NO13G01220, NO13G01220 (gene) Nannochloropsis oceanica

Overview
NameNO13G01220
Unique NameNO13G01220
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2204
Alignment locationchr13:371217..373420 +

Link to JBrowse

Properties
Property NameValue
Descriptionlong chain base2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:371217..373420 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0030170pyridoxal phosphate binding
GO:0016740transferase activity
GO:0005488binding
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0009058biosynthetic process
Vocabulary: INTERPRO
TermDefinition
IPR015424PyrdxlP-dep_Trfase
IPR004839Aminotransferase_I/II
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO13G01220 vs. NCBI_GenBank
Match: EWM21787.1 (serine palmitoyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 935.3 bits (2416), Expect = 1.000e-268
Identity = 448/502 (89.24%), Postives = 477/502 (95.02%), Query Frame = 0
Query:  142 DRPFSTVEGLEDHPMSYERGHEIPITWFAAISTYFGYAVLILFGHIRDFFGRLFGVSRYLATQPPPGYAPLLKDWENFYTRRLYHRIRDCWERPVCSAPGGRITVVERDSPDGNKTMVLTERTRECMNLGSYNYLGFADDWQTSCKAEVMPTLDTLNSCLCSARMDLGTSKAHVELEELVARYVGKEAALVYNMGFGTNSTTIPALVGKGSLILSDTMNHSSIVAGSRASGAMVRTFVHNNAKSLERVLRDAIAGGMPRTRRPWKKILVMVEGIYSMEGEICDLKGIVEVVKKFGAYLYVDEAHSIGALGETGRGICEYAGVDPKDVDVMMGTFTKSFGGMGGYVAGDRKMIQYLRRASAGSMYHNSLSPVVCKQVHQALRVIMGEDGTMTGRRKIEALRNNSNHMRRELVRMGCHVYGDYDSPIIPVMLYNPTKIAAFSREAFARGLAVVVVGFPATPIVLSRTRICVSAGHTREEIERALNVIEELVDLLRLRYAKRAMG 644
            DRPFSTV GL D P SYERGHE+PITWFAAI+TYFGYAVLILFGHIRDFFGRLFG+SRYLAT PPPGYAPLLKDWENFYTRRLYHRIRDCWERPVCSAPGGRITVVERDSPDGNKTM++T+RTREC+NLGSYNYLGFADDWQTSCK+ VMPTLD  NSCLCSARMDLGTS+ HV LEELVARYVGKEAALVYNMGFGTNSTTIPALVG+GSLI+SDTMNHSSIVAGSRASGA+VRTFVHN+A SLERVLRDAIA GMPRT RPW+KILVMVEGIYSMEGEIC+LKGIVEVVK++G YLYVDEAHSIGALGETGRGICEYAGVDP DVD++MGTFTKSFGGMGGY+AGD+ +IQYLRRASAGS+YHNSLS +VC QV++ALRVIMGEDGT TGRRKI ALRNNSNHMRREL++MGCHVYGDYDSPIIPVMLYNPTKIAAFSREAF RGLAVVVVGFPATPIVLSRTRICVSAGHTR+EIERAL VIEELVDLLRLRYA   MG
Sbjct:  147 DRPFSTVAGLRDMPKSYERGHEVPITWFAAITTYFGYAVLILFGHIRDFFGRLFGMSRYLATSPPPGYAPLLKDWENFYTRRLYHRIRDCWERPVCSAPGGRITVVERDSPDGNKTMLMTKRTRECLNLGSYNYLGFADDWQTSCKSHVMPTLDNFNSCLCSARMDLGTSREHVRLEELVARYVGKEAALVYNMGFGTNSTTIPALVGRGSLIISDTMNHSSIVAGSRASGALVRTFVHNDAASLERVLRDAIARGMPRTHRPWRKILVMVEGIYSMEGEICNLKGIVEVVKRYGVYLYVDEAHSIGALGETGRGICEYAGVDPADVDILMGTFTKSFGGMGGYIAGDKALIQYLRRASAGSVYHNSLSTLVCSQVYRALRVIMGEDGTDTGRRKIAALRNNSNHMRRELIKMGCHVYGDYDSPIIPVMLYNPTKIAAFSREAFMRGLAVVVVGFPATPIVLSRTRICVSAGHTRKEIERALEVIEELVDLLRLRYANNVMG 648          
BLAST of NO13G01220 vs. NCBI_GenBank
Match: OEU07928.1 (PLP-dependent transferase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 624.4 bits (1609), Expect = 3.900e-175
Identity = 305/496 (61.49%), Postives = 371/496 (74.80%), Query Frame = 0
