jgi.p|Nanoce1779_2|594958, gene_6421 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|594958
Unique Namegene_6421
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_15:588689..590891 +

Link to JBrowse

Properties
Property NameValue
TranscriptId595044
ProteinId594958
Product nameAcyl transferase/acyl hydrolase/lysophospholipase
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_15supercontigscaffold_15:588689..590891 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL020ncniL020Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO20G01990NO20G01990Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|594958mRNA_6421-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|594958mRNA_6421Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|594958

>mRNA_6421-protein ID=mRNA_6421-protein|Name=jgi.p|Nanoce1779_2|594958|organism=Nannochloropsis oceanica|type=polypeptide|length=566bp
MQGFLRLAKKMVRRKEEDPHAPVAACGSTAAMTPTTPMKRSHSHESLGIG
RLNEFREQLHDVYESFTPHIQTFDAIREELGTMPMEIPAPVHYPPAPPFT
VDCFDFTVDSDESESGTPPDSPLPAPQPVGPLSLQEEDSSTAPQPARPPT
RHLEYAPGTLPTSFSFACGGWLQFYMFGVAKCLKDHGLHKEAKFSGCSAG
ALTALGLCVEPSSFDKAVEYCKAVCIPRCRGTLFGPFLLHKYVRGCLDYS
GCLDEHWERANGRLSVGVTGLTDFRAIRIEEFASKEELIIALMASAAAFP
LSPPVRRRGKWLIDGGISDFQPVLEARTVTVNPFYFSQADIRPSRYVPAW
WSLLPPSHSGTVDWLYDLGFSDTLRWMRTVNLEARCAARCRKDPSDLLSC
RHRPTRAKHPFDEHNKSSFGRFFGYGRWPILFDLLTMLLVETVWRTTAYT
LIYAELTLKLLYVGICALATEAFAMRWALLAGGMLLAPSLAHMLAALAAI
ITLKLCLDGSAGLGQWRVALELAASLLSVSLFLRSLPIVGNRFHLRKHHK
LFRQSLVYRIMVHII*
back to top
Synonyms
Publications