NO20G01990, NO20G01990 (gene) Nannochloropsis oceanica

Overview
NameNO20G01990
Unique NameNO20G01990
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1698
Alignment locationchr20:589457..591154 +

Link to JBrowse

Properties
Property NameValue
DescriptionVesicular transport proteins alpha beta hydrolase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr20genomechr20:589457..591154 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0006629lipid metabolic process
GO:0016042lipid catabolic process
GO:0009056catabolic process
GO:0006629lipid metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR016035Acyl_Trfase/lysoPLipase
IPR002641Patatin/PLipase_A2-rel
IPR033562PLPL
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO20G01990 vs. NCBI_GenBank
Match: EWM22050.1 (vesicular transport proteins alpha beta hydrolase [Nannochloropsis gaditana])

HSP 1 Score: 876.7 bits (2264), Expect = 3.900e-251
Identity = 438/559 (78.35%), Postives = 474/559 (84.79%), Query Frame = 0
Query:    7 LAKKMVRRKEEDPHAPVAACGSTAAMTPTTPMKRSHSHESLGIGRLNEFREQLHDVYESFTPHIQTFDAIREELGTMPMEIPAPVHYPPAPPFTVDCFDFTVDSDESESGTPPDSPLPAPQPVGPLSLQEEDSSTAPQPARPPTRHLEYAPGTLPTSFSFACGGWLQFYMFGVAKCLKDHGLHKEAKFSGCSAGALTALGLCVEPSSFDKAVEYCKAVCIPRCRGTLFGPFLLHKYVRGCLDYSGCLDEHWERANGRLSVGVTGLTDFRAIRIEEFASKEELIIALMASAAAFPLSPPVRRRGKWLIDGGISDFQPVLEARTVTVNPFYFSQADIRPSRYVPAWWSLLPPSHSGTVDWLYDLGFSDTLRWMRTVNLEARCAARCRKDPSDLLSCRHRPTRAKHPFDEHNKSSFGRFFGYGRWPILFDLLTMLLVETVWRTTAYTLIYAELTLKLLYVGICALATEAFAMRWALLAGGMLLAPSLAHMLAALAAIITLKLCLDGSAGLGQWRVALELAASLLSVSLFLRSLPIVGNRFHLRKHHKLFRQSLVYRIMVHII 566
            L K+  R KE     P AA G            R    +     RL + +EQ +DV    TP ++TF+AIREE+GT  +EIP P+HYPP PP+TVDCFDFT DSDESE GT   +PLP     G L LQ+ DS +  QP RP TRHLEYAPGTLPTSFSFACGGWLQFYMFGVAKCLKDH LH EA+FSGCSAGALTALGLCVEPSSFDKAVEYCKAVCIPRCRGTL GPFLLHKYVRGCLDYSGCL+EHW+RANGRLSV VTGL DFRAIRI +F SKEELI ALMASAAAFPLSPPVRRR KWLIDGG+SDFQPVLE+RTVTVNPFYFSQADIRPSRYVPAWWSLLPPSHSGTVDWLYDLGF DTLRWMR+VNLE++CAARCRKDPSD LSCRHRPTR KHPFD+ NKSSFGRFFGYGRWPILFDL+TMLLV+TVWRTTAY LIY E++LK +YVGICALA EAFAMRWALL GG+LLAPSLAHMLAALAAII++KL LDGSAG  QW VALELAASLLSVSLFLRSLPI+GNR HLRKHHKL+RQSL+YRIMVHII
Sbjct:    6 LKKQPSRDKETYERVPGAAAGGATKTERNQEYIRFADMQE----RLEDLKEQWNDV---ITPRLETFEAIREEIGT--LEIPPPLHYPPEPPYTVDCFDFTADSDESEGGTSIQTPLPTQDAAGRLPLQQSDSES--QPVRPQTRHLEYAPGTLPTSFSFACGGWLQFYMFGVAKCLKDHALHTEARFSGCSAGALTALGLCVEPSSFDKAVEYCKAVCIPRCRGTLLGPFLLHKYVRGCLDYSGCLEEHWQRANGRLSVAVTGLPDFRAIRINDFRSKEELISALMASAAAFPLSPPVRRRNKWLIDGGLSDFQPVLESRTVTVNPFYFSQADIRPSRYVPAWWSLLPPSHSGTVDWLYDLGFCDTLRWMRSVNLESKCAARCRKDPSDPLSCRHRPTREKHPFDQSNKSSFGRFFGYGRWPILFDLMTMLLVQTVWRTTAYVLIYTEISLKFVYVGICALAMEAFAMRWALLTGGVLLAPSLAHMLAALAAIISIKLSLDGSAGRRQWHVALELAASLLSVSLFLRSLPILGNRIHLRKHHKLYRQSLMYRIMVHII 553          
BLAST of NO20G01990 vs. NCBI_GenBank
