGPHSPGKGHPLLTEMIEQELPRIDFSSAQAVLLASVPGKHTGHDKFK 118          
BLAST of NO24G01690 vs. NCBI_GenBank
Match: ETM52538.1 (hypothetical protein L914_03885 [Phytophthora parasitica])

HSP 1 Score: 147.1 bits (370), Expect = 1.400e-31
Identity = 100/331 (30.21%), Postives = 157/331 (47.43%), Query Frame = 0
Query:  139 MTCSSNSNSTPFLPLLPFYLNTVRGLSTHYNELCLGLEDVFSGDYHKAILCNYMYDMAFMFDVIPRLTSIPWLCVFGDNPESTGVVG--RQFPNIATFKPKLKGTPFTWGTHHSKMALLWYNGGGMGEGRRGGGLRMMVCTANFIEVDWRNKTQGVWVQDF--PCLEEGERDDESEFGKELRDYLLALNGFENEGGEGQGRGHPALVEAIQHDLPRIDFSSAQAILVPSVPGKFTGRDQVRPIIAXXXXXXXXXXXXXXXXLPPSTG-IISQFSSLGSHAKNGEWVTKHFERSLXXXXXXXXXXXXXXXPSYLVWPRLVDVEASLEGVAAG 465
            +  S+ +N+ P    L FYLN ++   + +N     L D+  G++ + +L NYMYD+ ++F   PRLT +P L V G+  +  G+    R++ N+    P L   P  +GTHH+KM +  Y+            +R+ + TANF+  DW +KTQG+W QDF    L + E ++E        D+ + L  + +  G        A V+    +L R DFS+A+  LVPSVPG   G+D  +                    +PP+   +I QFSSLGS   + +W+   F  S                  +++WP + DV  SLEG  +G
Sbjct:   13 LATSTGANTAP--SELGFYLNRLKTAPSAHNLHAKSLSDLLEGEFSRCLLTNYMYDLPWLFAECPRLTEVPVLLVHGER-DRQGMTKECREYSNVTPVAPPL---PIPYGTHHTKMLVALYS----------EKVRVAIFTANFLSNDWNSKTQGLWYQDFGLKVLADSEDEEEETVSGSSSDFEVDLVHYLSSLG--------APVKLFCAELKRFDFSTARVALVPSVPGVHKGKDMEK------YGHLRVRKLLKMYKIPPTDNPLICQFSSLGS--LDEKWLFGEFAESFLPGKKNISSTSMPIQALHIIWPSVEDVRNSLEGWNSG 311          
BLAST of NO24G01690 vs. NCBI_GenBank
Match: ETP22763.1 (hypothetical protein F441_04019 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 147.1 bits (370), Expect = 1.400e-31
Identity = 100/331 (30.21%), Postives = 157/331 (47.43%), Query Frame = 0
Query:  139 MTCSSNSNSTPFLPLLPFYLNTVRGLSTHYNELCLGLEDVFSGDYHKAILCNYMYDMAFMFDVIPRLTSIPWLCVFGDNPESTGVVG--RQFPNIATFKPKLKGTPFTWGTHHSKMALLWYNGGGMGEGRRGGGLRMMVCTANFIEVDWRNKTQGVWVQDF--PCLEEGERDDESEFGKELRDYLLALNGFENEGGEGQGRGHPALVEAIQHDLPRIDFSSAQAILVPSVPGKFTGRDQVRPIIAXXXXXXXXXXXXXXXXLPPSTG-IISQFSSLGSHAKNGEWVTKHFERSLXXXXXXXXXXXXXXXPSYLVWPRLVDVEASLEGVAAG 465
            +  S+ +N+ P    L FYLN ++   + +N     L D+  G++ + +L NYMYD+ ++F   PRLT +P L V G+  +  G+    R++ N+    P L   P  +GTHH+KM +  Y+            +R+ + TANF+  DW +KTQG+W QDF    L + E ++E        D+ + L  + +  G        A V+    +L R DFS+A+  LVPSVPG   G+D  +                    +PP+   +I QFSSLGS   + +W+   F  S                  +++WP + DV  SLEG  +G