Query:  160 RGHEIPITWFAAISTYFGYAVLILFGHIRDFFGRLFGVSRYLA-TQPPP-------GYAPLLKDWENFYTRRLYHRIRDCWERPVCSAPGGRITVVERDSPDGNKTMVLT----ERTRECMNLGSYNYLGFADDWQTSCKAEVMPTLDTLNSCLCSARMDLGTSKAHVELEELVARYVGKEAALVYNMGFGTNSTTIPALVGKGSLILSDTMNHSSIVAGSRASGAMVRTFVHNNAKSLERVLRDAIAGGMPRTRRPWKKILVMVEGIYSMEGEICDLKGIVEVVKKFGAYLYVDEAHSIGALGETGRGICEYAGVDPKDVDVMMGTFTKSFGGMGGYVAGDRKMIQYLRRASAGSMYHNSLSPVVCKQVHQALRVIMGEDGTMTGRRKIEALRNNSNHMRRELVRMGCHVYGDYDSPIIPVMLYNPTKIAAFSREAFARGLAVVVVGFPATPIVLSRTRICVSAGHTREEIERALNVIEELVDLLRLRYAKRAMG 644
            + H I +  FAA +TYFGYAVLIL GHIRD F ++ G  RYL  TQ  P        YAPLL  WENFYTRRLYHRI+DC+ RP+ S PG +I V+ER S DGNKTM LT       R C+NLGSYNYLGFADDW+ +C  +V+ +L  L     S R + GT+K H E+E++VAR++ KE AL  NMGF TN TTIPAL  +G L++SD +NH+SIV G+RASGA +R F HN+ K LE +LR AI  G PRTRRPW KI+V+VEGIYSMEGE CDL  +V+V KKFGAY+Y+DEAHSIGA+G +GRG  EY GVD  D+D+MMGTFTKSFG MGGY+AG + +I +LRR  AGS YHNSLSP VC+QV  + +V+MGEDGT  G++KI+ALR+NSN+ R  L  MG HV G YDSPI+PVMLYNPTKIAAFSRE F RGLAVVVVGFPA PI+ SR R C+SAGHTR++++RAL  IE++ D+L+LRY     G
Sbjct:   95 KNHAIELPIFAAYTTYFGYAVLILCGHIRDLFAKIIGQGRYLRDTQNSPYPSDNLRWYAPLLSSWENFYTRRLYHRIQDCFNRPIASNPGAQIHVLERVSDDGNKTMTLTTGQGRVARACLNLGSYNYLGFADDWKVTCGKDVLNSLKDLPISTSSCRNEFGTTKLHREVEQVVARFLHKEDALALNMGFNTNCTTIPALTSRGDLLISDELNHTSIVNGARASGAAIRIFRHNDTKHLEDILRQAIIMGRPRTRRPWNKIMVIVEGIYSMEGEYCDLSNVVKVCKKFGAYIYLDEAHSIGAMGPSGRGCAEYCGVDTADIDIMMGTFTKSFGAMGGYIAGSKDVISFLRRRCAGSAYHNSLSPAVCQQVISSFKVVMGEDGTNIGKKKIQALRDNSNYFRMRLQDMGLHVLGHYDSPIMPVMLYNPTKIAAFSRECFKRGLAVVVVGFPAVPILESRARFCISAGHTRKQLDRALEEIEDVADILKLRYKSSTFG 590          
BLAST of NO13G01220 vs. NCBI_GenBank
Match: XP_002287833.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED95276.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 622.5 bits (1604), Expect = 1.500e-174
Identity = 301/481 (62.58%), Postives = 371/481 (77.13%), Query Frame = 0
Query:  166 ITWFAAISTYFGYAVLILFGHIRDFFGRLFGVSRYLATQPPPGYAPLLKDWENFYTRRLYHRIRDCWERPVCSAPGGRITVVERDSPDGNKTMVLTER---TRECMNLGSYNYLGFADDWQTSCKAEVMPTLDTLNSCLCSARMDLGTSKAHVELEELVARYVGKEAALVYNMGFGTNSTTIPALVGKGSLILSDTMNHSSIVAGSRASGAMVRTFVHNNAKSLERVLRDAIAGGMPRTRRPWKKILVMVEGIYSMEGEICDLKGIVEVVKKFGAYLYVDEAHSIGALGETGRGICEYAGVDPKDVDVMMGTFTKSFGGMGGYVAGDRKMIQYLRRASAGSMYHNSLSPVVCKQVHQALRVIMGEDGTMTGRRKIEALRNNSNHMRRELVRMGCHVYGDYDSPIIPVMLYNPTKIAAFSREAFARGLAVVVVGFPATPIVLSRTRICVSAGHTREEIERALNVIEELVDLLRLRYAKRAMG 644
            IT FAAI+TY GY VLI+ GHIRD    +     Y  +     YAPLLK WENFYTRRLYHRI+DC+ RP+ S P   I+V+ER S DGNKTM  T      R C+NLGSYNYLGFADDW  +C+  VM +LD L S + S+R++ GT+K H E+EE+VA + GKE A+V NMGF TN+T IP L  +G LI+SD +NH+SIV G+RASGA +RTF HN++  LE +LR+AI  G PRTRRPW +ILV+VEGIYSMEGE CDL+ +V V KK+GAY+Y+DEAHSIGA+G TGRG CEY GVDP +VDV+MGTFTKSFGGMGGY+A D++++  LR+  AGS YHNSLSPVVC+Q+  + +VIMGEDGT  G++K+ ALR+NSN+ R  L  MG HV G+YDSPI+PVMLYNPTKIAAFSRE   RGLAVVVVGFPA PI++SR R C+SAGHTREE++RAL  ++E+ DLL+LRYA+   G