Match: XP_012205570.1 (hypothetical protein SPRG_10531 [Saprolegnia parasitica CBS 223.65] >KDO23754.1 hypothetical protein SPRG_10531 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 224.9 bits (572), Expect = 6.100e-55
Identity = 148/428 (34.58%), Postives = 221/428 (51.64%), Query Frame = 0
Query:  161 PTSFSFACGGWLQFYMFGVAKCLKDHGLHKEAKFSGCSAGALTALGLCVEPSSFDKAVEYCKAVCIPRCRGTLFGPFLLHKYVRGCLDYSGCLDEHWE-RANGRLSVGVTGLTDFRAIRIEEFASKEELIIALMASAAAFPLSP-PVRRRGKWLIDGGISDFQPVLEARTVTVNPFYFSQADIRPSRYVPAWWSLLPPSHSGTVDWLYDLGFSDTLRWMRTVNLEARCAARCRKDPSDLLSCRHRPTR-AKHPFDEHNKSSFGRFFGYGRWP-ILFDLLTMLLVETVWRTTAYTLIYAELTLK-LLYVGICALATEAFAMRWALLA------------------GGMLLAPSLAHMLAALAAIITLKLCLDGSAGLGQWRVALELAASLLSVSLFLRSLPIVGNRFHLRKHHKLFRQSLVYRIMVHII 566
            P+S+SFAC GWL+ Y FGVAK L+D GLH++A   G S G+L ALGL ++   FD  V       +P  R +L G   +  Y+R  +   G  +   E     +  V  + ++ +R+ R+  F+  E  + A++AS  A P++  P    G+W+ DGGI DFQPV++  TVTV+PFY +QADI+PS+YVP WW++ PP+   ++ WLY+LG +D   W +      R                  P R   H +    ++S GRF GY      + D+L +  V  +W+  A+ L+YAEL ++ +L  G  A    A A +W L A                     LL P L  +L A ++   L++     A + +WR  +       S+SLFLRS+PIVG   H++KH  L   SLVYR++ H +
Sbjct:    5 PSSYSFACSGWLKTYHFGVAKALQDLGLHRDATVLGSSGGSLAALGLALD-GDFDAMVHGVVNDFVPLARASLAGACNVRAYLREAVRRYGNFERITELNETQKCIVVYSSISKWRSRRVSTFSDAEHGVSAVLASCCATPIAGFPFHLNGEWVFDGGIFDFQPVVDETTVTVSPFYCTQADIKPSQYVPMWWAVYPPAPE-SIQWLYELGKADAYAWAKKKGFTTRAVV--------------PPVRWGAHAY----RTSLGRFLGYKFLENKILDVLFVTAVVALWKPLAFGLLYAELWMRAVLSAGHAAAYAFATAGQWTLTAVLAVMMGFFAISALAPYGVNALLGPVLCFLLGAFSSSGRLEM----GAAVDKWRQCVTCVQIACSMSLFLRSIPIVGASVHVKKHKYLVEHSLVYRVITHCV 408          
BLAST of NO20G01990 vs. NCBI_GenBank
Match: XP_008620464.1 (hypothetical protein SDRG_16049 [Saprolegnia diclina VS20] >EQC26097.1 hypothetical protein SDRG_16049 [Saprolegnia diclina VS20])

HSP 1 Score: 223.4 bits (568), Expect = 1.800e-54
Identity = 147/424 (34.67%), Postives = 222/424 (52.36%), Query Frame = 0
Query:  161 PTSFSFACGGWLQFYMFGVAKCLKDHGLHKEAKFSGCSAGALTALGLCVEPSSFDKAVEYCKAVCIPRCRGTLFGPFLLHKYVRGCLDYSGCLDEHWE-RANGRLSVGVTGLTDFRAIRIEEFASKEELIIALMASAAAFPLSP-PVRRRGKWLIDGGISDFQPVLEARTVTVNPFYFSQADIRPSRYVPAWWSLLPPSHSGTVDWLYDLGFSDTLRWMRTVNLEARCAARCRKDPSDLLSCRHRPTR-AKHPFDEHNKSSFGRFFGYGRWP-ILFDLLTMLLVETVWRTTAYTLIYAELTLK-LLYVGICALATEAFAMRWALLAGGMLLAPSLAHMLAA---LAAIITLKLC-----------LDGSAGLGQWRVALELAASLLSVSLFLRSLPIVGNRFHLRKHHKLFRQSLVYRIMVHII 566
            P+S+SFAC GWL+ Y FGVAK L+D GLH++A   G S G+L ALGL ++   FD  V       +P  R +L G   +  Y+R  +   G      E  A  +  V  + ++ +R+ R+  F+  E  + A++AS  A P++  P    G+W+ DGGI DFQPV++  T+TV+PFY +QADI+PS+YVP WW++ PP+   ++ WLY+LG +D   W +  +   R                  P R   H +    ++S GRF GY      + D+L +  V  +W+  A+ L+YAEL  + +L  G  A    A A +W L A   ++    A  + A   +  ++ L LC           L+  A + +WR  +       S+SLFLRS+PIVG   H++KH  L   SLVYR++ H +
