jgi.p|Nanoce1779_2|587704, gene_4738 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|587704
Unique Namegene_4738
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_9:515435..517370 +

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Properties
Property NameValue
TranscriptId587790
ProteinId587704
Product nameRad1/Rec1/Rad17
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_9supercontigscaffold_9:515435..517370 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008853exodeoxyribonuclease III activity
GO:0003684damaged DNA binding
GO:0004527exonuclease activity
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL006ncniL006Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO15G01880NO15G01880Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|587704mRNA_4738-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|587704mRNA_4738Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|587704

>mRNA_4738-protein ID=mRNA_4738-protein|Name=jgi.p|Nanoce1779_2|587704|organism=Nannochloropsis oceanica|type=polypeptide|length=231bp
MVPSLAVSGPDRMEQGTQGQGEPLFSCRIDNAKVVTATLTCLSNGSKKDQ
LAQVEVNEDGIVFIVTGRAKFTQSQGTINRSLFQAFQCQPQGGRFTVDLN
LLLECLQVFGAASLASTMLTMSYEPNQAVLRLTLEEQGVLTTCDIHAIEE
GEDALDLAALASAFRSSPEVLRAILKSEVLKEAISDLSDLPGAGSVRVAV
APQEPHFHLTAGGVYGALEIFLPRSSEVKF*
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Synonyms
Publications