Sbjct:   13 LATSTGANTAP--SELGFYLNRLKTAPSAHNLHAKSLSDLLEGEFSRCLLTNYMYDLPWLFAECPRLTEVPVLLVHGER-DRQGMTKECREYSNVTPVAPPL---PIPYGTHHTKMLVALYS----------EKVRVAIFTANFLSNDWNSKTQGLWYQDFGLKVLADSEDEEEETVSGSSSDFEVDLVHYLSSLG--------APVKLFCAELKRFDFSTARVALVPSVPGVHKGKDMEK------YGHLRVRKLLKMYKIPPTDNPLICQFSSLGS--LDEKWLFGEFAESFLPGKKIISSTSMPIQALHIIWPSVEDVRNSLEGWNSG 311          
BLAST of NO24G01690 vs. NCBI_GenBank
Match: ETI52944.1 (hypothetical protein F443_04041 [Phytophthora parasitica P1569] >ETK92822.1 hypothetical protein L915_03922 [Phytophthora parasitica] >ETL46242.1 hypothetical protein L916_03866 [Phytophthora parasitica] >ETP50755.1 hypothetical protein F442_04023 [Phytophthora parasitica P10297])

HSP 1 Score: 146.4 bits (368), Expect = 2.300e-31
Identity = 100/337 (29.67%), Postives = 156/337 (46.29%), Query Frame = 0
Query:  139 MTCSSNSNSTPFLPLLPFYLNTVRGLSTHYNELCLGLEDVFSGDYHKAILCNYMYDMAFMFDVIPRLTSIPWLCVFGDNPESTGVVG--RQFPNIATFKPKLKGTPFTWGTHHSKMALLWYNGGGMGEGRRGGGLRMMVCTANFIEVDWRNKTQGVWVQDF--PCLEEGERDDESEFGKELRDYLLALNGFENEGGEGQGRGHPALVEAIQHDLPRIDFSSAQAILVPSVPGKFTGRDQVR-------PIIAXXXXXXXXXXXXXXXXLPPSTGIISQFSSLGSHAKNGEWVTKHFERSLXXXXXXXXXXXXXXXPSYLVWPRLVDVEASLEGVAAG 465
            +  S+ +N+ P    L FYLN ++   + +N     L D+  G++ + +L NYMYD+ ++F   PRLT +P L V G+  +  G+    R++ N+    P L   P  +GTHH+KM +  Y+            +R+ + TANF+  DW +KTQG+W QDF    L + E ++E        D+ + L  + +  G        A V+    +L R DFS+A+  LVPSVPG   G+D  +        I+                  P    +I QFSSLGS   + +W+   F  S                  +++WP + DV  SLEG  +G
Sbjct:   13 LATSTGANTAP--SELGFYLNRLKTAPSAHNLHAKSLSDLLEGEFSRCLLTNYMYDLPWLFAECPRLTEVPVLLVHGER-DRQGMTKECREYSNVTPVAPPL---PIPYGTHHTKMLVALYS----------EKVRVAIFTANFLSNDWNSKTQGLWYQDFGLKVLADSEDEEEETVSGSSSDFEVDLVHYLSSLG--------APVKLFCAELKRFDFSTARVALVPSVPGVHKGKDMEKYGHLRSYSILLTYTLCCMNRLLKMYKIPPTDNPLICQFSSLGS--LDEKWLFGEFAESFLPGKKIISSTSMPIQALHIIWPSVEDVRNSLEGWNSG 323          
BLAST of NO24G01690 vs. NCBI_GenBank
Match: ETL99385.1 (hypothetical protein L917_03780 [Phytophthora parasitica])

HSP 1 Score: 146.4 bits (368), Expect = 2.300e-31
Identity = 100/337 (29.67%), Postives = 156/337 (46.29%), Query Frame = 0
Query:  139 MTCSSNSNSTPFLPLLPFYLNTVRGLSTHYNELCLGLEDVFSGDYHKAILCNYMYDMAFMFDVIPRLTSIPWLCVFGDNPESTGVVG--RQFPNIATFKPKLKGTPFTWGTHHSKMALLWYNGGGMGEGRRGGGLRMMVCTANFIEVDWRNKTQGVWVQDF--PCLEEGERDDESEFGKELRDYLLALNGFENEGGEGQGRGHPALVEAIQHDLPRIDFSSAQAILVPSVPGKFTGRDQVR-------PIIAXXXXXXXXXXXXXXXXLPPSTGIISQFSSLGSHAKNGEWVTKHFERSLXXXXXXXXXXXXXXXPSYLVWPRLVDVEASLEGVAAG 465