Sbjct:  145 ITIFAAITTYLGYIVLIITGHIRDI--SVANTGNY-PSDDLTKYAPLLKSWENFYTRRLYHRIQDCFNRPIASRPSAIISVLERVSFDGNKTMSETSDGRVVRRCLNLGSYNYLGFADDWDITCRKGVMGSLDVLPSSVGSSRLEFGTTKLHREVEEIVATFTGKEDAVVLNMGFNTNATIIPTLTTRGDLIVSDELNHTSIVNGARASGAAIRTFRHNDSSDLEGILREAIVYGQPRTRRPWNRILVIVEGIYSMEGEYCDLRNVVSVCKKYGAYVYLDEAHSIGAMGPTGRGCCEYTGVDPSEVDVLMGTFTKSFGGMGGYIAADKRVVDMLRKECAGSAYHNSLSPVVCQQIISSFKVIMGEDGTNIGKQKLNALRDNSNYFRMRLTDMGLHVLGNYDSPIMPVMLYNPTKIAAFSRECLKRGLAVVVVGFPAVPILMSRARFCISAGHTREELDRALKELDEITDLLKLRYARSTFG 622          
BLAST of NO13G01220 vs. NCBI_GenBank
Match: CBN76133.1 (Serine palmitoyltransferase [Ectocarpus siliculosus])

HSP 1 Score: 618.2 bits (1593), Expect = 2.800e-173
Identity = 292/473 (61.73%), Postives = 371/473 (78.44%), Query Frame = 0
Query:  172 ISTYFGYAVLILFGHIRDFFGRLFGVSRYLAT-QPPPGYAPLLKDWENFYTRRLYHRIRDCWERPVCSAPGGRITVVERDSPDGNKTMVLTERTRECMNLGSYNYLGFADDWQTSCKAEVMPTLDTLNSCLCSARMDLGTSKAHVELEELVARYVGKEAALVYNMGFGTNSTTIPALVGKGSLILSDTMNHSSIVAGSRASGAMVRTFVHNNAKSLERVLRDAIAGGMPRTRRPWKKILVMVEGIYSMEGEICDLKGIVEVVKKFGAYLYVDEAHSIGALGETGRGICEYAGVDPKDVDVMMGTFTKSFGGMGGYVAGDRKMIQYLRRASAGSMYHNSLSPVVCKQVHQALRVIMGEDGTMTGRRKIEALRNNSNHMRRELVRMGCHVYGDYDSPIIPVMLYNPTKIAAFSREAFARGLAVVVVGFPATPIVLSRTRICVSAGHTREEIERALNVIEELVDLLRLRYAKRAMG 644
            ++TYF +  +I  GH+RDF G++F  SRYL   Q   GYAPL K +ENF+TRRLYHRI+ CW RPVCS+PG  I V+ER+S DG KT+  T+RT+  +NLGSYNYLGFADDW  +C++ VMP LDTL       R D GT+ +HVELE+LVAR++GKE  +V+NMG+GTN+TTIPAL   G+L++SD +NH SIV+G RA+GA +R F HN+A+ LE VLR+AI  GMPRTRRPWKK+LV+VEGIYSMEGE+ DL  IV+V KK  AY+Y+DEAHSIGALG+TGRG CEY GVD KDVDVMMGTFTKSFGGMGGY+AG +++I +LR   AG +YHN+LSPVV  QV  ALR+IMGEDGT  G  K+ ALR NSN +RR+L  MG HV GDY+SP+IP ++Y P K++AFS++ + RG+AVVVVGFPATP++  RTRIC+SAGH+RE++E A+  ++E+ +   LRY + AMG
Sbjct:    1 MTTYFTFIAVICMGHLRDFVGKVFRRSRYLDDFQAKEGYAPLFKSFENFFTRRLYHRIQHCWNRPVCSSPGAHIEVIERESKDGMKTLQRTDRTKRMLNLGSYNYLGFADDWGATCRSGVMPVLDTLPVACSINRKDFGTTSSHVELEQLVARFLGKEDCVVFNMGYGTNATTIPALCSAGTLVVSDCLNHMSIVSGCRAAGAHIRVFKHNDAEDLESVLREAIVMGMPRTRRPWKKVLVVVEGIYSMEGEVADLAPIVKVAKKHKAYVYLDEAHSIGALGKTGRGACEYCGVDTKDVDVMMGTFTKSFGGMGGYIAGSKELINHLRTRCAGIVYHNALSPVVAAQVVTALRIIMGEDGTDIGATKLRALRENSNFVRRKLEDMGMHVLGDYNSPVIPALIYVPAKLSAFSKDCYDRGMAVVVVGFPATPLLAGRTRICISAGHSREDLEYAVEKLDEVAEKCFLRYGRNAMG 473          
BLAST of NO13G01220 vs. NCBI_GenBank
Match: GAX10181.1 (serine palmitoyltransferase [Fistulifera solaris])

HSP 1 Score: 592.0 bits (1525), Expect = 2.200e-165
Identity = 294/514 (57.20%), Postives = 362/514 (70.43%), Query Frame = 0
Query:  163 EIPITWFAAISTYFGYAVLILFGHIRDFFGRLFGVSRYL------ATQPPPGYAPLLKDWENFYTRRLYHRIRDCWERPVCSAPGGRITVVERDSPDGNKTMVLT---------------------------ERTRECMNLGSYNYLGFADDWQTSCKAEVMPTLDTLNSCLCSARMDLGTSKAHVELEELVARYVGKEAALVYNMGFGTNSTTIPALVGKGSLILSDTMNHSSIVAGSRASGAMVRTFVHNNAKSLERVLRDAIAGGMPRTRRPWKKILVMVEGIYSMEGEICDLKGIVEVVKKFGAYLYVDEAHSIGALGETGRGICEYAGVDPKDVDVMMGTFTKSFGGMGGYVAGDRKMIQYLRRASAGSMYHNSLSPVVCKQVHQALRVIMGEDGTMTGRRKIEALRNNSNHMRRELVRMGCHVYGDYDSPIIPVMLYNPTKIAAFSREAFARGLAVVVVGFPATPIVLSRTRICVSAGHTREEIERALNVIEELVDLLRLRYAKRAMG 644