Sbjct:    5 PSSYSFACSGWLKTYHFGVAKALQDLGLHRDATVLGSSGGSLAALGLALD-GDFDAMVHGVVNDFVPLARASLAGACNVRAYLREAVRRYGNFQRITELNATQKCIVVYSSISKWRSRRVSTFSDAEHGVKAVLASCCATPIAGFPFHLNGEWVFDGGIFDFQPVVDETTITVSPFYCTQADIKPSQYVPMWWAVYPPAPE-SIQWLYELGKADAYAWAKKKSFTTRAVV--------------PPVRWGAHAY----RTSLGRFLGYKFLENKILDVLFVTAVVALWKPLAFGLLYAELWARAVLSAGHAAAYAFATAGQWTLTAVMAVMMGFFAISVLAPYGVNTLLGLVLCFLLGAFSSSGRLEMEAAVDKWRQCVTCVQIACSMSLFLRSIPIVGASVHVKKHKYLVEHSLVYRVITHCV 408          
BLAST of NO20G01990 vs. NCBI_GenBank
Match: XP_008891978.1 (hypothetical protein PPTG_02585 [Phytophthora parasitica INRA-310] >ETI49646.1 hypothetical protein F443_06479 [Phytophthora parasitica P1569] >ETK89688.1 hypothetical protein L915_06354 [Phytophthora parasitica] >ETL43085.1 hypothetical protein L916_06292 [Phytophthora parasitica] >ETL96268.1 hypothetical protein L917_06162 [Phytophthora parasitica] >ETM49433.1 hypothetical protein L914_06284 [Phytophthora parasitica] >ETN22749.1 hypothetical protein PPTG_02585 [Phytophthora parasitica INRA-310] >ETP19569.1 hypothetical protein F441_06483 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 218.8 bits (556), Expect = 4.400e-53
Identity = 149/427 (34.89%), Postives = 223/427 (52.22%), Query Frame = 0
Query:  163 SFSFACGGWLQFYMFGVAKCLKDHGLHKEAKFSGCSAGALTALGLCVEPSSFDKAVEYCKAVCIPRCRGTLFGPFLLHKYVRGCLDYSGCLDEHWE-RANGRLSVGVTGLTDFRAIRIEEFASKEELIIALMASAAAFPLSP-PVRRRGKWLIDGGISDFQPVLEARTVTVNPFYFSQADIRPSRYVPAWWSLLPPSHSGTVDWLYDLGFSDTLRWMRTVNLEARCAARCRKDPSDLLSCRHRPTRAKHPFDEHNKSSFGRFFGYGRWPILF-DLLTMLLVETVWRTTAYTLIYAELTLKLLYVGICALATEAFAMRWALLAGGMLLAPSLAHMLAALAAIITLKLCLD---------------------GSAGLGQWRVALELAASLLSVSLFLRSLPIVGNRFHLRKHHKLFRQSLVYRIMVHII 566
            SFSFACGGWL+ Y+FGVAK L++  L K A+  GCSAGALTA GL +   +FD   ++     +P+   +L   F +  Y+R  L   G +D+     A+ +L++  T L+  ++ R   F S E L   L+AS  A P++  P +  G+W++DGG+ DFQPV  ++TVT++PFY   ADI+PS YVP WW+L+PP     V+WL+DLG+ D L+W+    L        RKD          P ++ H     N ++ GR  GY      F D L + L   +WR  A+  +Y EL L+ +  G  A+   A A    LL   +++A +LA  LA L    T+   L                       +A    W+       S+ S+SLFL S+P++G +  +++H  L + SLVYR+ +H +
Sbjct:   42 SFSFACGGWLKMYLFGVAKALQEFELEKNARLIGCSAGALTATGLALR-CNFDAIRDHVLHNIVPQAHSSLASYFRVRPYLRDTLARHGGMDQFEALNASQQLTIVYTSLSSLKSRRATTFESAEHLTETLLASCCAPPIAGLPFKLNGEWIMDGGMLDFQPVYNSKTVTISPFYCVGADIKPSVYVPMWWALIPPG-VRDVEWLFDLGYEDGLKWIVKNGLTGG-----RKDVV-------IPNKSTHYAGGWN-TTVGRVVGYRACESHFLDALFIGLFVCLWRPMAFICLYLELYLQAIVSGGKAVVFGAAA---KLLISNIIMA-ALAMALATLGLQDTMLFLLGLAATGFFLGGMVLLVGGLQQASAAASADWQKCRSYMRSITSLSLFLHSMPVIGAKVQIKRHEFLLKHSLVYRVAMHFV 449          
BLAST of NO20G01990 vs. NCBI_GenBank
Match: ETP47505.1 (hypothetical protein F442_06522 [Phytophthora parasitica P10297])

