jgi.p|Nanoce1779_2|245154, gene_563 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|245154
Unique Namegene_563
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_3:1365589..1367892 -

Link to JBrowse

Properties
Property NameValue
TranscriptId245240
ProteinId245154
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_3supercontigscaffold_3:1365589..1367892 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL047ncniL047Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G05300NO01G05300Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|245154mRNA_563-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|245154mRNA_563Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|245154

>mRNA_563-protein ID=mRNA_563-protein|Name=jgi.p|Nanoce1779_2|245154|organism=Nannochloropsis oceanica|type=polypeptide|length=604bp
MSTPPGRSNTTALARISSDEQWLRDFREAKQSILTSTTAHNLATSPPPRR
TAELNLGDGQLQREITSIVEMPRLERAAAASERKGDDDPSKWVDEQSDVR
VNCVPAADPLSPSGVSSRASSPNSTSSSEENNDDERSASSCRSRSRANPI
TSTPSLHSSSSSSSSSPSSSSSSSFSSPPQSQFFDASMANKPFSFAEELQ
WPRKQDQQFWQHQPQEQPQPAQTFSIPFTRAATTPAAAHSTSLLAMLQEE
KEQGRQQAARIKELELACVEIQQECQVAIAAARLESHELKCMLRRMASES
TFADVFQVYEAHIARVEQEVQILRARNIHLEERRQQHQSHQQQQEQQRQQ
EEEEKEEEEEEEGLQPTSVGQNDDGEGHDHSINDGEEDRDGSIHHNGNSS
LERRGLLSVGTTAAAKLRQSLKARSDVVYHHGKCRGHECKPSSSTNAKSK
HSISGAVNGTPKQYEAGRSTATASMTALRCRIKDLQRQVDDFKKETGELR
RRERQSLVQKRVVETTWARVMKVQAMAKGLEGSLASSRLEGARAEARLEE
AEEEIRVLRQREAALVLDRDKLLLELDLLHRKQLGGGGNGPSSRQGGESR
ETR*
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Synonyms
Publications