            E  I  F A + Y  YAVLI+ GHIRDF   +F   RY+       +     +APLLK WE+FYTRRLY R++DC+ RP+ S PG  I VVER S D  K+M +                               R C+NLGSYNYLGFADDWQ SC  EV  +LD L     S R + GTS  H ++E+ VAR++GKE ALV NMGF TN+TTIPALVG+G LI+SD +NH+SIV G+RASGA +R F HN+  +LE +LRDAI  G PRTRRPW KILV+VEGIYSMEGE CDL+ +V V KK+GAY+Y+DEAHSIGA+G TGRG  EY GVD  D+D+MMGTFTKSFGGMGGY+A  ++ I +LR+  AGS+YHNSLSPVVC+QV  + +VIMGEDGT  G++K++ALR+NSN+ R  L  MG  V G YDSPI+PVMLYNP KI+AFSRE   RG+AVVVVGFPA PI++SR R C+SAGHTRE+++RAL  I+E+ D+  LRYA+   G
Sbjct:   87 EPQIPLFIAYTVYMSYAVLIIIGHIRDFLALVFKNGRYIRKETGFPSDDRDSFAPLLKSWEHFYTRRLYTRVQDCFNRPIASNPGAHIDVVERCSYDQQKSMKVLGSLDNLDNDAQRQEYRQGEYFVESENGSAVRRCVNLGSYNYLGFADDWQVSCAKEVKASLDDLAVSTSSCRNEYGTSSIHRQVEKTVARFLGKEDALVLNMGFNTNATTIPALVGRGDLIISDELNHTSIVNGARASGAAIRIFRHNDTSNLEVILRDAIIKGRPRTRRPWNKILVVVEGIYSMEGEYCDLRNVVRVCKKYGAYVYLDEAHSIGAMGPTGRGCAEYTGVDTADIDIMMGTFTKSFGGMGGYIAASKETIAFLRQRCAGSVYHNSLSPVVCQQVLTSFKVIMGEDGTTIGKQKLQALRDNSNYCRMRLQEMGLQVLGHYDSPIMPVMLYNPCKISAFSRECLKRGVAVVVVGFPAVPILMSRARFCISAGHTREDLDRALKEIDEIADICNLRYARSMFG 600          
BLAST of NO13G01220 vs. NCBI_GenBank
Match: GAX16143.1 (serine palmitoyltransferase [Fistulifera solaris])

HSP 1 Score: 590.9 bits (1522), Expect = 4.800e-165
Identity = 293/514 (57.00%), Postives = 362/514 (70.43%), Query Frame = 0
Query:  163 EIPITWFAAISTYFGYAVLILFGHIRDFFGRLFGVSRYL------ATQPPPGYAPLLKDWENFYTRRLYHRIRDCWERPVCSAPGGRITVVERDSPDGNKTMVLT---------------------------ERTRECMNLGSYNYLGFADDWQTSCKAEVMPTLDTLNSCLCSARMDLGTSKAHVELEELVARYVGKEAALVYNMGFGTNSTTIPALVGKGSLILSDTMNHSSIVAGSRASGAMVRTFVHNNAKSLERVLRDAIAGGMPRTRRPWKKILVMVEGIYSMEGEICDLKGIVEVVKKFGAYLYVDEAHSIGALGETGRGICEYAGVDPKDVDVMMGTFTKSFGGMGGYVAGDRKMIQYLRRASAGSMYHNSLSPVVCKQVHQALRVIMGEDGTMTGRRKIEALRNNSNHMRRELVRMGCHVYGDYDSPIIPVMLYNPTKIAAFSREAFARGLAVVVVGFPATPIVLSRTRICVSAGHTREEIERALNVIEELVDLLRLRYAKRAMG 644
            E  I  F A + Y  YAVLI+ GHIRDF   +F   RY+       +     +APLLK WE+FYTRRLY R++DC+ RP+ S PG  I VVER S D  K+M +                               R C+NLGSYNYLGFADDWQ SC  EV  +LD L     S R + GTS  H ++E+ VAR++GKE ALV NMGF TN+TTIPALVG+G LI+SD +NH+SIV G+RASGA +R F HN+  +LE +LRDAI  G PRTRRPW KILV+VEGIYSMEGE CDL+ +V V KK+GAY+Y+DEAHSIGA+G TGRG  EY GVD  D+D++MGTFTKSFGGMGGY+A  ++ I +LR+  AGS+YHNSLSPVVC+QV  + +VIMGEDGT  G++K++ALR+NSN+ R  L  MG  V G YDSPI+PVMLYNP KI+AFSRE   RG+AVVVVGFPA PI++SR R C+SAGHTRE+++RAL  I+E+ D+  LRYA+   G
Sbjct:   87 EPQIPLFIAYTVYMSYAVLIIIGHIRDFLALVFKNGRYIRKETGFPSDERDSFAPLLKSWEHFYTRRLYTRVQDCFNRPIASNPGAHIDVVERCSYDQQKSMKVLGSLDNLENDAQRQEYRQGEYFVESENGSAVRRCVNLGSYNYLGFADDWQVSCAKEVKASLDNLAVSTSSCRNEYGTSSIHRQVEKTVARFLGKEDALVLNMGFNTNATTIPALVGRGDLIISDELNHTSIVNGARASGAAIRIFRHNDTSNLEVILRDAIIKGRPRTRRPWNKILVVVEGIYSMEGEYCDLRNVVRVCKKYGAYVYLDEAHSIGAMGPTGRGCAEYTGVDTADIDIVMGTFTKSFGGMGGYIAASKETIAFLRQRCAGSVYHNSLSPVVCQQVLTSFKVIMGEDGTTIGKQKLQALRDNSNYCRMRLQEMGLQVLGHYDSPIMPVMLYNPCKISAFSRECLKRGVAVVVVGFPAVPILMSRARFCISAGHTREDLDRALKEIDEIADICNLRYARSMFG 600          
BLAST of NO13G01220 vs. NCBI_GenBank
Match: XP_009033679.1 (hypothetical protein AURANDRAFT_20733 [Aureococcus anophagefferens] >EGB11295.1 hypothetical protein AURANDRAFT_20733 [Aureococcus anophagefferens])