HSP 1 Score: 218.8 bits (556), Expect = 4.400e-53
Identity = 149/427 (34.89%), Postives = 223/427 (52.22%), Query Frame = 0
Query:  163 SFSFACGGWLQFYMFGVAKCLKDHGLHKEAKFSGCSAGALTALGLCVEPSSFDKAVEYCKAVCIPRCRGTLFGPFLLHKYVRGCLDYSGCLDEHWE-RANGRLSVGVTGLTDFRAIRIEEFASKEELIIALMASAAAFPLSP-PVRRRGKWLIDGGISDFQPVLEARTVTVNPFYFSQADIRPSRYVPAWWSLLPPSHSGTVDWLYDLGFSDTLRWMRTVNLEARCAARCRKDPSDLLSCRHRPTRAKHPFDEHNKSSFGRFFGYGRWPILF-DLLTMLLVETVWRTTAYTLIYAELTLKLLYVGICALATEAFAMRWALLAGGMLLAPSLAHMLAALAAIITLKLCLD---------------------GSAGLGQWRVALELAASLLSVSLFLRSLPIVGNRFHLRKHHKLFRQSLVYRIMVHII 566
            SFSFACGGWL+ Y+FGVAK L++  L K A+  GCSAGALTA GL +   +FD   ++     +P+   +L   F +  Y+R  L   G +D+     A+ +L++  T L+  ++ R   F S E L   L+AS  A P++  P +  G+W++DGG+ DFQPV  ++TVT++PFY   ADI+PS YVP WW+L+PP     V+WL+DLG+ D L+W+    L        RKD          P ++ H     N ++ GR  GY      F D L + L   +WR  A+  +Y EL L+ +  G  A+   A A    LL   +++A +LA  LA L    T+   L                       +A    W+       S+ S+SLFL S+P++G +  +++H  L + SLVYR+ +H +
Sbjct:   42 SFSFACGGWLKMYLFGVAKALQEFELEKNARLIGCSAGALTATGLALR-CNFDAIRDHVLHNIVPQAHSSLASYFRVRPYLRDTLARRGGMDQFEALNASQQLTIVYTSLSSLKSRRATTFESAEHLTETLLASCCAPPIAGLPFKLNGEWIMDGGMLDFQPVYNSKTVTISPFYCVGADIKPSVYVPMWWALIPPG-VRDVEWLFDLGYEDGLKWIVKNGLTGG-----RKDVV-------IPNKSTHYAGGWN-TTVGRVVGYRACESHFLDALFIGLFVCLWRPMAFICLYLELYLQAIVSGGKAVVFGAAA---KLLISNIIMA-ALAMALATLGLQDTMLFLLGLAATGFFLGGMVLLVGGLQQASAAASADWQKCRSYMRSITSLSLFLHSMPVIGAKVQIKRHEFLLKHSLVYRVAMHFV 449          
BLAST of NO20G01990 vs. NCBI_GenBank
Match: KUF93950.1 (hypothetical protein AM588_10009984 [Phytophthora nicotianae])

HSP 1 Score: 218.8 bits (556), Expect = 4.400e-53
Identity = 149/427 (34.89%), Postives = 223/427 (52.22%), Query Frame = 0
Query:  163 SFSFACGGWLQFYMFGVAKCLKDHGLHKEAKFSGCSAGALTALGLCVEPSSFDKAVEYCKAVCIPRCRGTLFGPFLLHKYVRGCLDYSGCLDEHWE-RANGRLSVGVTGLTDFRAIRIEEFASKEELIIALMASAAAFPLSP-PVRRRGKWLIDGGISDFQPVLEARTVTVNPFYFSQADIRPSRYVPAWWSLLPPSHSGTVDWLYDLGFSDTLRWMRTVNLEARCAARCRKDPSDLLSCRHRPTRAKHPFDEHNKSSFGRFFGYGRWPILF-DLLTMLLVETVWRTTAYTLIYAELTLKLLYVGICALATEAFAMRWALLAGGMLLAPSLAHMLAALAAIITLKLCLD---------------------GSAGLGQWRVALELAASLLSVSLFLRSLPIVGNRFHLRKHHKLFRQSLVYRIMVHII 566
            SFSFACGGWL+ Y+FGVAK L++  L K A+  GCSAGALTA GL +   +FD   ++     +P+   +L   F +  Y+R  L   G +D+     A+ +L++  T L+  ++ R   F S E L   L+AS  A P++  P +  G+W++DGG+ DFQPV  ++TVT++PFY   ADI+PS YVP WW+L+PP     V+WL+DLG+ D L+W+    L        RKD          P ++ H     N ++ GR  GY      F D L + L   +WR  A+  +Y EL L+ +  G  A+   A A    LL   +++A +LA  LA L    T+   L                       +A    W+       S+ S+SLFL S+P++G +  +++H  L + SLVYR+ +H +
