NO24G00370, NO24G00370 (gene) Nannochloropsis oceanica

Overview
NameNO24G00370
Unique NameNO24G00370
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2623
Alignment locationchr24:129356..131978 -

Link to JBrowse

Properties
Property NameValue
DescriptionAmp-dependent synthetase and ligase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:129356..131978 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016874ligase activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR000873AMP-dep_Synth/Lig
Homology
BLAST of NO24G00370 vs. NCBI_GenBank
Match: EWM24306.1 (amp-dependent synthetase and ligase [Nannochloropsis gaditana] >EWM24307.1 amp-dependent synthetase and ligase [Nannochloropsis gaditana])

HSP 1 Score: 816.6 bits (2108), Expect = 6.700e-233
Identity = 487/902 (53.99%), Postives = 586/902 (64.97%), Query Frame = 0
Query:    2 KLALHILLLALDFEKIANAFILPLGGHLPQFKVSASQRLVHHLIRAPPLLVAPRPGTTPPDGMLETSTTITI-STSASINSNDRRDAAGHETDPSAL-------IID------NPVAQLRRGDIPTFAWPHPLXXXXXXXXXXXXXXXXXTLPPVDEMSLAHAIASPALVKFVPAIWDILAEQCGPYLMLTDPSH-ITRPSXXXXXXXXXXXXXXAQARILIHQAAAGLHALGFRKGDHLAIFSENSARWLLMEQGASFNGCPTAVRGATAPVEELQYIYDHAD*AE------------GAEGAAATKD----------------DLAGVAA-------ELGLDPTTV------------VTVEELLSVGAKHHPDYLPPDLTPSDLHTLVFTSGTTGRPKGVMLSHSNLLHQIRHIDLGLNPSPGDIILSLLPCWHIFERSAELFALARGGSLVYSSVRAFKSDLQTYRPHYLIVVPRLLENVYKSIKEKLSAGPPARRKLVASLSFLSLLYTRVLKRALGLVVRRLPSSQQ---QKKSLRLRSFLTPLLRAASRPLAVLLTLLLYPFAQISDLVVFKKVRKALGGRQKLVVSGGSALAKYLEEFYDSAGIPV-----------------------------------EVELQVRDVETDRVVGQEGKE--------GGKPGKAGVVFTRGPQVMQGYYKDEESTRKAIDNNGWFDTGDLGFINPGTGDLVLTGRAKDVIVLSNGENVEPQPIEDAVVERSSVIEQCMVVGQDQRYLSALVVVNPLELAARGWMPQTEAERLIELVGPSAVLLGCAADSATLDKEANKLNANPGLVRKVEKEVAAALLQDPEEFRPWERVKHVSLLLAPFNVQSGMLTQTLKVKRQSVQEKYRAAIEKLYA 796
            +LAL ++ L      +++AF+ PL   L Q         V HL+        P     PP G L+T+    + S S S + N  +D++ H+   + L       +ID      NP+  LR+G IP F W  PL                     VD  +L  AIASP L + VP +W +LAE CG + MLTDPSH +  PS              AQA  +I  AAAGLHAL  R+GDH+A FSENSARWLL EQGAS NGCPTAVRGA+A VEELQYIY  AD                  G  ++K                 +  GV +       E GL P +V            V++EELL++GA+H P YLPPDL PSDLHTLVFTSGTTGRPKGVMLSH+NLLHQ+RHIDLG NP PGD++LSLLPCWHIFERS+ELFALARG SLVYSSVRAFK+DLQ YRPHYLIVVPRLLENV++SIK+KLSAG P RR+LVA+LS LSLLYTR LK+ALGLVVRR P+S      ++ L L SF++ L R A RP A L T  L P A ++DL+V+KKVR+ALGGRQKLVVSGGSALA+YLEEFYD+AGIPV                                   EVEL++R +E +R    E +         G   GK G+VFTRGPQVMQGYYKD  STRKA+ ++GW +TGDLG++NPGTGDLVLTGRAKD+IVLSNGENVEPQPIEDAVVER + +EQC+V+G D+R LSALVVV+P  LAARG +P  EAERL  LVGPSAVLLGC  D   LD EA++LNA+  LVR V+KE+AAAL QDPEEFR WE++K++ LLLAPFNVQSG+LTQTLKVKR +VQ+ Y+ AI++LYA
Sbjct:    5 RLALSLIFLVWSVANVSHAFMAPLAVRLRQ------PLHVEHLL--------PARHPEPPGGRLDTARPHEVPSGSPSRHCNAGKDSS-HDYGTATLSEGRHPELIDTHWTQGNPIQLLRQGHIPPFTWTPPLFSPSNATAKKTQDDKSGK-SFVDTAALERAIASPGL-RSVPGMWTVLAEHCGAWNMLTDPSHSVPPPSLAASSSSTPLSLTFAQAHDVIRLAAAGLHALNLRQGDHIAFFSENSARWLLAEQGASLNGCPTAVRGASASVEELQYIYRTADCKAVVLQDLSLLRKLREAGGLSSKHGPPRLVIVLRPPEGMRERQGVGSGGGEGETEGGLGPLSVATLSEEPDCGPTVSLEELLALGARHLPHYLPPDLRPSDLHTLVFTSGTTGRPKGVMLSHANLLHQVRHIDLGRNPLPGDVVLSLLPCWHIFERSSELFALARGASLVYSSVRAFKADLQRYRPHYLIVVPRLLENVHRSIKDKLSAGSPVRRRLVATLSLLSLLYTRALKQALGLVVRR-PASHPPTGSRRHLFLASFVSTLRRLAYRPAAALATCFLLPGALLADLLVWKKVRQALGGRQKLVVSGGSALARYLEEFYDAAGIPVVSGYGLTETSPVIAVRRAGRLRNLVDGGVVGFPPKEVELEIRALEDEREGAPEKRRQERTRKEVGSAEGKVGIVFTRGPQVMQGYYKDPSSTRKAVGDDGWLNTGDLGYLNPGTGDLVLTGRAKDLIVLSNGENVEPQPIEDAVVERCATVEQCLVLGHDKRQLSALVVVSPQGLAARGLLPPVEAERLDALVGPSAVLLGCQGDKTALDMEADRLNADESLVRAVQKEIAAALTQDPEEFRAWEQIKNLHLLLAPFNVQSGLLTQTLKVKRVTVQDYYKEAIDRLYA 888          
BLAST of NO24G00370 vs. NCBI_GenBank
Match: CBJ32681.1 (long chain acyl-CoA synthetase [Ectocarpus siliculosus])

HSP 1 Score: 419.5 bits (1077), Expect = 2.400e-113
