jgi.p|Nanoce1779_2|115976, gene_6888 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|115976
Unique Namegene_6888
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_17:353331..355812 -

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Properties
Property NameValue
TranscriptId116062
ProteinId115976
Product nameserine palmitoyltransferase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_17supercontigscaffold_17:353331..355812 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004758serine C-palmitoyltransferase activity
GO:0016769transferase activity, transferring nitrogenous groups
GO:0030170pyridoxal phosphate binding
GO:0016740transferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0017059serine C-palmitoyltransferase complex
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0008152metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL026ncniL026Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO13G01220NO13G01220Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|115976mRNA_6888-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|115976mRNA_6888Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|115976

>mRNA_6888-protein ID=mRNA_6888-protein|Name=jgi.p|Nanoce1779_2|115976|organism=Nannochloropsis oceanica|type=polypeptide|length=489bp
MSYERGHEIPITWFAAISTYFGYAVLILFGHIRDFFGRLFGVSRYLATQP
PPGYAPLLKDWENFYTRRLYHRIRDCWERPVCSAPGGRITVVERDSPDGN
KTMVLTERTRECMNLGSYNYLGFADDWQTSCKAEVMPTLDTLNSCLCSAR
MDLGTSKAHVELEELVARYVGKEAALVYNMGFGTNSTTIPALVGKGSLIL
SDTMNHSSIVAGSRASGAMVRTFVHNNAKSLERVLRDAIAGGMPRTRRPW
KKILVMVEGIYSMEGEICDLKGIVEVVKKFGAYLYVDEAHSIGALGETGR
GICEYAGVDPKDVDVMMGTFTKSFGGMGGYVAGDRKMIQYLRRASAGSMY
HNSLSPVVCKQVHQALRVIMGEDGTMTGRRKIEALRNNSNHMRRELVRMG
CHVYGDYDSPIIPVMLYNPTKIAAFSREAFARGLAVVVVGFPATPIVLSR
TRICVSAGHTREEIERALNVIEELVDLLRLRYAKRAMG*
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Synonyms
Publications