Sbjct:   20 SFSFACGGWLKMYLFGVAKALQEFELEKNARLIGCSAGALTATGLALR-CNFDAIRDHVLHNIVPQAHSSLASYFRVRPYLRDTLARHGGMDQFEALNASQQLTIVYTSLSSLKSRRATTFESAEHLTETLLASCCAPPIAGLPFKLNGEWIMDGGMLDFQPVYNSKTVTISPFYCVGADIKPSVYVPMWWALIPPG-VRDVEWLFDLGYEDGLKWIVKNGLTGG-----RKDVV-------IPNKSMHYAGGWN-TTVGRVVGYRACESHFLDALFIGLFVCLWRPMAFICLYLELYLQAIVSGGKAVVFGAAA---KLLISNIIMA-ALAMALATLGLQDTMLFLLGLAATGFFLGGMVLLVGGLQQASAAASADWQKCRSYMRSITSLSLFLHSMPVIGAKVQIKRHEFLLKHSLVYRVAMHFV 427          
BLAST of NO20G01990 vs. NCBI_GenBank
Match: KUF88172.1 (Patatin phospholipase domain-containing protein 3 [Phytophthora nicotianae])

HSP 1 Score: 218.0 bits (554), Expect = 7.500e-53
Identity = 149/423 (35.22%), Postives = 220/423 (52.01%), Query Frame = 0
Query:  163 SFSFACGGWLQFYMFGVAKCLKDHGLHKEAKFSGCSAGALTALGLCVEPSSFDKAVEYCKAVCIPRCRGTLFGPFLLHKYVRGCLDYSGCLDEHWE-RANGRLSVGVTGLTDFRAIRIEEFASKEELIIALMASAAAFPLSP-PVRRRGKWLIDGGISDFQPVLEARTVTVNPFYFSQADIRPSRYVPAWWSLLPPSHSGTVDWLYDLGFSDTLRWMRTVNLEARCAARCRKDPSDLLSCRHRPTRAKHPFDEHNKSSFGRFFGYGRWPILF-DLLTMLLVETVWRTTAYTLIYAELTLKLLYVG-------------ICALATEAFAMRWALLA--GGMLLAPSLAHMLAALAAIITL--KLCLDGSAGLGQWRVALELAASLLSVSLFLRSLPIVGNRFHLRKHHKLFRQSLVYRIMVHII 566
            SFSFACGGWL+ Y+FGVAK L++  L K A+  GCSAGALTA GL +   +FD   ++     +P+   +L   F +  Y+R  L   G +D+     A+ +L++  T L+  ++ R   F S E L   L+AS  A P++  P +  G+W++DGG+ DFQPV  ++TVT++PFY   ADI+PS YVP WW+L+PP     V+WL+DLG+ D L+W+    L        RKD          P ++ H     N ++ GR  GY      F D L + L   +WR  A+  +Y EL L+ +  G             I  +   A AM  A L     ML    LA     L  ++ L   L    +A    W+       S+ S+SLFL S+P++G +  +++H  L + SLVYR+ +H +
Sbjct:   20 SFSFACGGWLKMYLFGVAKALQEFELEKNARLIGCSAGALTATGLALR-CNFDAIRDHVLHNIVPQAHSSLASYFRVRPYLRDTLARHGGMDQFEALNASQQLTIVYTSLSSLKSRRATTFESAEHLTETLLASCCAPPIAGLPFKLNGEWIMDGGMLDFQPVYNSKTVTISPFYCVGADIKPSVYVPMWWALIPPG-VRDVEWLFDLGYEDGLKWIVKNGLTGG-----RKDVV-------IPNKSTHYAGGWN-TTVGRVVGYRACESHFLDALFIGLFVCLWRPMAFICLYLELYLQAIVSGGKAVVFGAAAKLXISNIIMAALAMALATLGLQDTMLFLLGLAATGFFLGGMVLLVGGLQQASAAASADWQKCRSYMRSITSLSLFLHSMPVIGAKVQIKRHEFLLKHSLVYRVAMHFV 427          
BLAST of NO20G01990 vs. NCBI_GenBank
Match: POM61481.1 (Patatin-like phosphoLipase [Phytophthora palmivora var. palmivora])

HSP 1 Score: 216.5 bits (550), Expect = 2.200e-52
Identity = 153/441 (34.69%), Postives = 229/441 (51.93%), Query Frame = 0
Query:  151 RHLEYAPGTLPT-SFSFACGGWLQFYMFGVAKCLKDHGLHKEAKFSGCSAGALTALGLCVEPSSFDKAVEYCKAVCIPRCRGTLFGPFLLHKYVRGCLDYSGCLDEHWERAN--GRLSVGVTGLTDFRAIRIEEFASKEELIIALMASAAAFPLSP-PVRRRGKWLIDGGISDFQPVLEARTVTVNPFYFSQADIRPSRYVPAWWSLLPPSHSGTVDWLYDLGFSDTLRWMRTVNLEARCAARCRKDPSDLLSCRHRPTRAKHPFDEHNKSSFGRFFGYGRWPILF-DLLTMLLVETVWRTTAYTLIYAELTLKLLYVGICALATEAFAMRWALLAGGMLLAPSLAHMLAALAAIITLKLCLD---------------------GSAGLGQWRVALELAASLLSVSLFLRSLPIVGNRFHLRKHHKLFRQSLVYRIMVHII 566