Identity = 270/699 (38.63%), Postives = 371/699 (53.08%), Query Frame = 0
Query:  160 VPAIWDILAEQCGPYLMLTDPSH-ITRPSXXXXXXXXXXXXXXAQARILIHQAAAGLHALGFRKGDHLAIFSENSARWLLMEQGASFNGCPTAVRGATAPVEELQYIYDHA------------------D*AEGAEGAAATKDDLAGVAAELGL------------DPTTVVTVEELLSVGAKHHPDYLPPDLTPSDLHTLVFTSGTTGRPKGVMLSHSNLLHQI------RHIDLGLNPSPGDIILSLLPCWHIFERSAELFALARGGSLVYSSVRAFKSDLQTYRPHYLIVVPRLLENVYKSIKEKLSAGPPARRKLVASLSFLSLLYTRVLKRALGLVVR-RLPSSQQQKKSLRLRSFLTPLLRAASRPLAVLLTLLLYPFAQISDLVVFKKVRKALGGRQKLVVSGGSALAKYLEEFYDSAGIPVEVELQVRD--------VETDRVVGQEGK------------EGGKP---GKAGVVFTRGPQVMQGYYKDEESTRKAIDNNGWFDTGDLGFINPGTGDLVLTGRAKDVIVLSNGENVEPQPIEDAVVERSSVIEQCMVVGQDQRYLSALVVVNPLELAARGWMPQTEAERLIELVGPSAVLLGCAADSATLDKEANKLNANPGLVRKVEKEVAAALLQDPEEFRPWERVKHVSLLLAPFNVQSGMLTQTLKVKRQSVQEKYRAAIEKLYALR 798
            +P +WD LA +CG    + DP H    P               ++ R  I   AA L  LG  K D +++FSENS RWL+ EQG    G   AVRGATAPV EL+YIY  +                  +  +G EGA   +     V    G             +   VVT  E L  G         P +  S   TLV+TSGTTG+PKG +L+H+NLLHQ+      R     +NP  GD+ +S+LPCWHIFER+AE F L RG ++ YS+VR FKSDL+ ++PH+LIVVPRLLE ++K ++ +L A     +K   +L+ +S L  +  +R  G V+R   P   ++  S  L     PL  AA +                   +V+ K+R  +GGR K+VVSGGS+L  +LE+F++ AG+ V V   + +        V T+   G  GK            E G+    G+ G +  RGPQVM GY  + E+T   ID +G+FDTGDLG  NP TGDL++TGRAKD IVLSNGENVEPQP+EDA+    S+I+Q M+ GQD+R+L A+V +NPL + A G + Q +A R   L+GP+ +  G A     L     ++   PGL R V  ++ A       E RPWE+V  V +   PF   +G++TQTLK KR  V E++   I+ LYA +
Sbjct:   52 LPEMWDFLAGECGDLTAIVDPVHPPDMPDGKRPPKGSETRLTYSEMRTSIGSMAAALIGLGLEKQDCVSVFSENSYRWLIAEQGIMKAGGCNAVRGATAPVAELRYIYGDSESVGAVVETPKLLKLLVEEGGKGLEGADGAEPRFLMVLFPGGKNGKELQESLNIPESIKVVTFSECLDKGGVLD---AAPVVERSMKATLVYTSGTTGKPKGAVLTHANLLHQVSQNSFDRSEGSPMNPWVGDVFVSILPCWHIFERTAEYFTLTRGVTMGYSNVRNFKSDLKKFKPHFLIVVPRLLETIWKGVQTQLEAKSKGAQKAAGALTRVSSLRMKAARRFSGTVIRDSKPKGPEKALSAVLMGVTLPLKLAAEK-------------------LVWGKIRDGVGGRVKVVVSGGSSLPSFLEDFFEMAGVRVLVGYGLTETSPVIANRVATENTKGTTGKPVPGSEVKIADQETGQQVAVGQTGKILIRGPQVMSGYQNNPEATAAVIDKDGYFDTGDLGRFNPITGDLIVTGRAKDTIVLSNGENVEPQPLEDAISGACSLIDQVMLFGQDERFLGAIVCLNPLNMGAAGIISQEDASRYSGLLGPTPLTTGPAGTPKELADAEKEILGAPGLERAVMDQLKAV----AGEERPWEQVGSVIMKFEPFTTSNGLITQTLKTKRNVVAERFSKEIDALYAAK 724          
BLAST of NO24G00370 vs. NCBI_GenBank
Match: WP_017292788.1 (long-chain fatty acid--CoA ligase [Geminocystis herdmanii])

HSP 1 Score: 392.5 bits (1007), Expect = 3.100e-105
Identity = 250/670 (37.31%), Postives = 371/670 (55.37%), Query Frame = 0
Query:  163 IWDILAEQCGPYLMLTDPSHITRPSXXXXXXXXXXXXXXAQARILIHQAAAGLHALGFRKGDHLAIFSENSARWLLMEQGASFNGCPTAVRGATAPVEELQYIYDHAD*AEGAEGAAATKDDLAGVAAELGLDPTTVVTVE--------------ELLSVGAKHHPDYLPPDLTPSDLHTLVFTSGTTGRPKGVMLSHSNLLHQIRHIDLGLNPSPGDIILSLLPCWHIFERSAELFALARGGSLVYSSVRAFKSDLQTYRPHYLIVVPRLLENVYKSIKEKLSAGPPARRKLVASLSFLSLLYTRVLKRALGLVVRRLPSSQQQKKSLRLRSFLTPLLRAASRPLAVLLTLLLYPFAQISDLVVFKKVRKALGGRQKLVVSGGSALAKYLEEFYDSAGIPVEVELQVRD----------------------VETD-RVVGQEGKEGGKPGKAGVVFTRGPQVMQGYYKDEESTRKAIDNNGWFDTGDLGFINPGTGDLVLTGRAKDVIVLSNGENVEPQPIEDAVVERSSVIEQCMVVGQDQRYLSALVVVNPLELAARGWMPQTEAERLIELVGPSAVLLGCAADSATLDK-EANKLNANPGLVRKVEKEVAAALLQDPEEFRPWERVKHVSLLLAPFNVQSGMLTQTLKVKRQSVQEKYRAAIEKLY 795
            IWD++  Q G  + L+DP   ++P                     I Q A+GL +LG   G+ +A+F++NS RWL+ +QG   NGC  AVR + A  +EL YI  H+D         AT   L     E  L    +++ E              + + +GA +   + P      DL TL++TSGTTG+PKGVMLSH NLLHQ+R+++  + P PGD ILS+LP WH +ER+AE F L+RG +L+Y+++R FK DL+ YRPH+++ VPRL E++Y+ ++++   G   ++K+V+    +S  Y    + A GL +  L  S  +K +                  A +  LLL P  ++ D +V++K+R  +GG  K  +SGG +LAK+++ F+   GIP+ V   + +                       ET+ +++  E K+    GK G+V  +G QVMQGYYK+ E+T KAID+ GWFD+GDLG + P   DLV+TGRAKD IVLSNGEN+EPQP+EDA V RS  I+Q MVVGQDQ+YL AL+V N L+ A + W         + L  P A        SAT+D  E + L A    V  + K+  A  +++   +RP +R+    L+L PF++ +GM+TQTLK+KR  +   Y+  I  ++
