NO15G01880, NO15G01880 (gene) Nannochloropsis oceanica

Overview
NameNO15G01880
Unique NameNO15G01880
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1807
Alignment locationchr15:528864..531211 +

Link to JBrowse

Properties
Property NameValue
DescriptionCell cycle checkpoint protein RAD1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:528864..531211 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0000077DNA damage checkpoint
GO:0000077DNA damage checkpoint
Vocabulary: INTERPRO
TermDefinition
IPR003021Rad1_Rec1_Rad17
Homology
BLAST of NO15G01880 vs. NCBI_GenBank
Match: CBJ26505.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 274.6 bits (701), Expect = 4.000e-70
Identity = 140/284 (49.30%), Postives = 198/284 (69.72%), Query Frame = 0
Query:    9 GP-DRMEQGTQGQGEPLFSCRIDNAKVVTATLTCLSNGSKKDQLAQVEVNEDGIVFIVTGRAKFTQSQGTINRSLFQAFQCQPQGGRFTVDLNLLLECLQVFGAASLASTMLTMSYEPNQAVLRLTLEEQGVLTTCDIHALEEGEDALDLAALASAFRSSPEVLRAILKSEVLKEAISDLSDLPGAGSVRVAVAPQEPHFHLAAGGVYGALEIFLPRSSEAFVHFDCSEAR-AWSYGLGALNQGMRALTVAKETYMRINEEGILCVQHQVENTASGHSTFIDFL 291
            GP  R E+  +   E +FSCR+DNAK +T  L+CLS+G++KDQ AQ EV ++ +  +V+GRAK+TQ+QG+++ SLFQ + C  +G +F ++L  LLECLQ+FG  SLA T ++M+Y+  +A  RLTLEE GV T+C+I  + + E+A++ + LA AF  S EV R ILKSE+LKEA  +L+DL GA SV V    + PH  L+A G  G+ EI  P+SSEAFV F+C+  R +W+Y +  +  GMRAL  A ETY R+NEEGILC+QHQ+   + G ++F+D L
Sbjct:   97 GPGQRGEEEDEESDEVIFSCRLDNAKSITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDC-VEGAKFGINLTTLLECLQIFGPGSLAQTSVSMAYQEARATFRLTLEEGGVFTSCEIRTIHQDEEAMEFSTLAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEAPHLQLSAKGSNGSSEIDFPKSSEAFVCFECTARRVSWTYLMTGMETGMRALGHANETYFRVNEEGILCIQHQIP-MSMGQTSFVDVL 378          
BLAST of NO15G01880 vs. NCBI_GenBank
Match: XP_009033140.1 (hypothetical protein AURANDRAFT_70730 [Aureococcus anophagefferens] >EGB12044.1 hypothetical protein AURANDRAFT_70730 [Aureococcus anophagefferens])

HSP 1 Score: 178.3 bits (451), Expect = 3.900e-41
Identity = 101/285 (35.44%), Postives = 164/285 (57.54%), Query Frame = 0
Query:   25 FSCRIDNAKVVTATLTCLSNGSKKDQLAQVEVNEDGIVFIVTGRAKFTQSQGTINRSLFQAFQCQPQGG------------RFTVDLNLLLECLQVFGAASLASTMLTMSYEPNQAVLRLTLEEQGVLTTCDIHALEEGEDALDLAALASAFRSSPEVLRAILKSEVLKEAISDLSD-LPGAGSVRVAVAPQEPHFHLAAGGVYGALEIFLPRSSEAFVHFDC-SEARAWSYGLGALNQGMRALTVAKETYMRINEEGILCVQHQVEN-TASGHSTFIDFLCLAE 295