            RH++      PT SFSFACGGWL+ Y+FGVAK L++  L K+A+  GCSAGALTA GL +    F+   ++     +P+   +L G F +  Y+R  L   G L + +E  N   +L++  + L+  ++ R   F S E L   L+AS  A P++  P +  G+W++DGG+ DFQPV + RTVT++PFY   ADI+PS YVP WW+L+PP     V+WL+DLG+ D L+W+    L        RK+          P ++    D  N ++ GR  GY      F D L + L   +WR  A+  +Y EL L+ +  G  A+   A A    LL   +++A  LA  LA L    T+   L                      G+     W+       S+ S+SLFL S+P++G++  +++H  L   SLVYR+ +H +
Sbjct:    5 RHIKRVSNADPTLSFSFACGGWLKMYLFGVAKALQEFELEKDARLIGCSAGALTATGLALH-CDFNAIRDHVLHNVVPQAHASLAGYFRVRPYLRDTLVRHGGLHK-FEALNTSQQLTIVYSSLSSLKSRRATTFESTEHLTETLLASCCAPPIAGLPFKLNGEWIMDGGMLDFQPVYDERTVTISPFYCVGADIKPSVYVPMWWALIPPG-VRDVEWLFDLGYEDGLKWIVKKGLTGG-----RKNIV-------IPDKSTKYADGWN-TTVGRVVGYRACESHFLDALFIGLFVCLWRPMAFMCLYFELYLQAIVSGSKAVVFGAAA---KLLISNIIMA-GLALALATLGLQHTMLFLLGLTATGFFLGCMVLLVGGLQQAGAVASADWQRCRSYMRSITSLSLFLHSMPVIGSKVQIKRHEFLLEHSLVYRVAMHFV 425          
BLAST of NO20G01990 vs. NCBI_GenBank
Match: OQR87288.1 (patatin-like phospholipase [Achlya hypogyna])

HSP 1 Score: 215.3 bits (547), Expect = 4.800e-52
Identity = 147/424 (34.67%), Postives = 215/424 (50.71%), Query Frame = 0
Query:  161 PTSFSFACGGWLQFYMFGVAKCLKDHGLHKEAKFSGCSAGALTALGLCVEPSSFDKAVEYCKAVCIPRCRGTLFGPFLLHKYVRGCLDYSGCLDEHWE-RANGRLSVGVTGLTDFRAIRIEEFASKEELIIALMASAAAFPLSP-PVRRRGKWLIDGGISDFQPVLEARTVTVNPFYFSQADIRPSRYVPAWWSLLPPSHSGTVDWLYDLGFSDTLRWMRTVNLEARCAARCRKDPSDLLSCRHRPTR-AKHPFDEHNKSSFGRFFGYGRWP-ILFDLLTMLLVETVWRTTAYTLIYAELTLK-LLYVGICALATEAFAMRWALLAGGMLLAPSLAHMLAA-------LAAIITLKLC-------LDGSAGLGQWRVALELAASLLSVSLFLRSLPIVGNRFHLRKHHKLFRQSLVYRIMVHII 566
            PTS+SFAC GWL+ Y FGVAK L+D GLHK A   G S G+L ALGL ++   FD  V       +P  R +L G   +  Y+R  +   G  +   E  A  R  V  + ++ +R+ R+  F +      A++AS  A P++  P R  G+W+ DGGI DFQPV++A T+TV+PFY + ADI+PS+YVP WW++ PP+   ++ WLY+LG  D + W +   L  R                  P R   H +    ++S GRF GY      L D L +  V  +W+  A+ L+Y EL ++ +             A +W L A   + A   A  + A       L  ++   LC       L+  A + +WR  +     + S+SLFLRS+PIVG    L+KH  L   S+VYR++ H +
Sbjct:    5 PTSYSFACSGWLKTYHFGVAKALQDLGLHKGATVLGSSGGSLAALGLALD-CDFDAMVGGVVQDFVPLARASLGGACNVRSYLREAIARYGNFERITELNATERCVVVYSSISKWRSRRVTRFRNATHATDAVLASCCATPIAGFPFRIDGEWVFDGGIFDFQPVVDASTITVSPFYCTTADIKPSQYVPMWWAVYPPAPE-SIQWLYELGQRDAIAWAKAKGLTTRTVV--------------PPVRWGAHSY----RTSLGRFLGYRFLENKLLDALFVTAVVALWKPLAFGLLYTELWVRAVXXXXXXXXXXXXXAGQWTLSAVIAVAAGFAALSVVAPVGLNPLLGLVVCFLLCAFSSTGRLELEAAVSKWRQCITCVQIVFSMSLFLRSIPIVGASVALKKHKFLVEHSVVYRLITHCV 408          
BLAST of NO20G01990 vs. NCBI_GenBank
Match: XP_009519109.1 (hypothetical protein PHYSODRAFT_487980 [Phytophthora sojae] >EGZ23821.1 hypothetical protein PHYSODRAFT_487980 [Phytophthora sojae])

HSP 1 Score: 214.2 bits (544), Expect = 1.100e-51
Identity = 153/425 (36.00%), Postives = 217/425 (51.06%), Query Frame = 0