Sbjct:   17 IWDLVVSQFGDIIALSDPH--SQPKVELNYREVDRN---------IKQFASGLQSLGVESGEKIALFADNSPRWLMADQGIIRNGCVDAVRSSQADRKELLYILGHSDSTVLVIQDLATLKKLEPELKEFSLKSIVLLSDEAIETEFAQPIYNFQQFMELGANN--TFTPVSQDIDDLATLIYTSGTTGQPKGVMLSHRNLLHQVRYLETVIKPLPGDRILSILPSWHSYERAAEYFLLSRGTTLIYTNIRYFKGDLKEYRPHFMVGVPRLWESIYEGVQKQFRDGSKNQQKIVSFFLSVSQKYLDATRIAQGLTLDNLNPSSIEKIT------------------AQITALLLLPLHKLGDKLVYQKIRDGVGGCVKTWISGGGSLAKHIDNFFQIVGIPLIVGYGLTETSPVTNARRLHRNIVGASGQPITETEIKIIDLETKKTLPVGKIGLVCIKGTQVMQGYYKNPEATAKAIDSEGWFDSGDLGMVTP-QNDLVITGRAKDTIVLSNGENIEPQPLEDACV-RSPYIDQIMVVGQDQKYLGALIVPN-LD-ALQKWAQSQN----LNLTFPDA--------SATMDMIENSDLYAKE--VLSLYKQELAREVKNRAGYRPDDRIGAFKLILEPFSMDNGMMTQTLKIKRPVITSHYQDIINSMF 637          
BLAST of NO24G00370 vs. NCBI_GenBank
Match: XP_002291517.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED91624.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 391.3 bits (1004), Expect = 7.000e-105
Identity = 265/713 (37.17%), Postives = 376/713 (52.73%), Query Frame = 0
Query:  157 VKFVPAIWDILAEQCGPYLMLTDPSHITRPSXXXXXXXXXXXXXXAQARILIHQAAAGLHALGFRKGDHLAIFSENSARWLLMEQGASFNGCPTAVRGATAPVEELQYIYDHAD*AEGAEGAAATKD-----DLAGVAAELGLDP-----------TTVV-------TVEELLSVGAKHH----------------PDYLPPDLTPSDLHTLVFTSGTTGRPKGVMLSHSNLLHQIRHIDL------GLNPSPGDIILSLLPCWHIFERSAELFALARGGSLVYSSVRAFKSDLQTYRPHYLIVVPRLLENVYKSIKEKLSAGPPARRKLVASLSFLSLLYTRVLKRALGLVVRRLPSSQQQKKSLRLRSFLTPLLRAASRPLAVLLTLLLYPFAQISDLVVFKKVRKALGGRQKLVVSGGSALAKYLEEFYDSAGIPV---------------------------------EVELQVRDVETDRVVGQEGKEGGKPGKAGVVFTRGPQVMQGYYKDEESTRKAIDNNGWFDTGDLGFINPGTGDLVLTGRAKDVIVLSNGENVEPQPIEDAVVERSSVIEQCMVVGQDQRYLSALVVVNPLELAARGWMPQTEAERLIE----LVGPSAVLLGCAADSATLDKEANKLNANPGLVRKVEKEVAAALLQDPEEFRPWERVKHVSLLLAPFNVQSGMLTQTLKVKRQSVQEKYR 788
            V   PAIW  LA  C     L D  H+                   Q    + ++AA    LG +KG ++A+  ENSA WL+++ G    G  +AVRGA AP++EL+YIY+H+D    + G A  +D      LA  A   GLD             T+V       T +E+ ++G  +                  D   P +  SDL T+V+TSGTTGRPKGVML+H NLLHQ  H            P PG+++LSLLP WHI ER+ ELF L RG  +VYS +R FK+DL  Y+P ++++VPR+LE V   +++K ++G  A + LV   +  S L  +  K   GLVV   P               TP+       ++ ++   L P   + + +V+KKV+   GGRQ++++SGGSALA  LE FY++ GI +                                 + EL+V D E +   G+  ++    G AGVV  RGPQVM+GYYK+ E+T KA+D  GWFDTGDLG INP TGDL+LTGRAKD IVLSNGEN+EPQPIEDA++  S ++EQ M+ GQD R L A+ V++P EL   G + ++ A+++++    +  P      CA     L K + ++ A   + ++V  EV  A       FR WE+V  V + L PF + +G+LTQ+ KVKR  V ++Y+
Sbjct:  112 VSSCPAIWKELAINCPDNRALVD-DHL---------CDEKMDLTFKQMEDKVRRSAAAFKNLGVKKGVNVAVLGENSAMWLIVDHGIQLAGGASAVRGADAPLDELRYIYEHSD----SAGIAVLQDVNLLQKLAKDAKAKGLDSLGLRNDSSGAVKTIVLMHKGKKTDDEIKALGDANGVEVRVLSELLDSTTPLRDKELPAIDRSDLSTIVYTSGTTGRPKGVMLTHGNLLHQTGHRMAPTRPYDETEPLPGELMLSLLPVWHITERTFELFMLVRGCHVVYSGIRWFKNDLAKYQPQWMVLVPRVLEKVAFGVQDKFASGGAAVKALVKLFTATSTLKNKHQKIRKGLVVGDEPP--------------TPM----DGIISTIIVKALAPLNFLGNKLVWKKVQDGFGGRQRVIISGGSALAGSLETFYENCGIDILVGYGLTECSPLLSYRRTDSNLVTAGCVGFAATDTELRVVDPEANPENGE--RKALPDGLAGVVLGRGPQVMKGYYKNPEATGKAVDKWGWFDTGDLGRINPATGDLILTGRAKDTIVLSNGENIEPQPIEDAIMSESDLVEQVMLSGQDGRSLIAITVLSPNELVNAGLLEESRAKQILKDHDIVNDPKCSEEECAEACERLAKASAEIRAKGAVTKQVASEVKRA--TSSGSFRKWEQVSDVYVTLEPFAMANGLLTQSYKVKRDFVAKRYQ 788          
BLAST of NO24G00370 vs. NCBI_GenBank
Match: AGZ03883.1 (long-chain acyl-CoA synthetase 2 [Phaeodactylum tricornutum])

HSP 1 Score: 389.8 bits (1000), Expect = 2.000e-104
Identity = 263/709 (37.09%), Postives = 375/709 (52.89%), Query Frame = 0