            FS R+D+A +VT+ + CL    + + +A + ++  G+   V GR+K T +  T+  S F AF C  + G             F+VD+  L+ECL++FGAA  A   +++SY P   V +LTLEE G  T+CD+H LE+  D      +A AFR +P   + +  S  L++ ++D  +   G+ +++V+V     HF LAA G  G ++I +PR  +AFV F+   E R+W+Y   A   GM+AL  + ETY+R+N+ G+L VQH V N   +G + ++++LC ++
Sbjct:    4 FSARLDSAALVTSLIECLIEEKRSEVVAHIAIDAAGLELHVVGRSKSTHATLTLPVSCFAAFDCVDETGAPFVRGGDQEPIAFSVDVRALVECLKLFGAAG-ADLEVSLSYAPATEVFKLTLEEPGAFTSCDVHVLEDSNDLEGATDMAGAFRDAPTAAKTLATSATLRDVVADFDESAVGSSTIKVSV-----HFRLAASGSVGCVQIDVPR--DAFVVFEAPEETRSWTYQTQAFLHGMKALPHSHETYVRVNDHGMLLVQHMVANDRGAGDNMYLEYLCCSD 280          
BLAST of NO15G01880 vs. NCBI_GenBank
Match: ETO85305.1 (hypothetical protein F444_00949 [Phytophthora parasitica P1976])

HSP 1 Score: 166.8 bits (421), Expect = 1.200e-37
Identity = 98/305 (32.13%), Postives = 162/305 (53.11%), Query Frame = 0
Query:   23 PLFSCRIDNAKVVTATLTCLSNGSKKDQLAQVEVNEDGIVFIVTGRAKFTQSQGTINRSLFQAFQCQPQGGR-----------------FTVDLNLLLECLQVFGAASLASTMLTMSYEPNQAVLRLTLEEQGVLTTCDIHALEEGEDALDLAALASAFRSSPEVLRAILKSEVLKEAISDLSDLPGAGSVRVAV------APQEPHFHLAAGGVYGALEIFLPRSSEAFVHFDCSEARAWSYG--------LGALNQGMRALTVAKETYMRINEEGILCVQHQVENTASGHSTFIDFLCLAEET 297
            P  +C  ++ K++   L+CL++G K+DQ  + +V+  G++F    + K  Q + +I R LF++++    G                   F +++NLL+ECL +FG ++LA+T L M+YEP  A L L +E+ GV+  C +  LE     +      +AF  S  V R I++SE L++A ++L DLP A SV +A+      +P+     L+A    G+ EI    +S AF+ F C+ +    YG        +  L Q  +ALT + ET++R+N +G L +QH +E + SG   F+D L   E+T
Sbjct:   23 PTLTCTTESVKILVTLLSCLAHG-KRDQRVRCDVDRRGLLFTAHSKGKSLQIKTSIGRELFESYKFGATGPESAEEYEDEDDEDAVQLSFALNVNLLIECLSMFGPSALATTSLRMTYEPESASLLLVVEDSGVMCECSMQVLEHEGGDMGQLEFETAFEQSAVVARCIMQSEPLRDAFAELYDLPSAASVTIAMVDTDSRSPEAKCLSLSATSETGSCEIDFAPTSSAFIEFSCAPSSEGDYGGSCAATFHVAVLQQAFKALTHSNETFLRMNGDGFLSIQHMIE-SGSGDKAFVDALISPEDT 325          
BLAST of NO15G01880 vs. NCBI_GenBank
Match: ETL49733.1 (hypothetical protein L916_00870 [Phytophthora parasitica])

HSP 1 Score: 166.4 bits (420), Expect = 1.500e-37
Identity = 98/305 (32.13%), Postives = 162/305 (53.11%), Query Frame = 0
Query:   23 PLFSCRIDNAKVVTATLTCLSNGSKKDQLAQVEVNEDGIVFIVTGRAKFTQSQGTINRSLFQAFQCQPQGGR-----------------FTVDLNLLLECLQVFGAASLASTMLTMSYEPNQAVLRLTLEEQGVLTTCDIHALEEGEDALDLAALASAFRSSPEVLRAILKSEVLKEAISDLSDLPGAGSVRVAV------APQEPHFHLAAGGVYGALEIFLPRSSEAFVHFDCSEARAWSYG--------LGALNQGMRALTVAKETYMRINEEGILCVQHQVENTASGHSTFIDFLCLAEET 297
