jgi.p|Nanoce1779_2|512371, gene_5158 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|512371
Unique Namegene_5158
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_12:602976..603389 -

Link to JBrowse

Properties
Property NameValue
TranscriptId512457
ProteinId512371
Product nameLongin-like domain-containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_12supercontigscaffold_12:602976..603389 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0006886intracellular protein transport
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005047signal recognition particle binding
GO:0005525GTP binding
Vocabulary: Cellular Component
TermDefinition
GO:0005785signal recognition particle receptor complex
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL010ncniL010Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G02620NO11G02620Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|512371mRNA_5158-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|512371mRNA_5158Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|512371

>mRNA_5158-protein ID=mRNA_5158-protein|Name=jgi.p|Nanoce1779_2|512371|organism=Nannochloropsis oceanica|type=polypeptide|length=138bp
MLDQAWIFKKNGAVLWSRSLVAIKGPPGGFLGGSIVNHLIRTVLLEEKAG
AAQATLDKHICKWALSNELPGVVFVLVYNKGVFHNLTYVDDFLLRLKEDF
LAHFTSARLSAAVGKVEYDARFTKILAAVEARARALKR
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Synonyms
Publications