Query:  161 PAIWDILAEQCGPYLMLTDPSHITRPSXXXXXXXXXXXXXXAQARILIHQAAAGLHALGFRKGDHLAIFSENSARWLLMEQGASFNGCPTAVRGATAPVEELQYIYDHAD*A------------EGAEGAAATKDDLAGVAAELGLDPTTVV-------TVEELLSVGAKHH----------------PDYLPPDLTPSDLHTLVFTSGTTGRPKGVMLSHSNLLHQIRHIDLGL-------NPSPGDIILSLLPCWHIFERSAELFALARGGSLVYSSVRAFKSDLQTYRPHYLIVVPRLLENVYKSIKEKLSAGPPARRKLVASLSFLSLLYTRVLKRALGLVVRRLPSSQQQKKSLRLRSFLTPLLRAASRPLAVLLTLLLYPFAQISDLVVFKKVRKALGGRQKLVVSGGSALAKYLEEFYDSAGIPVEVELQVRD------------------------VETD-RVVGQEGKEGGKP------GKAGVVFTRGPQVMQGYYKDEESTRKAIDNNGWFDTGDLGFINPGTGDLVLTGRAKDVIVLSNGENVEPQPIEDAVVERSSVIEQCMVVGQDQRYLSALVVVNPLELAARGWMPQTEA----ERLIELVGPSAVLLGCAADSATLDKEANKLNANPGLVRKVEKEVAAALLQDPEEFRPWERVKHVSLLLAPFNVQSGMLTQTLKVKRQSVQEKYRAAIEK 793
            P +W  L+  CG    L D  H+                  A+   ++ ++AA   +LG + G ++AI  ENSARWL+++ G    G  +AVRGA AP++EL+YIY+ +D A            + A  A+A      G++ E      TV+       T EEL  +  K+                  D   P L   DL T+V+TSGTTGRPKGVML+H NL+HQI H  +G         P P + +LSLLP WHI ERS EL+ LARG ++VYSS+R FK+DL  +RP + ++VPR+LE +   +++K S+G    + L    +  S    +  K   G VV   P    +K               ASR L V L+    P   + + +V+ KV+   GGR + ++SGGSAL+  LEEFY++AG+ + V   + +                        ++T+ RVV  E K    P      G+ GVV  RGPQ+M+GYYKD   T+KAID  G+FDTGDLG +NP TGDL+LTGRAKD IVLSNGENVEP P+EDA++   S+IEQ M+ GQD R L+A+VV++P ELA  G++ + E     +R  ++  P      C  + A L++ +  L  N  L+ ++  +   A     + F+ WE+VK V + L PF + +G LTQ+ KVKR  V E+Y   + K
Sbjct:    9 PQLWTELSRNCGDKRALLD-EHM---------CDDKVDVTFAEMNTIVRKSAAVFQSLGVKPGVNVAILGENSARWLMVDHGIQMAGGASAVRGADAPLDELRYIYEQSDSAGIVVVQGPKLLEKLASDASAKGMHRLGLSNEAYGKVHTVILMHREKKTSEELTKMVDKYGLTVRVFADLLEEVQPVTDEQIPVLGRDDLATIVYTSGTTGRPKGVMLTHGNLIHQIGH-RVGTETRYDESEPLPDETMLSLLPVWHITERSFELWMLARGCNVVYSSIRTFKNDLAKHRPEWAVLVPRVLEKIATGVQDKFSSGSLPVKLLSKLFTSTSKAAAKHRKITQGYVVGEQPPGAMEK--------------LASRALLVALS----PLNAVGNKIVWSKVQNGFGGRMRTIMSGGSALSGSLEEFYEAAGLTIIVAYGLTECAPLISHRRRDANLVTGGCVGTACIDTELRVVSPESKASTTPRPALPAGEVGVVIARGPQIMKGYYKDVAETKKAIDQFGFFDTGDLGRVNPATGDLILTGRAKDTIVLSNGENVEPGPLEDAILGELSLIEQVMLTGQDGRKLTAIVVLSPSELANEGFLSKDEGALMQKRNEQVNDPKCSAKDCQDNVAALNQGSKILRTNKDLIARLVGDCKKA----TKRFQKWEQVKDVCVTLEPFAMANGQLTQSYKVKRPFVLERYEDELSK 684          
BLAST of NO24G00370 vs. NCBI_GenBank
Match: AFZ52821.1 (Long-chain-fatty-acid--CoA ligase [Cyanobacterium aponinum PCC 10605])

HSP 1 Score: 388.3 bits (996), Expect = 5.900e-104
Identity = 249/669 (37.22%), Postives = 369/669 (55.16%), Query Frame = 0
Query:  163 IWDILAEQCGPYLMLTDPSHITRPSXXXXXXXXXXXXXXAQARILIHQAAAGLHALGFRKGDHLAIFSENSARWLLMEQGASFNGCPTAVRGATAPVEELQYIYDHAD*AEGAEGAAATKDDLAGVAAELGLD--------------PTTVVTVEELLSVGAKHHPDYLPPDLTPSDLHTLVFTSGTTGRPKGVMLSHSNLLHQIRHIDLGLNPSPGDIILSLLPCWHIFERSAELFALARGGSLVYSSVRAFKSDLQTYRPHYLIVVPRLLENVYKSIKEKLSAGPPARRKLVASLSFLSLLYTRVLKRALGLVVRRLPSSQQQKKSLRLRSFLTPLLRAASRPLAVLLTLLLYPFAQISDLVVFKKVRKALGGRQKLVVSGGSALAKYLEEFYDSAGIPVEVELQVRDV----------------------ETD-RVVGQEGKEGGKPGKAGVVFTRGPQVMQGYYKDEESTRKAIDNNGWFDTGDLGFINPGTGDLVLTGRAKDVIVLSNGENVEPQPIEDAVVERSSVIEQCMVVGQDQRYLSALVVVNPLELAARGWMPQTEAERLIELVGPSAVLLGCAADSATLDKEANKLNANPGLVRKVEKEVAAALLQDPEEFRPWERVKHVSLLLAPFNVQSGMLTQTLKVKRQSVQEKYRAAIEKLY 795
            +WD+L   CG  + L+DP   + P                     I Q A+ L +L  + G+ +A+F++NS RWL+ +QG   NGC  AVR   A  EEL YI +H+D +       A+ + L     +  L               P T     + L +GA+    ++P  +    L TL++TSGTTG+PKGVMLSH NLLHQ+ H+D+ L P  GD ILS+LP WH +ER+AE F L+RG +L+Y+++R FK DL+  +PH++I VPRL E++Y+ ++++   G   ++KLV      S  Y +  +   GL +  L  S  QK + ++ S                   LL P  ++ D +++ KVR+ +GG  +  VSGG +LAK+++ F+   GIP+ V   + +                       ET+ ++V  E +E    G+ G+VF RG QVMQGYYK+ E+T KAID  GWFD+GDLG++ P   DLV+TGRAKD IVLSNGEN+EPQP+EDA V RS  I+Q MVVGQDQ+YL AL+V N LE A + W    E  R++ L  PS       A+ A ++K       + G++   ++E+A  +   P  +R  +R+    L+L PF++ +GM+TQTLK+KR  +   Y+  I  ++