            P  +C  ++ K++   L+CL++G K+DQ  + +V+  G++F    + K  Q + +I R LF++++    G                   F +++NLL+ECL +FG ++LA+T L M+YEP  A L L +E+ GV+  C +  LE     +      +AF  S  V R I++SE L++A ++L DLP A SV +A+      +P+     L+A    G+ EI    +S AF+ F C+ +    YG        +  L Q  +ALT + ET++R+N +G L +QH +E + SG   F+D L   E+T
Sbjct:   23 PTLTCTTESVKILVTLLSCLAHG-KRDQRVRCDVDRRGLLFTAHSKRKSLQIKTSIGRELFESYKFGATGPESAEEYEDEDDEDAVQLSFALNVNLLIECLSMFGPSALATTSLRMTYEPESASLLLVVEDSGVMCECSMQVLEHEGGDMGQLEFETAFEQSAVVARCIMQSEPLRDAFAELYDLPSAASVTIAMVDTDSRSPEAKCLSLSATSETGSCEIDFAPTSSAFIEFSCAPSSEGDYGGSCAATFHVAVLQQAFKALTHSNETFLRMNGDGFLSIQHMIE-SGSGDKAFVDALISPEDT 325          
BLAST of NO15G01880 vs. NCBI_GenBank
Match: ETI56582.1 (hypothetical protein F443_00937 [Phytophthora parasitica P1569] >ETM56050.1 hypothetical protein L914_00870 [Phytophthora parasitica] >ETP54368.1 hypothetical protein F442_00893 [Phytophthora parasitica P10297])

HSP 1 Score: 164.9 bits (416), Expect = 4.400e-37
Identity = 98/305 (32.13%), Postives = 161/305 (52.79%), Query Frame = 0
Query:   23 PLFSCRIDNAKVVTATLTCLSNGSKKDQLAQVEVNEDGIVFIVTGRAKFTQSQGTINRSLFQAFQCQPQGGR-----------------FTVDLNLLLECLQVFGAASLASTMLTMSYEPNQAVLRLTLEEQGVLTTCDIHALEEGEDALDLAALASAFRSSPEVLRAILKSEVLKEAISDLSDLPGAGSVRVAV------APQEPHFHLAAGGVYGALEIFLPRSSEAFVHFDCSEARAWSYG--------LGALNQGMRALTVAKETYMRINEEGILCVQHQVENTASGHSTFIDFLCLAEET 297
            P  +C  ++ K++   L+CL++G K DQ  + +V+  G++F    + K  Q + +I R LF++++    G                   F +++NLL+ECL +FG ++LA+T L M+YEP  A L L +E+ GV+  C +  LE     +      +AF  S  V R I++SE L++A ++L DLP A SV +A+      +P+     L+A    G+ EI    +S AF+ F C+ +    YG        +  L Q  +ALT + ET++R+N +G L +QH +E + SG   F+D L   E+T
Sbjct:   23 PTLTCTTESGKILVTLLSCLAHG-KCDQRVRCDVDRRGLLFTAHSKGKSLQIKTSIGRELFESYKFGATGPESAEEYEDEDDEDAVQLSFALNVNLLIECLSMFGPSALATTSLRMTYEPESASLLLVVEDSGVMCECSMQVLEHEGGDMGQLEFETAFEQSAVVARCIMQSEPLRDAFAELYDLPSAASVTIAMVDTDSRSPEAKCLSLSATSETGSCEIDFAPTSSAFIEFSCAPSSEGDYGGSCAATFHVAVLQQAFKALTHSNETFLRMNGDGFLSIQHMIE-SGSGDKAFVDALISPEDT 325          
BLAST of NO15G01880 vs. NCBI_GenBank
Match: XP_008890558.1 (hypothetical protein PPTG_00796 [Phytophthora parasitica INRA-310] >ETM02802.1 hypothetical protein L917_00833 [Phytophthora parasitica] >ETN24501.1 hypothetical protein PPTG_00796 [Phytophthora parasitica INRA-310] >ETP26375.1 hypothetical protein F441_00915 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 164.9 bits (416), Expect = 4.400e-37
Identity = 98/305 (32.13%), Postives = 161/305 (52.79%), Query Frame = 0