Query:  163 SFSFACGGWLQFYMFGVAKCLKDHGLHKEAKFSGCSAGALTALGLCVEPSSFDKAVEYCKAVCIPRCRGTLFGPFLLHKYVRGCLDYSGCLDEHWERAN--GRLSVGVTGLTDFRAIRIEEFASKEELIIALMASAAAFPLSP-PVRRRGKWLIDGGISDFQPVLEARTVTVNPFYFSQADIRPSRYVPAWWSLLPPSHSGTVDWLYDLGFSDTLRWMRTVNLEARCAARCRKDPSDLLSCRHRPTRAKHPFDEHNKSSFGRFFGY-GRWPILFDLLTMLLVETVWRTTAYTLIYAELTL----------------KLLYVGICALATEAFAMRWALLAGGMLLAPSLAHMLAALAAIITL--KLCLDGSAGLGQWRVALELAASLLSVSLFLRSLPIVGNRFHLRKHHKLFRQSLVYRIMVHII 566
            SFSFACGGWL+ Y+FGVAK L+   L K A+  GCSAGALTA GL +    FD   ++     +P+   +L G F +  Y+R  L   GCL + +E  N   +L+V  T L+  ++ R   F S E L   L+AS  A P++  P +  G+W++DGGI DFQPV + +TV ++PFY   ADI+PS YVP WW+L+PP     V+WL+DLG+ D L+W+    +E   A   + D          PT++       N ++ GR  GY G      D L + L   +WR  A+  +Y EL L                KLL   I   AT A  +    L   ML    L  M   L  ++ L   L   G+     W+       S+ S+SLFL S+P++G+    ++   L  QSLVYR+ +H +
Sbjct:    9 SFSFACGGWLKMYLFGVAKALQQFELEKRARLIGCSAGALTATGLAL-GCDFDAIRDHVLLNIVPQAHASLAGYFRVRPYLRDTLACHGCL-QKFEAINTSQQLTVVYTSLSTLKSRRATTFESAEHLTETLLASCCAPPIAGLPCKLNGEWVMDGGIFDFQPVYDDKTVAISPFYCVGADIKPSVYVPMWWALIPPG-VRDVEWLFDLGYEDGLKWI----VEKGLAGGRKVD---------IPTKSTEYAGGWN-TTIGRVVGYRGCESRFLDALFVGLFVCLWRPMAFMCLYLELYLQAIVSGGKAVVFGAAAKLLITNIIMAAT-AVTLATLGLQHTMLFLLGLGAMGFFLGGMVLLVGGLQQAGAVASADWQRCRSYMRSITSLSLFLHSMPVIGSSVEFKRREFLLEQSLVYRVAMHFV 415          
The following BLAST results are available for this feature:
BLAST of NO20G01990 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22050.13.900e-25178.35vesicular transport proteins alpha beta hydrolase ... [more]
XP_012205570.16.100e-5534.58hypothetical protein SPRG_10531 [Saprolegnia paras... [more]
XP_008620464.11.800e-5434.67hypothetical protein SDRG_16049 [Saprolegnia dicli... [more]
XP_008891978.14.400e-5334.89hypothetical protein PPTG_02585 [Phytophthora para... [more]
ETP47505.14.400e-5334.89hypothetical protein F442_06522 [Phytophthora para... [more]
KUF93950.14.400e-5334.89hypothetical protein AM588_10009984 [Phytophthora ... [more]
KUF88172.17.500e-5335.22Patatin phospholipase domain-containing protein 3 ... [more]
POM61481.12.200e-5234.69Patatin-like phosphoLipase [Phytophthora palmivora... [more]
OQR87288.14.800e-5234.67patatin-like phospholipase [Achlya hypogyna][more]
XP_009519109.11.100e-5136.00hypothetical protein PHYSODRAFT_487980 [Phytophtho... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL021nonsL021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR020ncniR020Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR067ngnoR067Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002738NSK002738Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO20G01990.1NO20G01990.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|594958gene_6421Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100052g28gene8397Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO20G01990.1NO20G01990.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO20G01990 ID=NO20G01990|Name=NO20G01990|organism=Nannochloropsis oceanica|type=gene|length=1698bp