Sbjct:   20 MWDLLPSYCGDIIALSDPH--SEPE---------VRLTYEDVAKTIKQFASALQSLDIKSGEKIALFADNSPRWLIADQGIIINGCADAVRSPLADREELLYILEHSDSSVLVIQDVASLEKLRPELDDFSLKFVVLLSDEEVNRDYPHTTYNFSQFLQLGAQRPFIFVP--VEKDTLATLIYTSGTTGKPKGVMLSHRNLLHQVCHLDVILQPKKGDRILSILPSWHSYERAAEYFLLSRGTTLIYTNIRYFKQDLKKIKPHHMIGVPRLWESIYEGVQKQFRDGSKTQQKLVNFFLATSEKYIKAKRIKNGLDLEHLNPSSGQKLTAKITS------------------TLLLPVHKLGDKLIYTKVREGVGGCIQTWVSGGGSLAKHIDNFFQIVGIPLIVGYGLTETSPVTNARRISRNIVGASGQPIPETEIKIVNPETRETLPQGEKGLVFIRGTQVMQGYYKNPEATTKAIDEEGWFDSGDLGWVTP-DNDLVITGRAKDTIVLSNGENIEPQPLEDACV-RSPYIDQIMVVGQDQKYLGALIVPN-LE-ALQKW--GEEQNRILNL--PSV-----GANRAEIEKSD---LYSSGVLSLYKQELAREVKNRP-GYRIDDRISVFELILEPFSIDNGMMTQTLKIKRPVITNHYQDMINSMF 640          
BLAST of NO24G00370 vs. NCBI_GenBank
Match: ELS02197.1 (AMP-forming long-chain acyl-CoA synthetase [Xenococcus sp. PCC 7305])

HSP 1 Score: 388.3 bits (996), Expect = 5.900e-104
Identity = 254/675 (37.63%), Postives = 370/675 (54.81%), Query Frame = 0
Query:  157 VKFVPAIWDILAEQCGPYLMLTDPSHITRPSXXXXXXXXXXXXXXAQARILIHQAAAGLHALGFRKGDHLAIFSENSARWLLMEQGASFNGCPTAVRGATAPVEELQYIYDHAD*AEGAEGAAATKDDLAGVAAELGL--------------DPTTVVTVEELLSVGAKHHPDYLPPDLTPSDLHTLVFTSGTTGRPKGVMLSHSNLLHQIRHIDLGLNPSPGDIILSLLPCWHIFERSAELFALARGGSLVYSSVRAFKSDLQTYRPHYLIVVPRLLENVYKSIKEKLSAGPPARRKLVASLSFLSLLYTRVLKRALGLVVRRLPSSQQQKKSLRLRSFLTPLLRAASRPLAVLLTLLLYPFAQISDLVVFKKVRKALGGRQKLVVSGGSALAKYLEEFYDSAGIPVEVELQVRD----------------------VETD-RVVGQEGKEGGKPGKAGVVFTRGPQVMQGYYKDEESTRKAIDNNGWFDTGDLGFINPGTGDLVLTGRAKDVIVLSNGENVEPQPIEDAVVERSSVIEQCMVVGQDQRYLSALVVVNPLELAARGWMPQTEAERLIELVGPSAVLLGCAADSATLDKEANKLNANPGLVRKVEKEVAAALLQDPEEFRPWERVKHVSLLLAPFNVQSGMLTQTLKVKRQSVQEKYRAAIEKLY 795
            V  +P IW I A+  G  + L  P   ++ +                    I   AAGL ALG   GD +A+F++NS RWL+ +QG    G    VR  +A  +EL YIY+++D +        T + L+     L L                T ++   +LL +G+ H    +  D   S L TL++TSGTTG+PKGVMLSH NLLHQ+ ++   +    GD +LS+LP WH +ERSAE + L++G +  Y+++R+ KSDL+TY+PHY+I VPRL E++Y+ ++++     P ++KL+     LS  Y    + + GL +  L  S                  A ++  A L T  L P   + D +V++KVR A+GG+ K  VSGG +LAK+L++FY+   IPV V   + +                       ET+ ++V  E KE    G  G+V  RG QVMQGYYK+ E+T KAID  GWFD+GDLG++ P   DLVLTGRAKD IVL+NGEN+EPQPIEDA + RSS I+Q M+VGQDQR L AL+V N LE   + W+ Q      ++L  PS+      AD AT+   A  L + P  +R + ++     +QD   +R  +R+     +L PF+ ++G +TQT K+KR  V+EKY+  I+++Y
Sbjct:   12 VNSLPEIWPIAAQAFGGIMALNAPHLKSKVTLSYQELYQK-----------IQCCAAGLQALGVSSGDKIALFADNSPRWLIADQGIMMAGGVDVVRSGSAEQQELLYIYENSDSSSLIVENLKTLNRLSPQIEALSLKFIILLSDEEIPTSSSTKILNFSQLLELGSNHSLAKVTQD--KSTLATLIYTSGTTGKPKGVMLSHGNLLHQVNNLRQIILCEQGDRVLSILPSWHAYERSAEYYLLSQGCTQYYTNLRSLKSDLKTYQPHYMIGVPRLWESLYEGVQKQFREQAPTKQKLINWFFNLSQKYVMARRLSRGLDLDNLQPS------------------AIAKLFATLQTFALLPLHLLGDKIVYQKVRDAVGGKVKTFVSGGGSLAKHLDDFYELVNIPVLVGYGLTETAPVTNARTLDRNFSKTSGQPIAETEIKIVNPETKEALPTGAKGLVLIRGSQVMQGYYKNPEATAKAIDAEGWFDSGDLGWVTP-DNDLVLTGRAKDTIVLTNGENIEPQPIEDACI-RSSYIDQIMLVGQDQRALGALIVPN-LE-TVQQWITQQN----LQLQLPSS-----EADLATVANSA--LYSKP--IRDLFRKELTRQVQDRPGYRTDDRITDFQFILEPFSQENGTMTQTFKIKRPQVREKYQELIDQIY 638          
BLAST of NO24G00370 vs. NCBI_GenBank
Match: WP_041922643.1 (long-chain fatty acid--CoA ligase [Cyanobacterium aponinum])

HSP 1 Score: 388.3 bits (996), Expect = 5.900e-104
Identity = 249/669 (37.22%), Postives = 369/669 (55.16%), Query Frame = 0
Query:  163 IWDILAEQCGPYLMLTDPSHITRPSXXXXXXXXXXXXXXAQARILIHQAAAGLHALGFRKGDHLAIFSENSARWLLMEQGASFNGCPTAVRGATAPVEELQYIYDHAD*AEGAEGAAATKDDLAGVAAELGLD--------------PTTVVTVEELLSVGAKHHPDYLPPDLTPSDLHTLVFTSGTTGRPKGVMLSHSNLLHQIRHIDLGLNPSPGDIILSLLPCWHIFERSAELFALARGGSLVYSSVRAFKSDLQTYRPHYLIVVPRLLENVYKSIKEKLSAGPPARRKLVASLSFLSLLYTRVLKRALGLVVRRLPSSQQQKKSLRLRSFLTPLLRAASRPLAVLLTLLLYPFAQISDLVVFKKVRKALGGRQKLVVSGGSALAKYLEEFYDSAGIPVEVELQVRDV----------------------ETD-RVVGQEGKEGGKPGKAGVVFTRGPQVMQGYYKDEESTRKAIDNNGWFDTGDLGFINPGTGDLVLTGRAKDVIVLSNGENVEPQPIEDAVVERSSVIEQCMVVGQDQRYLSALVVVNPLELAARGWMPQTEAERLIELVGPSAVLLGCAADSATLDKEANKLNANPGLVRKVEKEVAAALLQDPEEFRPWERVKHVSLLLAPFNVQSGMLTQTLKVKRQSVQEKYRAAIEKLY 795