Query:   23 PLFSCRIDNAKVVTATLTCLSNGSKKDQLAQVEVNEDGIVFIVTGRAKFTQSQGTINRSLFQAFQCQPQGGR-----------------FTVDLNLLLECLQVFGAASLASTMLTMSYEPNQAVLRLTLEEQGVLTTCDIHALEEGEDALDLAALASAFRSSPEVLRAILKSEVLKEAISDLSDLPGAGSVRVAV------APQEPHFHLAAGGVYGALEIFLPRSSEAFVHFDCSEARAWSYG--------LGALNQGMRALTVAKETYMRINEEGILCVQHQVENTASGHSTFIDFLCLAEET 297
            P  +C  ++ K++   L+CL++G K DQ  + +V+  G++F    + K  Q + +I R LF++++    G                   F +++NLL+ECL +FG ++LA+T L M+YEP  A L L +E+ GV+  C +  LE     +      +AF  S  V R I++SE L++A ++L DLP A SV +A+      +P+     L+A    G+ EI    +S AF+ F C+ +    YG        +  L Q  +ALT + ET++R+N +G L +QH +E + SG   F+D L   E+T
Sbjct:   23 PTLTCTTESVKILVTLLSCLAHG-KCDQRVRCDVDRRGLLFTAHSKGKSLQIKTSIGRELFESYKFGATGPESAEEYEDEDDEDAVQLSFALNVNLLIECLSMFGPSALATTSLRMTYEPESASLLLVVEDSGVMCECSMQVLEHEGGDMGQLEFETAFEQSAVVARCIMQSEPLRDAFAELYDLPSAASVTIAMVDTDSRSPEAKCLSLSATSETGSCEIDFAPTSSAFIEFSCAPSSEGDYGGSCAATFHVAVLQQAFKALTHSNETFLRMNGDGFLSIQHMIE-SGSGDKAFVDALISPEDT 325          
BLAST of NO15G01880 vs. NCBI_GenBank
Match: OWZ16663.1 (hypothetical protein PHMEG_0009514 [Phytophthora megakarya])

HSP 1 Score: 163.7 bits (413), Expect = 9.900e-37
Identity = 102/304 (33.55%), Postives = 162/304 (53.29%), Query Frame = 0
Query:   23 PLFSCRIDNAKVVTATLTCLSNGSKKDQLAQVEVNEDGIVFIVTGRAKFTQSQGTINRSLFQAF----------QCQPQGG---RFTVDLNLLLECLQVFGAASLASTMLTMSYEPNQAVLRLTLEEQGVLTTCDIHALEEGEDALDLAALASAFRSSPEVLRAILKSEVLKEAISDLSDLPGAGSVRVAVA---PQEPHFH-------LAAGGVYGALEIFLPRSSEAFVHFDCSEARAWSYG--------LGALNQGMRALTVAKETYMRINEEGILCVQHQVENTASGHSTFIDFLCLAEE 296
            P  +C  ++ K++   L+CLS+G K+DQ  + +V++ G++F    + K  Q + +I R LF ++          +   + G    F ++++LL+ECL +FG A+LA+T L M+YEP  A L L +E+ GV+  C +  LE     L      SAF  S  V R I++SE L++A ++L DLP A SV +A+A    + P  H       L+A    G+ EI    +S AF+ F C+ +    YG        +  L Q  +ALT + ET++R+N  G L +QH +E + SG   F+D L   E+
Sbjct:   22 PTLTCTTESVKILVTLLSCLSHG-KRDQRVRCDVDQRGLLFTAHSKGKSLQIKTSIGRELFDSYKFGSASPEQEEVDEEDGVQLSFALNVSLLIECLSMFGPAALATTSLRMTYEPESASLLLVVEDSGVMCECSMQVLEHEGGDLGELEFESAFEQSAVVARCIMQSEPLRDAFAELYDLPSAASVTIAMADADTRSPDDHSETKCLSLSATSDTGSCEIDFAPTSSAFIEFSCAPSDEGDYGGCCAATFHVAVLQQAFKALTHSNETFLRMNGNGFLSIQHMIE-SGSGDKAFVDALISPED 323          
BLAST of NO15G01880 vs. NCBI_GenBank
Match: XP_009523497.1 (hypothetical protein PHYSODRAFT_557110 [Phytophthora sojae] >EGZ20780.1 hypothetical protein PHYSODRAFT_557110 [Phytophthora sojae])