            +  S+ +N+ P    L FYLN ++   + +N     L D+  G++ + +L NYMYD+ ++F   PRLT +P L V G+  +  G+    R++ N+    P L   P  +GTHH+KM +  Y+            +R+ + TANF+  DW +KTQG+W QDF    L + E ++E        D+ + L  + +  G        A V+    +L R DFS+A+  LVPSVPG   G+D  +        I+                  P    +I QFSSLGS   + +W+   F  S                  +++WP + DV  SLEG  +G
Sbjct:   13 LATSTGANTAP--SELGFYLNRLKTAPSAHNLHAKSLSDLLEGEFSRCLLTNYMYDLPWLFAECPRLTEVPVLLVHGER-DRQGMTKECREYSNVTPVAPPL---PIPYGTHHTKMLVALYS----------EKVRVAIFTANFLSNDWNSKTQGLWYQDFGLKVLADSEDEEEETVSGSSSDFEVDLVHYLSSLG--------APVKLFCAELKRFDFSTARVALVPSVPGVHKGKDMEKYGHLRSYSILLTYTLCCMNRLLKTYKIPPTDNPLICQFSSLGS--LDEKWLFGEFAESFLPGKKIISSTSMPIQALHIIWPSVEDVRNSLEGWNSG 323          
BLAST of NO24G01690 vs. NCBI_GenBank
Match: XP_008901243.1 (hypothetical protein PPTG_08085 [Phytophthora parasitica INRA-310] >ETN13170.1 hypothetical protein PPTG_08085 [Phytophthora parasitica INRA-310])

HSP 1 Score: 146.0 bits (367), Expect = 3.000e-31
Identity = 100/337 (29.67%), Postives = 156/337 (46.29%), Query Frame = 0
Query:  139 MTCSSNSNSTPFLPLLPFYLNTVRGLSTHYNELCLGLEDVFSGDYHKAILCNYMYDMAFMFDVIPRLTSIPWLCVFGDNPESTGVVG--RQFPNIATFKPKLKGTPFTWGTHHSKMALLWYNGGGMGEGRRGGGLRMMVCTANFIEVDWRNKTQGVWVQDF--PCLEEGERDDESEFGKELRDYLLALNGFENEGGEGQGRGHPALVEAIQHDLPRIDFSSAQAILVPSVPGKFTGRDQVR-------PIIAXXXXXXXXXXXXXXXXLPPSTGIISQFSSLGSHAKNGEWVTKHFERSLXXXXXXXXXXXXXXXPSYLVWPRLVDVEASLEGVAAG 465
            +  S+ +N+ P    L FYLN ++   + +N     L D+  G++ + +L NYMYD+ ++F   PRLT +P L V G+  +  G+    R++ N+    P L   P  +GTHH+KM +  Y+            +R+ + TANF+  DW +KTQG+W QDF    L + E ++E        D+ + L  + +  G        A V+    +L R DFS+A+  LVPSVPG   G+D  +        I+                  P    +I QFSSLGS   + +W+   F  S                  +++WP + DV  SLEG  +G
Sbjct:   13 LATSTGANTAP--SELGFYLNRLKTAPSAHNLHAKSLSDLLEGEFSRCLLTNYMYDLPWLFAECPRLTEVPVLLVHGER-DRQGMTKECREYSNVTPVVPPL---PIPYGTHHTKMLVALYS----------EKVRVAIFTANFLSNDWNSKTQGLWYQDFGLKVLADSEDEEEETVSGSSSDFEVDLVHYLSSLG--------APVKLFCAELKRFDFSTARVALVPSVPGVHKGKDMEKYGHLRSYSILLTYTLCCMNRLLKMYKIPPTDNPLICQFSSLGS--LDEKWLFGEFAESFLPGKKIISSTSMPIQALHIIWPSVEDVRNSLEGWNSG 323          
BLAST of NO24G01690 vs. NCBI_GenBank
Match: ETO81657.1 (hypothetical protein F444_04096 [Phytophthora parasitica P1976])

HSP 1 Score: 146.0 bits (367), Expect = 3.000e-31
Identity = 98/328 (29.88%), Postives = 156/328 (47.56%), Query Frame = 0
Query:  142 SSNSNSTPFLPLLPFYLNTVRGLSTHYNELCLGLEDVFSGDYHKAILCNYMYDMAFMFDVIPRLTSIPWLCVFGDNPESTGVVG--RQFPNIATFKPKLKGTPFTWGTHHSKMALLWYNGGGMGEGRRGGGLRMMVCTANFIEVDWRNKTQGVWVQDF--PCLEEGERDDESEFGKELRDYLLALNGFENEGGEGQGRGHPALVEAIQHDLPRIDFSSAQAILVPSVPGKFTGRDQVRPIIAXXXXXXXXXXXXXXXXLPPSTG-IISQFSSLGSHAKNGEWVTKHFERSLXXXXXXXXXXXXXXXPSYLVWPRLVDVEASLEGVAAG 465