HSP 1 Score: 582.8 bits (1501), Expect = 1.300e-162
Identity = 284/476 (59.66%), Postives = 358/476 (75.21%), Query Frame = 0
Query:  166 ITWFAAISTYFGYAVLILFGHIRDFFGRLFGVSRYLATQPPPG----YAPLLKDWENFYTRRLYHRIRDCWERPVCSAPGGRITVVERDSPDGNKTMVLTERTRECMNLGSYNYLGFADDWQTSCKAEVMPTLDTLNSCLCSARMDLGTSKAHVELEELVARYVGKEAALVYNMGFGTNSTTIPALVGKGSLILSDTMNHSSIVAGSRASGAMVRTFVHNNAKSLERVLRDAIAGGMPRTRRPWKKILVMVEGIYSMEGEICDLKGIVEVVKKFGAYLYVDEAHSIGALGETGRGICEYAGVDPKDVDVMMGTFTKSFGGMGGYVAGDRKMIQYLRRASAGSMYHNSLSPVVCKQVHQALRVIMGEDGTMTGRRKIEALRNNSNHMRRELVRMGCHVYGDYDSPIIPVMLYNPTKIAAFSREAFARGLAVVVVGFPATPIVLSRTRICVSAGHTREEIERALNVIEELVDLLRLRY 638
            +++F   +TYF Y +LI+ GH RDF+GR  G +R+    P        APL K WENFYTRRLY RI D + RP+CS+P   ITV  R +    K +  T +T+ C+NLGSYNYLGFADDW  +C   V+ T+D       S+R DLGT+  H  LEE VA +VGKE A+V+NMG+GTNSTT+PALVGKG L++SD +NH+SIV G RASGA++R+F HN+A++LE VLR+A++ G PRTRRPWKKILVMVEGIYSMEGEIC+LK I  V K++ AYLY+DEAHSIGALG  GRG CE+ GVDPKDVD++MGTFTKSFGGMGGYVA  + ++ +LR A  G + H+++SPV+C QV +A  +IMG DGT  G  KI+ L++NSN+ R+ELV  G HVYGDYDSPIIPV+LYNPTKIAAFSRE   R LAVVVVGFPAT +V SR R CVSAGHTR ++E A+  I+E+  L++++Y
Sbjct:    1 MSYFTEFTTYFAYMLLIVVGHFRDFWGRASGRTRWKTLLPSGAGRAKLAPLFKSWENFYTRRLYDRIIDVFNRPICSSPSAWITVQSRATDPATKELEKTGKTQRCLNLGSYNYLGFADDWMATCGPPVLRTVDXXXXSCGSSRSDLGTTALHRTLEERVAAFVGKEDAVVFNMGYGTNSTTVPALVGKGDLVVSDELNHASIVNGCRASGALIRSFKHNDAEALEAVLREAVSMGAPRTRRPWKKILVMVEGIYSMEGEICNLKAIAAVAKRYKAYLYLDEAHSIGALGANGRGACEHCGVDPKDVDILMGTFTKSFGGMGGYVAASKAVVDHLRVACPGILNHDAMSPVMCAQVLRATEIIMG-DGTDLGASKIQDLKDNSNYFRKELVNAGLHVYGDYDSPIIPVLLYNPTKIAAFSRECLKRDLAVVVVGFPATTLVKSRARFCVSAGHTRADLEDAVAKIKEVAALIKIQY 475          
BLAST of NO13G01220 vs. NCBI_GenBank
Match: CCI48496.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 580.1 bits (1494), Expect = 8.500e-162
Identity = 283/479 (59.08%), Postives = 358/479 (74.74%), Query Frame = 0
Query:  166 ITWFAAISTYFGYAVLILFGHIRDFFGRLFGVSRYLATQPPPGYAPLLKDWENFYTRRLYHRIRDCWERPVCSAPGGRITVVERDSPDGNKTMV-LTERTRECMNLGSYNYLGFADDWQTSCKAEVMPTLDTLNSCLCSARMDLGTSKAHVELEELVARYVGKEAALVYNMGFGTNSTTIPALVGKGSLILSDTMNHSSIVAGSRASGAMVRTFVHNNAKSLERVLRDAIAGGMPRTRRPWKKILVMVEGIYSMEGEICDLKGIVEVVKKFGAYLYVDEAHSIGALGETGRGICEYAGVDPKDVDVMMGTFTKSFGGMGGYVAGDRKMIQYLRRASAGSMYHNSLSPVVCKQVHQALRVIMGEDGTMTGRRKIEALRNNSNHMRRELVRMGCHVYGDYDSPIIPVMLYNPTKIAAFSREAFARGLAVVVVGFPATPIVLSRTRICVSAGHTREEIERALNVIEELVDLLRLRYAKRAMG 644
            + W AA+  Y   A+L+  GHIRDFFGRL G SRY +    PG+A LL  WENFYT R+YHR +D + RPV +APG  I V+ER S DGN+T+       ++C+NLGSYNYLGFADDW ++C  +V  T+        S+ M+ GT+  H ELEE  A+++GK AALVYNMGF TN+TTIPAL+ KGSLI+SD++NHSSIV G+RASGA V  F HN+AK LE  LR  IA G PRT R WKKI+VMVEGIYSMEGEI  L+ IV+VVKK+ AY+YVDEAHSIGALG TGRGICEYAGVDP ++D++MGTFTKSFGGMGGY+A   ++I Y+R ASAGS+Y  SLSPVV +QV  +L++IMG DG+  GR+K++ALR NSN+ R++L+ MG    G++DSP+IPVML+  +KI  FSR+   R LAVV VGFPATP++LSR R C+SA HT+E++++AL  IEE+     +RY K  MG