            +WD+L   CG  + L+DP   + P                     I Q A+ L +L  + G+ +A+F++NS RWL+ +QG   NGC  AVR   A  EEL YI +H+D +       A+ + L     +  L               P T     + L +GA+    ++P  +    L TL++TSGTTG+PKGVMLSH NLLHQ+ H+D+ L P  GD ILS+LP WH +ER+AE F L+RG +L+Y+++R FK DL+  +PH++I VPRL E++Y+ ++++   G   ++KLV      S  Y +  +   GL +  L  S  QK + ++ S                   LL P  ++ D +++ KVR+ +GG  +  VSGG +LAK+++ F+   GIP+ V   + +                       ET+ ++V  E +E    G+ G+VF RG QVMQGYYK+ E+T KAID  GWFD+GDLG++ P   DLV+TGRAKD IVLSNGEN+EPQP+EDA V RS  I+Q MVVGQDQ+YL AL+V N LE A + W    E  R++ L  PS       A+ A ++K       + G++   ++E+A  +   P  +R  +R+    L+L PF++ +GM+TQTLK+KR  +   Y+  I  ++
Sbjct:   18 MWDLLPSYCGDIIALSDPH--SEPE---------VRLTYEDVAKTIKQFASALQSLDIKSGEKIALFADNSPRWLIADQGIIINGCADAVRSPLADREELLYILEHSDSSVLVIQDVASLEKLRPELDDFSLKFVVLLSDEEVNRDYPHTTYNFSQFLQLGAQRPFIFVP--VEKDTLATLIYTSGTTGKPKGVMLSHRNLLHQVCHLDVILQPKKGDRILSILPSWHSYERAAEYFLLSRGTTLIYTNIRYFKQDLKKIKPHHMIGVPRLWESIYEGVQKQFRDGSKTQQKLVNFFLATSEKYIKAKRIKNGLDLEHLNPSSGQKLTAKITS------------------TLLLPVHKLGDKLIYTKVREGVGGCIQTWVSGGGSLAKHIDNFFQIVGIPLIVGYGLTETSPVTNARRISRNIVGASGQPIPETEIKIVNPETRETLPQGEKGLVFIRGTQVMQGYYKNPEATTKAIDEEGWFDSGDLGWVTP-DNDLVITGRAKDTIVLSNGENIEPQPLEDACV-RSPYIDQIMVVGQDQKYLGALIVPN-LE-ALQKW--GEEQNRILNL--PSV-----GANRAEIEKSD---LYSSGVLSLYKQELAREVKNRP-GYRIDDRISVFELILEPFSIDNGMMTQTLKIKRPVITNHYQDMINSMF 638          
BLAST of NO24G00370 vs. NCBI_GenBank
Match: WP_071591367.1 (long-chain fatty acid--CoA ligase [Xenococcus sp. PCC 7305])

HSP 1 Score: 388.3 bits (996), Expect = 5.900e-104
Identity = 254/675 (37.63%), Postives = 370/675 (54.81%), Query Frame = 0
Query:  157 VKFVPAIWDILAEQCGPYLMLTDPSHITRPSXXXXXXXXXXXXXXAQARILIHQAAAGLHALGFRKGDHLAIFSENSARWLLMEQGASFNGCPTAVRGATAPVEELQYIYDHAD*AEGAEGAAATKDDLAGVAAELGL--------------DPTTVVTVEELLSVGAKHHPDYLPPDLTPSDLHTLVFTSGTTGRPKGVMLSHSNLLHQIRHIDLGLNPSPGDIILSLLPCWHIFERSAELFALARGGSLVYSSVRAFKSDLQTYRPHYLIVVPRLLENVYKSIKEKLSAGPPARRKLVASLSFLSLLYTRVLKRALGLVVRRLPSSQQQKKSLRLRSFLTPLLRAASRPLAVLLTLLLYPFAQISDLVVFKKVRKALGGRQKLVVSGGSALAKYLEEFYDSAGIPVEVELQVRD----------------------VETD-RVVGQEGKEGGKPGKAGVVFTRGPQVMQGYYKDEESTRKAIDNNGWFDTGDLGFINPGTGDLVLTGRAKDVIVLSNGENVEPQPIEDAVVERSSVIEQCMVVGQDQRYLSALVVVNPLELAARGWMPQTEAERLIELVGPSAVLLGCAADSATLDKEANKLNANPGLVRKVEKEVAAALLQDPEEFRPWERVKHVSLLLAPFNVQSGMLTQTLKVKRQSVQEKYRAAIEKLY 795
            V  +P IW I A+  G  + L  P   ++ +                    I   AAGL ALG   GD +A+F++NS RWL+ +QG    G    VR  +A  +EL YIY+++D +        T + L+     L L                T ++   +LL +G+ H    +  D   S L TL++TSGTTG+PKGVMLSH NLLHQ+ ++   +    GD +LS+LP WH +ERSAE + L++G +  Y+++R+ KSDL+TY+PHY+I VPRL E++Y+ ++++     P ++KL+     LS  Y    + + GL +  L  S                  A ++  A L T  L P   + D +V++KVR A+GG+ K  VSGG +LAK+L++FY+   IPV V   + +                       ET+ ++V  E KE    G  G+V  RG QVMQGYYK+ E+T KAID  GWFD+GDLG++ P   DLVLTGRAKD IVL+NGEN+EPQPIEDA + RSS I+Q M+VGQDQR L AL+V N LE   + W+ Q      ++L  PS+      AD AT+   A  L + P  +R + ++     +QD   +R  +R+     +L PF+ ++G +TQT K+KR  V+EKY+  I+++Y
Sbjct:   10 VNSLPEIWPIAAQAFGGIMALNAPHLKSKVTLSYQELYQK-----------IQCCAAGLQALGVSSGDKIALFADNSPRWLIADQGIMMAGGVDVVRSGSAEQQELLYIYENSDSSSLIVENLKTLNRLSPQIEALSLKFIILLSDEEIPTSSSTKILNFSQLLELGSNHSLAKVTQD--KSTLATLIYTSGTTGKPKGVMLSHGNLLHQVNNLRQIILCEQGDRVLSILPSWHAYERSAEYYLLSQGCTQYYTNLRSLKSDLKTYQPHYMIGVPRLWESLYEGVQKQFREQAPTKQKLINWFFNLSQKYVMARRLSRGLDLDNLQPS------------------AIAKLFATLQTFALLPLHLLGDKIVYQKVRDAVGGKVKTFVSGGGSLAKHLDDFYELVNIPVLVGYGLTETAPVTNARTLDRNFSKTSGQPIAETEIKIVNPETKEALPTGAKGLVLIRGSQVMQGYYKNPEATAKAIDAEGWFDSGDLGWVTP-DNDLVLTGRAKDTIVLTNGENIEPQPIEDACI-RSSYIDQIMLVGQDQRALGALIVPN-LE-TVQQWITQQN----LQLQLPSS-----EADLATVANSA--LYSKP--IRDLFRKELTRQVQDRPGYRTDDRITDFQFILEPFSQENGTMTQTFKIKRPQVREKYQELIDQIY 636          
BLAST of NO24G00370 vs. NCBI_GenBank
Match: WP_099436008.1 (long-chain fatty acid--CoA ligase [Cyanobacterium aponinum] >PHV62260.1 long-chain fatty acid--CoA ligase [Cyanobacterium aponinum IPPAS B-1201])