HSP 1 Score: 161.8 bits (408), Expect = 3.800e-36
Identity = 100/306 (32.68%), Postives = 160/306 (52.29%), Query Frame = 0
Query:   23 PLFSCRIDNAKVVTATLTCLSNGSKKDQLAQVEVNEDGIVFIVTGRAKFTQSQGTINRSLFQAFQC---QPQGGRFTVD-----------LNLLLECLQVFGAASLASTMLTMSYEPNQAVLRLTLEEQGVLTTCDIHALEEGEDALDLAALASAFRSSPEVLRAILKSEVLKEAISDLSDLPGAGSVRVAVAPQEPH----------FHLAAGGVYGALEIFLPRSSEAFVHFDCSEAR--------AWSYGLGALNQGMRALTVAKETYMRINEEGILCVQHQVENTASGHSTFIDFLCLAEET 297
            P  +C  ++ KV+   L+CL++G K+DQ  + +V+  G++F    + K  Q + +I R LF++++     PQ   F  D           ++LL+ECL +FG A+L +T L M+YEP  A L L +E+ GV+  C +  LE     +      SAF  S  V R I++SE L++A ++L DLP A SV +A+A  +              L+A    G+ EI    +S AF+ F C+ A         A ++ +  L Q  +AL  + ET++R+N +G L +QH +E + SG   F+D L   E+T
Sbjct:   18 PTLTCTTESVKVLVMLLSCLAHG-KRDQRVRCDVDRRGLLFTAHSKGKSLQIKTSIGRELFESYKFGAEHPQDDEFVDDEDDVQLSFALNVSLLIECLSMFGPAALPTTSLRMTYEPESASLLLVVEDSGVMCECSMQVLEHEGGDMGQLEFESAFEQSAVVARCIMQSEPLRDAFAELYDLPSAASVTIAMADADSRSPDDTSEAKCLSLSATSETGSCEIDFAPTSSAFIEFSCASASDGDYPGSCAATFHVAVLQQAFKALVHSNETFLRMNSDGFLSIQHMIE-SGSGDKAFVDALISPEDT 321          
BLAST of NO15G01880 vs. NCBI_GenBank
Match: POM75370.1 (Rad1 domain containing hypothetical protein [Phytophthora palmivora var. palmivora])

HSP 1 Score: 159.5 bits (402), Expect = 1.900e-35
Identity = 99/320 (30.94%), Postives = 161/320 (50.31%), Query Frame = 0
Query:    8 SGPDRMEQGTQGQGEPLFSCRIDNAKVVTATLTCLSNGSKKDQLAQVEVNEDGIVFIVTGRAKFTQSQGTINRSLFQAFQ--------------CQPQGGRFTVDLNLLLECLQVFGAASLASTMLTMSYEPNQAVLRLTLEEQGVLTTCDIHALEEGEDALDLAALASAFRSSPEVLRAILKSEVLKEAISDLSDLPGAGSVRVAVAPQEPH----------FHLAAGGVYGALEIFLPRSSEAFVHFDCSEAR-------AWSYGLGALNQGMRALTVAKETYMRINEEGILCVQHQVENTASGHSTFIDFLCLAEET 297
            S  D  E G      P  +C  ++ K++   L+CL++G K+DQ  + +V+  G++F    + K  Q + +I R LF++++                           LL+ECL +FG A+LA+T L M+YEP  A L L +E+ GV+  C +  LE     +      SAF  S  V R I++SE L++A ++L DLP A SV +A+A  +              L+A    G+ EI    +S AF+ F C+ +        A ++ +  L Q ++AL+ + ET++R+N +G L +QH +E + SG   F+D L   E+T
Sbjct:    4 SSDDEHEVGASAAPLPTLTCTTESVKILVTLLSCLAHG-KRDQRVRCDVDRRGLLFTAHSKGKSLQIKTSIGRELFESYKFGSAXXXXXXXXXXXXXXXXXXXXXXXLLIECLSMFGPAALATTSLRMTYEPESASLLLVVEDSGVMCECSMQVLEHEGGDMGQLEFESAFEQSAVVARCIMQSEPLRDAFAELYDLPSAASVTIAMADPDSRSPEGRLEAKCLSLSATSETGSCEIDFAPTSSAFIEFSCASSEGDYGGNCAATFHVAVLQQALKALSHSNETFLRMNGDGFLSIQHMIE-SGSGDKAFVDALISPEDT 321          
