jgi.p|Nanoce1779_2|558369, gene_7264 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|558369
Unique Namegene_7264
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_19:85236..87515 -

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Properties
Property NameValue
TranscriptId558455
ProteinId558369
Product namelong-chain-fatty-acid CoA ligase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_19supercontigscaffold_19:85236..87515 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004467long-chain fatty acid-CoA ligase activity
GO:0015645fatty acid ligase activity
GO:0031955short-chain fatty acid-CoA ligase activity
GO:0031956medium-chain fatty acid-CoA ligase activity
GO:0031957very long-chain fatty acid-CoA ligase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL030ncniL030Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO24G00370NO24G00370Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|558369mRNA_7264-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|558369mRNA_7264Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|558369

>mRNA_7264-protein ID=mRNA_7264-protein|Name=jgi.p|Nanoce1779_2|558369|organism=Nannochloropsis oceanica|type=polypeptide|length=699bp
MSLAHAIASPALVKFVPAIWDILAEQCGPYLMLTDPSHITRPSSSSSSSS
SPLTLTFAQARILIHQAAAGLHALGFRKGDHLAFFSENSARWLLMEQGAS
FNGCPTAVRGATAPVEELQYIYDHADCKAVVLQDIALLRKLHTVGGLSSS
LHGPPKLVVILQGAAATKDDLAGVAAELGLDPTTVVTVEELLSVGAKHHP
DYLPPDLTPSDLHTLVFTSGTTGRPKGVMLSHSNLLHQIRHIDLGLNPSP
GDIILSLLPCWHIFERSAELFALARGGSLVYSSVRAFKSDLQTYRPHYLI
VVPRLLENVYKSIKEKLSAGPPAPLGLVVRRLPSSQQQKKSLRLRSFLTP
LLRAASRPLAVLLTLLLYPFAQISDLVVFKKVRKALGGRQKLVVSGGSAL
AKYLEEFYDSAGIPVVSGYGLTETSPVIAVRRAGRRRNLVDGGVVGLPPQ
EVELQVRDVETDRVVGQEGKEGGKPGKAGVVFTRGPQVMQGYYKDEESTR
KAIDNNGWFDTGDLGFINPGTGDLVLTGRAKDVIVLSNGENVEPQPIEDA
VVERSSVIEQCMVVGQDQRYLSALVVVNPLELAARGWMPQTEAERLIELV
GPSAVLLGCAADSATLDKEANKLNANPGLVRKVEKEVAAALLQDPEEFRP
WERVKHVSLLLAPFNVQSGMLTQTLKVKRQSVQEKYRAAIEKLYALRE*
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Synonyms
Publications