HSP 1 Score: 387.9 bits (995), Expect = 7.700e-104
Identity = 249/669 (37.22%), Postives = 369/669 (55.16%), Query Frame = 0
Query:  163 IWDILAEQCGPYLMLTDPSHITRPSXXXXXXXXXXXXXXAQARILIHQAAAGLHALGFRKGDHLAIFSENSARWLLMEQGASFNGCPTAVRGATAPVEELQYIYDHAD*AEGAEGAAATKDDLAGVAAELGLD--------------PTTVVTVEELLSVGAKHHPDYLPPDLTPSDLHTLVFTSGTTGRPKGVMLSHSNLLHQIRHIDLGLNPSPGDIILSLLPCWHIFERSAELFALARGGSLVYSSVRAFKSDLQTYRPHYLIVVPRLLENVYKSIKEKLSAGPPARRKLVASLSFLSLLYTRVLKRALGLVVRRLPSSQQQKKSLRLRSFLTPLLRAASRPLAVLLTLLLYPFAQISDLVVFKKVRKALGGRQKLVVSGGSALAKYLEEFYDSAGIPVEVELQVRDV----------------------ETD-RVVGQEGKEGGKPGKAGVVFTRGPQVMQGYYKDEESTRKAIDNNGWFDTGDLGFINPGTGDLVLTGRAKDVIVLSNGENVEPQPIEDAVVERSSVIEQCMVVGQDQRYLSALVVVNPLELAARGWMPQTEAERLIELVGPSAVLLGCAADSATLDKEANKLNANPGLVRKVEKEVAAALLQDPEEFRPWERVKHVSLLLAPFNVQSGMLTQTLKVKRQSVQEKYRAAIEKLY 795
            +WD+L   CG  + L DP   + P                     I Q A+ L +L  + G+ +A+F++NS RWL+ +QG   NGC  AVR   A  EEL YI +H+D +       A+ + L     +  L               P T+    + L +GA+    ++P  +    L TL++TSGTTG+PKGVMLSH NLLHQ+ H+D+ L P  GD ILS+LP WH +ER+AE F L+RG +L+Y+++R FK DL+  +PH++I VPRL E++Y+ ++++   G   ++KLV      S  Y +  +   GL +  L  S  QK + ++ S                   LL P  ++ D +++ KVR+ +GG  +  VSGG +LAK+++ F+   GIP+ V   + +                       ET+ ++V  E +E    G+ G+VF RG QVMQGYYK+ E+T KAID  GWFD+GDLG++ P   DLV+TGRAKD IVLSNGEN+EPQP+EDA V RS  I+Q MVVGQDQ+YL AL+V N LE A + W    E  R++ L  PS       A+ A ++K       + G++   ++E+A  +   P  +R  +R+    L+L PF++ +GM+TQTLK+KR  +   Y+  I  ++
Sbjct:   20 MWDLLPSYCGDIIALFDPH--SEPE---------VRLTYEDVAKTIKQFASALQSLDIKSGEKIALFADNSPRWLIADQGIIINGCADAVRSPLADREELLYILEHSDSSVLVIQDVASLEKLRPELDDFSLKFVVLLSDEKVNRDYPHTIYNFSQFLQLGAQRPFIFVP--VEKDALATLIYTSGTTGKPKGVMLSHRNLLHQVCHLDVILQPKKGDRILSILPSWHSYERAAEYFLLSRGTTLIYTNIRYFKQDLKKIKPHHMIGVPRLWESIYEGVQKQFRDGSKTQQKLVNFFLATSEKYIKAKRIKNGLDLEHLNPSSGQKLTAKITS------------------TLLLPVHKLGDKLIYTKVREGVGGCIQTWVSGGGSLAKHIDNFFQIVGIPLIVGYGLTETSPVTNARRISRNIVGASGQPIPETEIKIVNPETRETLPQGEKGLVFIRGTQVMQGYYKNPEATAKAIDEEGWFDSGDLGWVTP-DNDLVITGRAKDTIVLSNGENIEPQPLEDACV-RSPYIDQIMVVGQDQKYLGALIVPN-LE-ALQKW--GEEQNRILNL--PSV-----GANRAEIEKSD---LYSSGVLSLYKQELAREVKNRP-GYRIDDRISVFELILEPFSIDNGMMTQTLKIKRPVITNHYQDMINSMF 640          
The following BLAST results are available for this feature:
BLAST of NO24G00370 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24306.16.700e-23353.99amp-dependent synthetase and ligase [Nannochlorops... [more]
CBJ32681.12.400e-11338.63long chain acyl-CoA synthetase [Ectocarpus silicul... [more]
WP_017292788.13.100e-10537.31long-chain fatty acid--CoA ligase [Geminocystis he... [more]
XP_002291517.17.000e-10537.17predicted protein [Thalassiosira pseudonana CCMP13... [more]
AGZ03883.12.000e-10437.09long-chain acyl-CoA synthetase 2 [Phaeodactylum tr... [more]
AFZ52821.15.900e-10437.22Long-chain-fatty-acid--CoA ligase [Cyanobacterium ... [more]
ELS02197.15.900e-10437.63AMP-forming long-chain acyl-CoA synthetase [Xenoco... [more]
WP_041922643.15.900e-10437.22long-chain fatty acid--CoA ligase [Cyanobacterium ... [more]
WP_071591367.15.900e-10437.63long-chain fatty acid--CoA ligase [Xenococcus sp. ... [more]
WP_099436008.17.700e-10437.22long-chain fatty acid--CoA ligase [Cyanobacterium ... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL039nonsL039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR030ncniR030Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR026ngnoR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002875NSK002875Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO24G00370.1NO24G00370.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|558369gene_7264Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100047g8gene6150Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO24G00370.1NO24G00370.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO24G00370 ID=NO24G00370|Name=NO24G00370|organism=Nannochloropsis oceanica|type=gene|length=2623bp