BLAST of NO15G01880 vs. NCBI_GenBank
Match: XP_024585304.1 (cell cycle checkpoint protein rad1-like [Plasmopara halstedii] >CEG48935.1 cell cycle checkpoint protein rad1-like [Plasmopara halstedii])

HSP 1 Score: 154.8 bits (390), Expect = 4.600e-34
Identity = 95/305 (31.15%), Postives = 154/305 (50.49%), Query Frame = 0
Query:   27 CRIDNAKVVTATLTCLSNGSKKDQLAQVEVNEDGIVFIVTGRAKFTQSQGTINRSLFQAFQCQPQGG-----------------RFTVDLNLLLECLQVFGAASLASTMLTMSYEPNQAVLRLTLEEQGVLTTCDIHALEEGEDALDLAALASAFRSSPEVLRAILKSEVLKEAISDLSDLPGAGSVRVAVAPQEPH----------FHLAAGGVYGALEIFLPRSSEAFVHFDCSEARAWSYG--------LGALNQGMRALTVAKETYMRINEEGILCVQHQVENTASGHSTFIDFLCLAEET 297
            C  ++ KV+   L+CL  G K+DQ  + +V++ G++F    + K  Q + +I R LF+ ++                        F +++NLL+ECL +FG ++LA+T L M+YEP  A L L +E+ GV+  C +  LE  +  +      SAF  S  V R I++SE L++A ++L DLP A SV +A+A ++              L+A    G+ EI    +S A + F C+ +    YG        +  L Q  +AL  + ET++R+N  G L +QH +E   +G   F+D L   E+T
Sbjct:   18 CTTESVKVLVTLLSCLVYG-KRDQRVRCDVDKRGLLFTAHSKGKSLQIKTSIGRELFETYKFGAADSAIEDXXXXXXXXXXXXLSFALNVNLLIECLSIFGPSALATTSLRMTYEPESASLLLVVEDSGVMCECSVQVLEHEDGDIGQLEFESAFEQSMVVARCIIQSEPLRDAFAELYDLPSAASVTIAMADEDSRNLNDRSEAQCLSLSATSETGSCEIGFSPTSSAIIEFSCAPSSEEKYGGSCAATFHVAVLQQAFKALAFSNETFLRMNGIGFLSIQHMIE-CGTGDKAFVDALISPEDT 320          
The following BLAST results are available for this feature:
BLAST of NO15G01880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBJ26505.14.000e-7049.30conserved unknown protein [Ectocarpus siliculosus][more]
XP_009033140.13.900e-4135.44hypothetical protein AURANDRAFT_70730 [Aureococcus... [more]
ETO85305.11.200e-3732.13hypothetical protein F444_00949 [Phytophthora para... [more]
ETL49733.11.500e-3732.13hypothetical protein L916_00870 [Phytophthora para... [more]
ETI56582.14.400e-3732.13hypothetical protein F443_00937 [Phytophthora para... [more]
XP_008890558.14.400e-3732.13hypothetical protein PPTG_00796 [Phytophthora para... [more]
OWZ16663.19.900e-3733.55hypothetical protein PHMEG_0009514 [Phytophthora m... [more]
XP_009523497.13.800e-3632.68hypothetical protein PHYSODRAFT_557110 [Phytophtho... [more]
POM75370.11.900e-3530.94Rad1 domain containing hypothetical protein [Phyto... [more]