            ++++ +   L  L FYLN ++   + +N     L D+  G++ + +L NYMYD+ ++F   PRLT +P L V G+  +  G+    R++ N+    P L   P  +GTHH+KM +  Y+            +R+ + TANF+  DW +KTQG+W QDF    L + E ++E        D+ + L  + +  G        A V+    +L R DFS+A+  LVPSVPG   G+D  +                    +PP+   +I QFSSLGS   + +W+   F  S                  +++WP + DV  SLEG  +G
Sbjct:   14 ATSTGANTALSELGFYLNRLKTAPSAHNLHAKSLSDLLEGEFSRCLLTNYMYDLPWLFAECPRLTEVPVLLVHGER-DRQGMTKECREYSNVTPVVPPL---PIPYGTHHTKMLVALYS----------EKVRVAIFTANFLSNDWNSKTQGLWYQDFGLKVLADSEDEEEETVSGSSSDFEVDLVHYLSSLG--------APVKLFCAELKRFDFSTARVALVPSVPGVHKGKDMEK------YGHLRVRKLLKMYKIPPTDNPLICQFSSLGS--LDEKWLFGEFAESFLPGKKNISSTSMPIQALHIIWPSVEDVRNSLEGWNSG 311          
BLAST of NO24G01690 vs. NCBI_GenBank
Match: OWZ18977.1 (Tyrosyl-DNA phosphodiesterase [Phytophthora megakarya])

HSP 1 Score: 145.2 bits (365), Expect = 5.200e-31
Identity = 97/319 (30.41%), Postives = 147/319 (46.08%), Query Frame = 0
Query:  157 YLNTVRGLSTHYNELCLGLEDVFSGDYHKAILCNYMYDMAFMFDVIPRLTSIPWLCVFGDNPESTGVVG--RQFPNIATFKPKLKGTPFTWGTHHSKMALLWYNGGGMGEGRRGGGLRMMVCTANFIEVDWRNKTQGVWVQDFPCLEEGERDDE--------SEFGKELRDYLLALNGFENEGGEGQGRGHPALVEAIQHDLPRIDFSSAQAILVPSVPGKFTGRDQVRPIIAXXXXXXXXXXXXXXXXLPPSTG-IISQFSSLGSHAKNGEWVTKHFERSLXXXXXXXXXXXXXXXPSYLVWPRLVDVEASLEGVAAG 465
            YL  +R     +N    GL D+  GD+ + +L NYM+D+ ++F   PRL  +P L V G+  +  G+    R++ N+ +  P L   P  +GTHH+KM +  Y             +R+ + TANF+  DW  KTQG+W QDF      + +DE        SEF  +L  YL +L                A V+    +L R DFS+A+  LVP+VPG   G+D  +                    +PP+   +I QFSSLGS   + +W+   F  S                  +++WP + DV+ SLEG ++G
Sbjct:  155 YLTRLRNAPDAHNLHAKGLNDLLEGDFTRCLLTNYMFDLPWLFAECPRLRDVPVLLVHGER-DRQGMTKECREYANVTSVAPPL---PIPYGTHHTKMLVALY----------PEKVRVAIFTANFLSNDWNTKTQGIWYQDFGLKVLADSEDEEKEAVAGASEFEADLAHYLSSLG---------------APVKVFCGELKRFDFSTARVALVPAVPGVHKGKDMEK------YGHLRVRKLLKMYKVPPTDNPLICQFSSLGS--LDEKWLFGEFAESFLPGKRNISSTSMPTQALHIIWPSVEDVQNSLEGWSSG 436          
BLAST of NO24G01690 vs. NCBI_GenBank
Match: GAX95310.1 (Hypothetical protein PINS_003195, partial [Pythium insidiosum])

HSP 1 Score: 142.9 bits (359), Expect = 2.600e-30
Identity = 106/334 (31.74%), Postives = 150/334 (44.91%), Query Frame = 0
Query:  154 LPFYLNTVRGLSTHYNELCLGLEDVFSGDYHKAILCNYMYDMAFMFDVIPRLTSIPWLCVFGD-NPESTGVVGRQFPNIATFKPKLKGTPFTWGTHHSKMALLWYNGGGMGEGRRGGGLRMMVCTANFIEVDWRNKTQGVWVQDFPCLEEGERDDESE-----------------FGKELRDYLLALNGFENEGGEGQGRGHPALVEAIQHDLPRIDFSSAQAILVPSVPGKFTGRDQV---RPIIAXXXXXXXXXXXXXXXXLPPSTG--IISQFSSLGSHAKNGEWVTKHFERSLXXXXXXXXXXXXXXXPSYLVWPRLVDVEASLEGVAAG 465