Sbjct:    4 VPWTAAMFCYIQIAILLTIGHIRDFFGRLSGSSRYKSAVTKPGFAKLLLAWENFYTNRIYHRGQDVFNRPVANAPGAYIDVIERYSNDGNRTLQNKAGCVKKCVNLGSYNYLGFADDWMSTCSKDVFQTVQRFGLASLSSAMEFGTTTIHRELEEEFAKFIGKPAALVYNMGFATNATTIPALMSKGSLIVSDSLNHSSIVNGARASGAHVVVFRHNDAKHLEHTLRMKIAQGQPRTHRAWKKIMVMVEGIYSMEGEIVHLRDIVDVVKKYKAYIYVDEAHSIGALGRTGRGICEYAGVDPNEIDILMGTFTKSFGGMGGYIAASEEIISYIRTASAGSVYAASLSPVVAQQVLTSLKIIMGTDGSDYGRKKLDALRENSNYFRQQLMNMGVVTLGNFDSPVIPVMLFCLSKIPEFSRQCLERNLAVVTVGFPATPLLLSRVRFCISAAHTKEDLDKALKQIEEVSSNCNIRYLKSCMG 482          
BLAST of NO13G01220 vs. NCBI_GenBank
Match: CEO95853.1 (hypothetical protein PBRA_004566 [Plasmodiophora brassicae])

HSP 1 Score: 579.3 bits (1492), Expect = 1.500e-161
Identity = 282/493 (57.20%), Postives = 358/493 (72.62%), Query Frame = 0
Query:  166 ITWFAAISTYFGYAVLILFGHIRDFFGRLFGVSRYLATQPPPGYAPLLKDWENFYTRRLYHRIRDCWERPVCSAPGGRITVVERDSPDGNKTMVLTERTRECMNLGSYNYLGFADDWQTSCKAEVMPTLDTLNSCLCSARMDLGTSKAHVELEELVARYVGKEAALVYNMGFGTNSTTIPALVGKGSLILSDTMNHSSIVAGSRASGAMVRTFVHNNAKSLERVLRDAIAGGMPRTRRPWKKILVMVEGIYSMEGEICDLKGIVEVVKKFGAYLYVDEAHSIGALGETGRGICEYAGVDPKDVDVMMGTFTKSFGGMGGYVAGDRKMIQYLRRASAGSMYHNSLSPVVCKQVHQALRVIMGEDGTMTGRRKIEALRNNSNHMRRELVRMGCHV---------------------YGDYDSPIIPVMLYNPTKIAAFSREAFARGLAVVVVGFPATPIVLSRTRICVSAGHTREEIERALNVIEELVDLLRLRY 638
            I W+ AISTY+GYAVLI FG++RD   RL G SR    Q PPGYAP++KD E+FYTRRLY R+RD + RP+C +PG  I V+ER S D N T  LT R R C+NLGSYNYLGF D   + C+  V+ TL   +   CS+R+D GT+  HVELE LVA+++GK AA+V  MGFGTNST IPALVGKG LI+SD+ NHSSI+ G+R SGA ++TF H +   LER +R +I  G PRT RPW KILV+VEGIYSMEGEICDL  IV+VVKK+  YL+VDEAHSIGALG TGRG+CE+ GVDP  VD++MGTFTKSFGG+GGY+AG +++I YLR + AGS+Y  S+SP VC+Q+  ++ +I G DGT  GR++++ALR+N+N  R  +  MGCHV                      GD DSP++PVML NP KI+AFSRE   R LAVVVVGFPATP++LSR R C+SA HTR ++E A+ V++E+ D+  ++Y
Sbjct:   27 IAWWPAISTYWGYAVLIAFGYVRDLVDRLVGQSR----QTPPGYAPIVKDHEDFYTRRLYMRLRDAFNRPICGSPGAYIDVLERVSHDQNITQQLTGRYRRCLNLGSYNYLGFGDA-DSPCRDAVLETLQRFSVSTCSSRLDSGTTSVHVELESLVAKFLGKPAAMVVGMGFGTNSTVIPALVGKGGLIVSDSCNHSSIIVGARLSGAKIKTFKHQDVDDLERTVRQSIIEGQPRTHRPWTKILVIVEGIYSMEGEICDLPRIVDVVKKYNCYLFVDEAHSIGALGRTGRGVCEHTGVDPASVDILMGTFTKSFGGVGGYIAGSQELIDYLRVSCAGSLYSPSISPTVCQQILSSMMIIGGMDGTDQGRKRLDALRDNANFFREAMKEMGCHVLGILFMLDSLLEQTMLISMTLLGDTDSPVVPVMLCNPAKISAFSRECLDRNLAVVVVGFPATPVLLSRVRFCISAAHTRADLEHAIAVLDEVCDVTHIKY 514          
BLAST of NO13G01220 vs. NCBI_GenBank
Match: PTQ48055.1 (hypothetical protein MARPO_0006s0093 [Marchantia polymorpha])

HSP 1 Score: 576.6 bits (1485), Expect = 9.400e-161
Identity = 282/474 (59.49%), Postives = 353/474 (74.47%), Query Frame = 0
Query:  164 IPITWFAAISTYFGYAVLILFGHIRDFFGRLFGVSRYLATQPPPGYAPLLKDWENFYTRRLYHRIRDCWERPVCSAPGGRITVVERDSPDGNKTMVLTERTRECMNLGSYNYLGFADDWQTSCKAEVMPTLDTLNSCLCSARMDLGTSKAHVELEELVARYVGKEAALVYNMGFGTNSTTIPALVGKGSLILSDTMNHSSIVAGSRASGAMVRTFVHNNAKSLERVLRDAIAGGMPRTRRPWKKILVMVEGIYSMEGEICDLKGIVEVVKKFGAYLYVDEAHSIGALGETGRGICEYAGVDPKDVDVMMGTFTKSFGGMGGYVAGDRKMIQYLRRASAGSMYHNSLSPVVCKQVHQALRVIMGEDGTMTGRRKIEALRNNSNHMRRELVRMGCHVYGDYDSPIIPVMLYNPTKIAAFSREAFARGLAVVVVGFPATPIVLSRTRICVSAGHTREEIERALNVIEELVDLLRLRY 638