ATGAAGCTCGCACTCCACATCCTTCTCCTTGCCCTGGACTTCGAGAAGAT
CGCTAATGCATTCATTTTACCTCTCGGTGGGCATCTCCCGCAATTTAAGG
TTTCGGCTTCCCAGCGTCTCGTCCACCATCTTATCCGTGCACCCCCCCTC
CTCGTCGCCCCTCGCCCTGGCACCACGCCGCCAGACGGCATGCTTGAAAC
ATCAACCACCATCACCATCTCTACTTCAGCTAGTATAAACAGCAATGATA
GGAGGGATGCAGCTGGACATGAAACAGACCCATCCGCTCTCATCATCGAC
AACCCCGTTGCCCAACTCCGACGAGGGGATATCCCCACCTTCGCCTGGCC
ACACCCTCTCAGCGGCAGCGGCAGCAGCAGCAGTACCACCAGCACTAGCA
CTAGCAATGATACCCTTCCTCCTGTCGATGAAATGTCCCTAGCCCATGCC
ATTGCCTCTCCCGCCCTCGTCAAATTCGTTCCCGCCATCTGGGACATTCT
CGCCGAGCAATGTGGACCCTACCTCATGCTCACCGACCCCTCCCACATCA
CTCGCCCTTCTTCTTCCTCTTCTTCTTCCTCCTCCCCTTTAACTTTGACG
TTCGCCCAAGCCCGTATTTTGATCCACCAAGCAGCCGCAGGGCTCCACGC
CCTGGGCTTCCGGAAAGGAGATCACCTCGCCATCTTCTCCGAAAACAGTG
CCCGGTGGCTTTTAATGGAACAAGGAGCCTCGTTTAACGGCTGCCCAACG
GCCGTTAGAGGGGCAACAGCACCAGTGGAGGAGTTACAGTACATCTATGA
CCATGCGGATTgtaaggctgtggtcctacaggacatagcgttgcttcgaa
aacttcacactgtggggggctttcctcctctcttcacggcccacctaaat
tggtggtcattttgcgttctaatgataaagtagGAGCAGAAGGAGCAGAG
GGTGCCGCAGCAACAAAAGATGACCTCGCTGGGGTTGCCGCCGAGCTGGG
GCTCGACCCTACCACCGTCGTCACTGTCGAGGAGCTCCTTTCCGTCGGTG
CGAAGCACCACCCCGACTACCTCCCTCCCGACCTCACCCCCTCCGATTTA
CACACACTGGTCTTCACCAGTGGCACCACAGGGCGACCTAAAGGCGTGAT
GCTCTCCCACTCCAACCTCCTACACCAAATCCGACACATCGACCTGGGGT
TGAACCCCAGTCCCGGTGATATCATCCTCTCCCTCCTCCCCTGCTGGCAT
ATCTTCGAGAGGTCCGCCGAACTCTTCGCACTCGCACGTGGCGGGTCGCT
GGTGTACTCCTCCGTCCGTGCCTTCAAGAGTGACCTTCAAACTTACCGTC
CTCACTACCTAATAGTCGTCCCGAGGCTCCTGGAAAATGTGTATAAATCG
ATCAAAGAGAAGCTATCTGCCGGCCCACCGGCACGTCGGAAGCTAGTGGC
CTCTCTTTCATTCCTTTCCCTCCTTTACACCCGCGTCCTCAAACGAGCCC
TAGGTCTGGTCGTCCGTCGTCTCCCTTCTTCCCAACAGCAAAAGAAGAGT
CTCCGGCTCCGTTCCTTCCTCACCCCCCTCCTCCGTGCGGCCTCCCGTCC
CCTCGCCGTCCTTCTTACCCTCCTCCTTTACCCCTTTGCCCAGATCTCTG
ACCTGGTGGTGTTCAAAAAAGTTCGTAAGGCCTTAGGGGGCCGGCAGAAG
CTCGTTGTCTCTGGCGGTTCCGCCCTGGCTAAGTACCTGGAAGAGTTTTA
TGACTCTGCCGGTATTCCTGTGgtgagtggatacgggctgacggagacta
gtcccgtgattgccgtccgaagggctgggaggaggaggaacctagttgat
ggggggtggtggggctgcctccccagGAGGTGGAATTGCAAGTGAGGGAT
GTGGAGACGGACAGGGTGGTGGGGCAGGAAGGGAAGGAGGGAGGGAAGCC
GGGGAAGGCAGGGGTGGTGTTCACGCGCGGGCCGCAGGTGATGCAAGGTT
ACTATAAAGACGAAGAAAGTACACGGAAAGCCATTGATAACAATGGTTGG
TTCGATACAGGCGACTTGGGTTTCATCAATCCTGGCACGGGAGACCTAGT
TTTAACGGGACGGGCGAAAGACGTGATTGTGCTGAGTAATGGCGAGAACG
TGGAGCCCCAGCCCATAGAAGACGCAGTGGTAGAACGCTCGTCTGTGATT
GAGCAGTGCATGGTGGTTGGGCAGGACCAGCGATACTTGAGTGCTTTAGT
CGTCGTGAACCCCCTGGAGCTCGCGGCACGGGGCTGGATGCCGCAAACGG
AAGCCGAACGCCTGATTGAGCTCGTGGGCCCTTCAGCTGTCCTCTTGGGG
TGTGCCGCAGACAGTGCCACGCTTGACAAAGAAGCGAATAAACTGAATGC
AAACCCGGGCTTGGTCAGAAAGGTAGAGAAGGAGGTGGCGGCGGCGTTGC
TTCAAGACCCGGAGGAGTTTCGGCCGTGGGAGCGGGTTAAGCATGTATCT
TTGCTGCTAGCCCCCTTTAATGTGCAATCCGGTATGCTGACCCAGACGCT
GAAGGTGAAGAGGCAATCGGTACAGGAAAAGTATCGGGCGGCGATCGAGA
AGTTGTATGCGTTGAGGGAGTGA
back to top

protein sequence of NO24G00370.1

>NO24G00370.1-protein ID=NO24G00370.1-protein|Name=NO24G00370.1|organism=Nannochloropsis oceanica|type=polypeptide|length=799bp
MKLALHILLLALDFEKIANAFILPLGGHLPQFKVSASQRLVHHLIRAPPL
LVAPRPGTTPPDGMLETSTTITISTSASINSNDRRDAAGHETDPSALIID
NPVAQLRRGDIPTFAWPHPLSGSGSSSSTTSTSTSNDTLPPVDEMSLAHA
IASPALVKFVPAIWDILAEQCGPYLMLTDPSHITRPSSSSSSSSSPLTLT
FAQARILIHQAAAGLHALGFRKGDHLAIFSENSARWLLMEQGASFNGCPT
AVRGATAPVEELQYIYDHAD*AEGAEGAAATKDDLAGVAAELGLDPTTVV
TVEELLSVGAKHHPDYLPPDLTPSDLHTLVFTSGTTGRPKGVMLSHSNLL
HQIRHIDLGLNPSPGDIILSLLPCWHIFERSAELFALARGGSLVYSSVRA
FKSDLQTYRPHYLIVVPRLLENVYKSIKEKLSAGPPARRKLVASLSFLSL
LYTRVLKRALGLVVRRLPSSQQQKKSLRLRSFLTPLLRAASRPLAVLLTL
LLYPFAQISDLVVFKKVRKALGGRQKLVVSGGSALAKYLEEFYDSAGIPV
EVELQVRDVETDRVVGQEGKEGGKPGKAGVVFTRGPQVMQGYYKDEESTR
KAIDNNGWFDTGDLGFINPGTGDLVLTGRAKDVIVLSNGENVEPQPIEDA
VVERSSVIEQCMVVGQDQRYLSALVVVNPLELAARGWMPQTEAERLIELV
GPSAVLLGCAADSATLDKEANKLNANPGLVRKVEKEVAAALLQDPEEFRP
WERVKHVSLLLAPFNVQSGMLTQTLKVKRQSVQEKYRAAIEKLYALRE*
back to top
Synonyms
Publications