            L F+L  ++     +N   +GL D+ SG++ + +L NYM D+A++F+  PRL  +P + V G  + E+     R F  +    P+L   P  +GTHH+KM ++ Y             +R+ + TANFI +DW NKTQGVW QDF     GE D+E E                 F ++L +YL  L                A V A   +L R DFS+A   LVPSVPG  TG   V     + A                  P +   +I QFSSLGS   + +W+   F  SL                 ++VWP + DV  S+EG  AG
Sbjct:   57 LGFHLTRLQNAPAAHNLYAVGLSDLLSGEFSRVLLTNYMXDLAWLFNEXPRLADVPVVLVHGXRDREAMQHDCRGFTXVTAVAPRL---PXAYGTHHTKMMVVVY----------PTKVRVAIFTANFIPIDWNNKTQGVWFQDFELATIGEDDEEDERKRADLSAGAGVEPVVDFKRDLVEYLSTLG---------------APVVAFCRELERFDFSTATVALVPSVPGYHTGAGAVVLSGVLSAKDKYGHLRVRRILQHFNVPRSDHPLICQFSSLGS--LDEKWLFGEFAESL-MPRPLPTSTPMPIKSLHIVWPSVDDVRNSIEGWHAG 359          
The following BLAST results are available for this feature:
BLAST of NO24G01690 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24376.11.800e-6359.07tyrosyl-dna phosphodiesterase, partial [Nannochlor... [more]
XP_005855549.13.800e-3458.59tyrosyl-dna phosphodiesterase 1, partial [Nannochl... [more]
ETM52538.11.400e-3130.21hypothetical protein L914_03885 [Phytophthora para... [more]
ETP22763.11.400e-3130.21hypothetical protein F441_04019 [Phytophthora para... [more]
ETI52944.12.300e-3129.67hypothetical protein F443_04041 [Phytophthora para... [more]
ETL99385.12.300e-3129.67hypothetical protein L917_03780 [Phytophthora para... [more]
XP_008901243.13.000e-3129.67hypothetical protein PPTG_08085 [Phytophthora para... [more]
ETO81657.13.000e-3129.88hypothetical protein F444_04096 [Phytophthora para... [more]
OWZ18977.15.200e-3130.41Tyrosyl-DNA phosphodiesterase [Phytophthora megaka... [more]
GAX95310.12.600e-3031.74Hypothetical protein PINS_003195, partial [Pythium... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL040nonsL040Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR030ncniR030Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR027ngnoR027Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO24G01690.1NO24G01690.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|672704gene_7393Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO24G01690.1NO24G01690.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO24G01690 ID=NO24G01690|Name=NO24G01690|organism=Nannochloropsis oceanica|type=gene|length=1714bp
ATGTCCAGTGGTAATGGTGGTGACGATGGCGGTTACGACAGCAGGGACCG