            + I +FAA++TYF Y +L +FGH+RDFF R F  S       P GYAPL +D+E+FYTRRLYHRI+DC+ RP+ SAP   I V+ER S D NKT+  T  +R C+NLGSYNYLGFA      C   V+ +LD      C++R D GT+  H ELE L+A ++GK AALVY MGF TNSTT+PAL+GKG LI+SD++NHSSIVAG+R SGA V  F HN  + LE VLR AIA G PRT RPWKKI+V+VEGIYSMEGE+C L+ IV V KK+ AYLY+DEAHSIGA+G++G+G+CE  GVDP DVD+MMGTFTKSFG  GGY+AG +++IQYL+  S G +Y  ++SP   +QV  ALR+I GEDGT  G RK+  +R NSN  R EL +MGC V GD DSP++PVMLYNP KI AFSRE F R +AVV V FPATP++LSR RIC+SA HTRE+++R L VI E+ D+++L+Y
Sbjct:    3 VTIPYFAALTTYFSYGLLFVFGHLRDFF-RGFMKSE----SAPEGYAPLCRDFEDFYTRRLYHRIQDCFNRPIASAPNAWIDVIERYSNDNNKTLHRTGNSRHCLNLGSYNYLGFAAQ-DEYCTPRVVKSLDKFAISTCASRADGGTTSLHEELETLMADFIGKPAALVYGMGFATNSTTLPALMGKGGLIISDSLNHSSIVAGARGSGAKVSVFQHNIPEHLEEVLRQAIADGQPRTHRPWKKIMVIVEGIYSMEGELCRLREIVAVTKKYKAYLYLDEAHSIGAIGKSGKGVCELQGVDPADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKHVSPGHLYATAMSPPAVQQVISALRLIRGEDGTDRGARKLAQVRENSNFFREELRKMGCEVLGDADSPVMPVMLYNPAKIPAFSRECFKRNVAVVTVAFPATPLLLSRARICISAAHTREDLQRGLEVISEVSDMVKLKY 470          
The following BLAST results are available for this feature:
BLAST of NO13G01220 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21787.11.000e-26889.24serine palmitoyltransferase [Nannochloropsis gadit... [more]
OEU07928.13.900e-17561.49PLP-dependent transferase [Fragilariopsis cylindru... [more]
XP_002287833.11.500e-17462.58predicted protein [Thalassiosira pseudonana CCMP13... [more]
CBN76133.12.800e-17361.73Serine palmitoyltransferase [Ectocarpus siliculosu... [more]
GAX10181.12.200e-16557.20serine palmitoyltransferase [Fistulifera solaris][more]
GAX16143.14.800e-16557.00serine palmitoyltransferase [Fistulifera solaris][more]
XP_009033679.11.300e-16259.66hypothetical protein AURANDRAFT_20733 [Aureococcus... [more]
CCI48496.18.500e-16259.08unnamed protein product [Albugo candida][more]
CEO95853.11.500e-16157.20hypothetical protein PBRA_004566 [Plasmodiophora b... [more]
PTQ48055.19.400e-16159.49hypothetical protein MARPO_0006s0093 [Marchantia p... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR026ncniR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001774NSK001774Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G01220.1NO13G01220.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|115976gene_6888Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100065g6gene8643Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G01220.1NO13G01220.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G01220 ID=NO13G01220|Name=NO13G01220|organism=Nannochloropsis oceanica|type=gene|length=2204bp
ATGGGAGCTGGTTCGTTACCGTCACGGTATTTCCTTGAGTCGCTGACTGA
Ggtgccaatcagtcctgtttttctcttgccgcacgctctactcagtcacc
tttacctcaggcaggcttatgaattctacattcctcaccacaaaaacaca
cagAGACACGTGGTTCCCGTCGTGTGCCGATCGTCGCCGTTGGCAGACGA
AAAGAAGAGCAGCAGCATCATCATGgtaagtttgacaaatgccgatggga
gcaagcgaacgatagaggaaagcagggcggtctcgcatgcgtgtgtcggt