ATGCAGGGTTTTCTTCGCTTAGCGAAAAAGATGGTTAGGAGGAAGGAGGA
GGACCCCCATGCCCCGGTGGCAGCCTGCGGGTCGACAGCGGCAATGACGC
CGACGACACCGATGAAAAGGTCTCATAGCCATGAATCTCTGGGCATTGGG
CGCCTTAACGAGTTCAGGGAGCAGTTGCACGATGTGTACGAGTCTTTCAC
CCCGCACATCCAGACGTTTGACGCTATCCGAGAGGAACTGGGCACAATGC
CGATGGAGATCCCGGCCCCGGTGCACTACCCGCCCGCACCGCCGTTCACA
GTGGACTGTTTCGACTTTACCGTGGACTCGGACGAGTCGGAGAGTGGCAC
ACCGCCAGATTCACCCCTGCCCGCCCCCCAGCCCGTGGGACCCCTCAGTT
TGCAGGAAGAAGATTCTTCGACAGCCCCGCAGCCGGCCCGACCCCCAACC
CGACACCTCGAATATGCACCAGGCACGCTGCCTACCTCCTTCAGCTTTGC
TTGCGGGGGTTGGCTGCAGTTTTATATGTTTGGGGTTGCGAAGTGCCTCA
AGGATCACGGTTTGCACAAAGAGGCAAAGTTCTCGGGTTGTTCAGCGGGG
GCGCTGACGGCGCTAGGGTTGTGCGTGGAGCCCAGCTCGTTCGACAAGGC
TGTCGAGTACTGCAAGGCAGTATGTATTCCTCGCTGTCGCGGTACATTGT
TTGGGCCGTTTTTGCTCCATAAATACGTGCGTGGCTGCTTAGATTACAGT
GGATGTTTGGACGAGCACTGGGAGCGCGCCAACGGTCGGCTGTCGGTTGG
AGTGACGGGCCTGACCGACTTCCGGGCCATCCGCATCGAAGAATTTGCAT
CTAAGGAGGAGCTCATTATCGCGCTCATGGCATCAGCCGCTGCATTTCCC
CTGTCGCCGCCAGTGCGACGCCGGGGTAAGTGGCTGATCGACGGGGGCAT
CTCCGACTTCCAGCCTGTGCTGGAGGCACGAACTGTGACTGTGAACCCCT
TCTATTTCTCCCAAGCTGACATCCGACCCTCGCGCTATGTCCCCGCCTGG
TGGTCACTGCTACCGCCCTCCCACTCGGGCACGGTGGACTGGCTCTATGA
CCTTGGCTTCTCGGACACCCTGCGGTGGATGCGAACAGTCAACCTCGAGG
CGAGGTGCGCCGCCCGCTGCCGGAAGGACCCCTCCGACCTCCTCTCCTGT
CGACACCGGCCCACGCGGGCGAAGCACCCGTTCGATGAGCATAACAAGTC
GTCTTTTGGCCGCTTTTTCGGGTATGGACGCTGGCCTATTCTGTTTGACT
TGCTGACCATGCTGCTCGTGGAAACTGTTTGGCGCACCACCGCCTACACC
CTCATTTATGCTGAGCTCACCCTCAAGCTCCTCTACGTTGGCATCTGTGC
ACTTGCCACCGAGGCCTTTGCCATGCGATGGGCTCTTCTTGCCGGGGGGA
TGCTGCTAGCCCCGTCACTCGCGCATATGCTTGCTGCCCTGGCTGCCATC
ATCACCCTCAAACTCTGCCTGGACGGCTCGGCGGGTTTGGGGCAATGGCG
GGTGGCCTTGGAGCTGGCTGCTTCCCTATTGAGTGTCAGTCTCTTCCTGC
GTTCGCTTCCTATCGTGGGTAACAGGTTTCATTTACGGAAGCACCACAAG
CTATTTCGGCAGTCCCTCGTGTACCGGATCATGGTTCACATCATTTAA
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protein sequence of NO20G01990.1

>NO20G01990.1-protein ID=NO20G01990.1-protein|Name=NO20G01990.1|organism=Nannochloropsis oceanica|type=polypeptide|length=566bp
MQGFLRLAKKMVRRKEEDPHAPVAACGSTAAMTPTTPMKRSHSHESLGIG
RLNEFREQLHDVYESFTPHIQTFDAIREELGTMPMEIPAPVHYPPAPPFT
VDCFDFTVDSDESESGTPPDSPLPAPQPVGPLSLQEEDSSTAPQPARPPT
RHLEYAPGTLPTSFSFACGGWLQFYMFGVAKCLKDHGLHKEAKFSGCSAG
ALTALGLCVEPSSFDKAVEYCKAVCIPRCRGTLFGPFLLHKYVRGCLDYS
GCLDEHWERANGRLSVGVTGLTDFRAIRIEEFASKEELIIALMASAAAFP
LSPPVRRRGKWLIDGGISDFQPVLEARTVTVNPFYFSQADIRPSRYVPAW
WSLLPPSHSGTVDWLYDLGFSDTLRWMRTVNLEARCAARCRKDPSDLLSC
RHRPTRAKHPFDEHNKSSFGRFFGYGRWPILFDLLTMLLVETVWRTTAYT
LIYAELTLKLLYVGICALATEAFAMRWALLAGGMLLAPSLAHMLAALAAI
ITLKLCLDGSAGLGQWRVALELAASLLSVSLFLRSLPIVGNRFHLRKHHK
LFRQSLVYRIMVHII*
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Synonyms
Publications