GAAACGACGCAAGCTTATCCTCCATCTGCTCCCCCCTCACAACGACGCAC
ATACCCTCCCCTCTTCCTCCCTCTGCTCCTCCAGCGGCGCTGGCGATGGC
GCTGTTAACGGTGACAGTGGCGGGGCCACTAGAAACAATAGCAGAGATAG
CACGAGTGCGAGTAAGAAGGCTTCAGTGGGTGACCCCCATGACTTGACCT
TCAGTGACAGCGACGATGATGTGCAAATTCTCGAGCCCTCCAACTCCACT
TCTGGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCACCAGCGGCGG
CGGCGGCGCACGCCCTTTAAAATACGTCGCTTCTACAACTGCTGCGGTCA
AAGGCGAAAGTAGCATGACTTGCAGCAGCAATAGCAATAGCACGCCTTTC
CTCCCTCTCCTCCCCTTCTACCTCAACACGGTCCGTGGGCTGTCCACTCA
TTACAACGAGCTCTGTCTGGGTTTGGAAGACGTGTTCTCTGGCGATTACC
ACAAGGCCATATTATGTAACTATATGTATGACATGGCGTTCATGTTTGAT
GTCATTCCTCGCCTGACAAGCATCCCGTGGCTGTGTGTATTTGGCGATAA
CCCGGAGTCGACGGGGGTAGTAGGGAGGCAATTCCCGAATATCGCAACGT
TTAAACCCAAGTTAAAAGGCACGCCGTTTACATGGGGCACACATCATTCT
AAAATGGCTTTGTTGTGGTACAACGGAGGAGGAATGGGGGAAGGAAGGAG
AGGAGGGGGATTGCGGATGATGGTCTGCACGGCGAACTTTATAGAGGTGG
ACTGGCGGAATAAGACACAGGGGGTGTGGGTGCAAGACTTCCCATGCTTG
GAAGAGGGGGAAAGGGATGACGAAAGTGAATTTGGGAAAGAGCTGAGAGA
TTACCTCCTGGCGCTGAATGGCTTTGAGAATGAGGGTGGGGAAGGGCAAG
gtgaggaggaggggggaaggagggggggcgaggggagggttaggggacgg
gtgggtctcgtacttcacatttgccaccccatgcagtctttttcacttat
gaaccatactcctctccgtccttttctccgtccctccttccctcgctggc
ttctccagGCCGCGGGCACCCTGCACTAGTGGAAGCAATCCAGCACGACC
TTCCCCGCATCGATTTTTCCTCCGCCCAGGCCATCCTCGTTCCTTCCGTC
CCTGGCAAATTTACTGGACGAGATCAAgtgaaatatggacacttaaagtt
acgtcgactccttgaacaagagtacatcccgccctctttcttcgttcctc
cctccctccctccttcgtcctcctcctcgtcctcaacctcctctaaaacc
tacagGTCAGACCCATCATCGCTGTCGTCCCCCCTTCCTCCTCCTCCTCC
TCTTCCTCCCCCTCTCCCTCCCTCCCGCCCTCCACGGGCATCATCTCCCA
ATTCTCTTCTCTGGGCTCCCACGCCAAGAACGGTGAATGGGTCACCAAGC
ATTTCGAACGCTCCCTCCTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCC
TCCTCCTCCTGCCCTTCCTATCTCGTCTGGCCACGCCTGGTCGACGTGGA
GGCTTCTCTCGAAGGCGTAGCAGCAGGGGGGCGATTCCGTGCCCTCCTAA
GAACATGTTTGTGA
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protein sequence of NO24G01690.1

>NO24G01690.1-protein ID=NO24G01690.1-protein|Name=NO24G01690.1|organism=Nannochloropsis oceanica|type=polypeptide|length=476bp
MSSGNGGDDGGYDSRDRKRRKLILHLLPPHNDAHTLPSSSLCSSSGAGDG
AVNGDSGGATRNNSRDSTSASKKASVGDPHDLTFSDSDDDVQILEPSNST
SGSSSSSSSSSSSTSGGGGARPLKYVASTTAAVKGESSMTCSSNSNSTPF
LPLLPFYLNTVRGLSTHYNELCLGLEDVFSGDYHKAILCNYMYDMAFMFD
VIPRLTSIPWLCVFGDNPESTGVVGRQFPNIATFKPKLKGTPFTWGTHHS
KMALLWYNGGGMGEGRRGGGLRMMVCTANFIEVDWRNKTQGVWVQDFPCL
EEGERDDESEFGKELRDYLLALNGFENEGGEGQGRGHPALVEAIQHDLPR
IDFSSAQAILVPSVPGKFTGRDQVRPIIAVVPPSSSSSSSSPSPSLPPST
GIISQFSSLGSHAKNGEWVTKHFERSLLSSSSSSSSSSSSSCPSYLVWPR
LVDVEASLEGVAAGGRFRALLRTCL*
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