gtgtgtgcatgtctgtgtgtagattgtgatgctagagacacaaggcaggc
aggcaggtacacatcggactaaaaaacctataattttcactccagGTGCT
GACACGGGGCAAGAAGGCTAAGAGCGACGCGGGGGGGGCTGCCCCGTCTC
CTTCTACCACCTCAACCAACGGCCATAAGTTTCGCCGGGCCTCCTCCTCC
TCCTCTGATGCCACTGTGGCCCCTGTAAAGACCCCCAAGAGCAGCCGCAG
CCCATTTGCTGAAATTAAGCGCCTAACGTCCTTCCGCAGAAGCAAGGCCT
CTGAAGCAGAGCCTGCAGTGGAGACGGCCTCGACTTCCTCTTCATCCTCC
TCTTCCTCTCCCTCTGTATCTCCCCTTAGCCCCCTCGCCGTGCTCGACCG
CCCCTTTTCAACCGTCGAGGGTTTAGAGGACCATCCCATGTCTTATGAAC
GAGGGCACGAAATTCCCATCACGTGGTTTGCTGCCATATCCACCTATTTT
GGCTATGCCGTCTTGATTCTCTTTGGGCACATTCGTGATTTTTTTGGAAG
GTTGTTTGGGGTGTCACGGTACTTGGCCACGCAGCCTCCACCGGGTTACG
CGCCGCTGTTGAAGGATTGGGAGAATTTTTACACCCGGCGACTGTATCAT
CGGATCAGGGATTGCTGGGAGAGGCCAGTGTGTAGTGCCCCGGGGGGAAG
GATCACAGTTGTGGAACGGGATTCACCGGATGGAAATAAAACGATGGTAT
TGACGGAGCGGACGAGGGAGTGCATGAATTTGGGGAGTTACAATTATTTG
GGATTCGCGGATGATTGGCAGACAAGTTGTAAGGCCGAAGTGATGCCAAC
GCTTGATACCTTGAATAGTTGCTTGTGCTCGGCGAGGATGGATTTGGGGA
CTTCGAAAGCACATGTGGAGCTGGAGGAGTTGGTGGCGCGGTACGTAGGG
AAGGAAGCGGCGTTGGTGTACAATATGGGCTTTGGGACGAATTCAACGAC
GATCCCGGCGTTGGTGGGGAAAGGGAGTTTAATCCTGAGCGACACGATGA
ACCACTCGTCGATCGTGGCGGGGTCGAGGGCAAGTGGTGCTATGGTCCGC
ACGTTTGTCCACAACAATGCGAAGAGTCTTGAGAGGGTGTTGAGGGATGC
GATTGCGGGGGGCATGCCACGGACGCGTCGGCCGTGGAAGAAGATTCTGG
TGATGGTGGAGGGGATCTATTCAATGGAGGGGGAGATTTGTGACCTCAAG
GGCATTGTGGAGGTGGTGAAGAAATTTGGCGCGTATTTGTACGTGGACGA
GGCGCATTCGATAGGGGCGTTGGGAGAGACGGGGAGGGGGATTTGCGAGT
ACGCGGGCGTGGATCCGAAGGATGTGGACGTGATGATGGGGACGTTCACG
AAGAGCTTTGGGGGGATGGGGGGGTACGTCGCAGGGGACCGCAAGATGAT
CCAGTACCTGCGGCGAGCGAGCGCGGGGAGTATGTATCACAATAGCCTGA
GTCCGGTGGTGTGTAAGCAGGTTCACCAGGCCTTGAGGGTGATCATGGGT
GAGGATGGCACAATGACTGGGAGGAGGAAAATTGAGGCTTTGCGGAACAA
CTCGAATCATATGAGGAGGGAGTTGGTGCGGATGGGTTGTCATGTATACG
GTGATTATGACTCGCCGATTATTCCAGTGATGCTTTACAACCCTACGAAG
ATTGCAGCGTTTTCACGAGAGGCGTTTGCGCGCGGGTTGGCGGTGGTGGT
TGTGGGTTTCCCAGCGACGCCGATCGTGTTGTCACGGACCAGGATTTGCG
TGAGTGCGGGGCATACGCGTGAGGAGATTGAGCGGGCGTTGAATGTGATA
GAGGAGTTGGTGGATTTACTAAGGCTGCGGTATGCGAAGAGGGCGATGGG
ATAG
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protein sequence of NO13G01220.1

>NO13G01220.1-protein ID=NO13G01220.1-protein|Name=NO13G01220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=644bp
MGAGSLPSRYFLESLTERHVVPVVCRSSPLADEKKSSSIIMVLTRGKKAK
SDAGGAAPSPSTTSTNGHKFRRASSSSSDATVAPVKTPKSSRSPFAEIKR
LTSFRRSKASEAEPAVETASTSSSSSSSSPSVSPLSPLAVLDRPFSTVEG
LEDHPMSYERGHEIPITWFAAISTYFGYAVLILFGHIRDFFGRLFGVSRY
LATQPPPGYAPLLKDWENFYTRRLYHRIRDCWERPVCSAPGGRITVVERD
SPDGNKTMVLTERTRECMNLGSYNYLGFADDWQTSCKAEVMPTLDTLNSC
LCSARMDLGTSKAHVELEELVARYVGKEAALVYNMGFGTNSTTIPALVGK
GSLILSDTMNHSSIVAGSRASGAMVRTFVHNNAKSLERVLRDAIAGGMPR
TRRPWKKILVMVEGIYSMEGEICDLKGIVEVVKKFGAYLYVDEAHSIGAL
GETGRGICEYAGVDPKDVDVMMGTFTKSFGGMGGYVAGDRKMIQYLRRAS
AGSMYHNSLSPVVCKQVHQALRVIMGEDGTMTGRRKIEALRNNSNHMRRE
LVRMGCHVYGDYDSPIIPVMLYNPTKIAAFSREAFARGLAVVVVGFPATP
IVLSRTRICVSAGHTREEIERALNVIEELVDLLRLRYAKRAMG*
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Synonyms
Publications