jgi.p|Nanoce1779_2|598161, gene_7300 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|598161
Unique Namegene_7300
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_19:162862..164854 +

Link to JBrowse

Properties
Property NameValue
TranscriptId598247
ProteinId598161
Product namePyridoxal phosphate-dependent transferase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_19supercontigscaffold_19:162862..164854 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004069L-aspartate:2-oxoglutarate aminotransferase activity
GO:0016769transferase activity, transferring nitrogenous groups
GO:0003824catalytic activity
GO:0030170pyridoxal phosphate binding
GO:0008483transaminase activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006520cellular amino acid metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL030ncniL030Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO24G00670NO24G00670Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|598161mRNA_7300-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|598161mRNA_7300Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|598161

>mRNA_7300-protein ID=mRNA_7300-protein|Name=jgi.p|Nanoce1779_2|598161|organism=Nannochloropsis oceanica|type=polypeptide|length=461bp
MNGRFKDVPLLPPDAIIDLNRQIMVDTNPCKVDLGVGAYRDSHGKPYILD
VVKAAEARVIADPMYNHEYVPIEGWAPFRLASQQVLFGAAHPVLTAGKLA
TVQALSGTGALRIGFEFLRRHVQQPPVVYLPSHTWGNHLKVVHESGISDV
RKYRYYDPSTLSLDIEGMCADLAAAPAGSIILLHTSGHNPVGFDPSAEDW
QRLARLCMEGGLLPFFDNAYQGYTSGSLEDDAYSVRLFASLGMDLFCACS
FAKNMGLYGERVGALHALVSSPAEAQILVSQFQAIIRPMYSSPPSHYARV
AGLILSDPALSSQWQAELREMAARIQRMRTLFLEALAESGCPGQWGHLAR
QRGMFGFTGLEREEVGRLKKEFSIYMLENGRISLSGFNEGNVAYVARAFA
AVLAGRASTPGAACAARIEEKEGVEVETMAMASSSGRPECEGLGDGRVEM
NASPQNAPHL*
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Synonyms
Publications