jgi.p|Nanoce1779_2|562539, gene_653 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|562539
Unique Namegene_653
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_2:103109..105829 -

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Properties
Property NameValue
TranscriptId562625
ProteinId562539
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_2supercontigscaffold_2:103109..105829 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL032ncniL032Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G00740NO02G00740Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|562539mRNA_653-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|562539mRNA_653Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|562539

>mRNA_653-protein ID=mRNA_653-protein|Name=jgi.p|Nanoce1779_2|562539|organism=Nannochloropsis oceanica|type=polypeptide|length=907bp
MLDAEDARARAILLALVEPADQNLAMLAMDDAAVKAQKAADTSPKTAEAR
MDAYNAISTSSHAPTLLFSSSPSSPLAIYCNAFLCSLARAHTTPLLDKAF
AYLGKMRAISPEELGDGVIPSALARNNLIRTCAIVIRGVGLDGIDGGGRQ
RQQQWHPSASHPPSDITHSRADSKKYVGLGEMLFEEYLQSAHEAIRRQPT
NHALLQTYQTDTPPLLSSTIYLYFQAREFSKTITIFQRMREQFFPCPIIP
DAWATSGVIRAHAHNRSPLEAWSLLQDLTQGPLPVEVILLPGLYKSLAHG
IQRQLAQSRHPMPQALELRRLAHRLLRHMRHVAKLRPPLTLWRVFMKIEA
RFGDWRRVQRYMAVMKEYGWVSGSHEYAILIEALGEGKALKVLAHTQEKM
RREGVPFTYVVYLSIIQAHRKSYDLRGAQAAFEAFIEEPTPRGGKGEIEE
EMAQRANPMEVVTAMMKVYAQAGLPQKAWDLFCQFREGRIGGGGGREGGV
GGKGGPDHVMYSVALRVASNLGGVPMVEKLYKEHRGQVEVEGGAGTEVGL
GLVREGGDGESRKMGGMGWGDGGMRRGSATGKGKDMTLHSVLAAYVDAGQ
WEKAWAMFDGMVAAERAEGGALSIQLYNVLLHGLIRSGRHEEARTLAERA
RAEGVEFDAVTMKILAKAVGAEELWTPPAHVYVLGGMRDREEEAGDEEEE
GKEEWGRRSVPADTVVLDLHRLSVQEAHNLLARTFEVLRSRYDAEVGGEG
REREKTRKDKNQTEDRTENKEKEMVGMELKDEGGEGVQDLLLITGFRRRV
GPGQGAALLADKSMPVIDPCQKDMDDGNALQVAVREFLGAREIYWSSPPS
NPGRLNVQKASLQQYFDRQRKAESEVKFFRLTLFRYIPVASLMALFFLVP
KDGLPL*
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Synonyms
Publications