XP_024585304.14.600e-3431.15cell cycle checkpoint protein rad1-like [Plasmopar... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL142nonsL142Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR006ncniR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR063ngnoR063Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001401NSK001401Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO15G01880.1NO15G01880.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO15G01880.2NO15G01880.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|587704gene_4738Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100067g10gene8033Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO15G01880.1NO15G01880.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO15G01880.2NO15G01880.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO15G01880 ID=NO15G01880|Name=NO15G01880|organism=Nannochloropsis oceanica|type=gene|length=1807bp
CCACACCTTGGCCTTCTTATTCTCCACATGCTTTCTGCTGCACGTGCTCA
TTCACATGCACCCGACATATGTCATATACCACCCTCCTTCCCCCTGACAT
TCACCTCTCGACTTCCTTCCTCTTCCCTCCCTCATCCCTCACTACGTCCA
ACACACAGATGGAGCAAGGCACGCAAGGTCAGGGCGAACCCCTCTTCTCC
TGCCGCATCGATAACGCTAAGGTGGTAACAGCCACATTGACTTGTTTAAG
TAATGGCAGCAAGAAGGACCAGCTCGCGCAGGTGGAGGTGAATGAAGATG
gtaagtgtgaggatgggagggaaggaggtattgaagaaggaaatgaagct
agagacaagggaaagggagggatacgatgtaggtggatcctatttgtcct
ctctccctaacgtcattttatttctcatcctctctccctcactcatacag
GCATCGTCTTCATCGTCACGGGCCGGGCCAAGTTCACGCAGgtgcgtggt
gtatgtgggagtgaggcacaaaaattattattatcttcctttcttgcctc
gcagtcagctttgaggccttccactccccgtctcgctcctggtcctcaaa
catctcaagctataaatctttttctccctccctcctttcctccctccctc
cctccctcagTCGCAAGGCACTATCAACAGGTCCCTCTTCCAGGCTTTTC
AATGCCAGCCCCAAGGGGGACGATTCACTGTCGATCTTAATCTGCTTTTG
GAATGTCTACAGGTATTTGGCGCAGCTTCTCTGGCGAGCACGATGCTAAC
CATGTCATATGAGgtgagcgaggttgggaggcagcgcgggggggaggaat
atgcggaaggagtgaactcgcagattttgttacttctttcctacccagcg
agactaatcccccctccctccttctcttcctccctcccttcccctccccc
ctagCCCAACCAGGCCGTCCTCCGCCTCACACTCGAAGAGCAAGGAGTCC
TGACCACGTGCGACATTCACGCGTTAGAAGAAGGAGAAGACGCACTAGAC
CTCGCTGCGCTTGCCTCTGCATTCCGCAGCAGCCCGGAGGTGCTTCGCGC
TATTTTGAAAAGTGAAGTGCTCAAGGAGGCTATCAGTGACTTGTCTGACC
TGCCGGGAGCAGGCTCGGTGAGGGTGGCGGTAGCGCCCCAAGAGCCACAT
TTTCACTTGGCGGCTGGAGGGGTGTATGGTGCACTCGAAATTTTCCTTCC
CAGAAGCAGTGAGgtaaaattttgaaataagaaggaatgacatgtgtgct
gcgactcactcactttctctccttccttcccttcctccctctccctcttt
tcctcccttcttagGCGTTCGTGCATTTTGACTGTTCCGAAGCCCGCGCA
TGGAGTTATGGCCTTGGGGCACTCAATCAGGGAATGCGTGCGCTGACCGT
GGCGAAGGAAACATACATGCGAATTAACGAGGAGGGTATATTGTGCGTGC
AGCACCAGGTGGAAAACACGGCGAGCGGTCACAGTACATTCATCGACTTT
CTGTGCTTGGCGGAGGAGACAGGTGAAGAGGAGCAGAGGGAGCAGGAGGA
GAGAGAGGAGAAGGAGGAGGAGAAAGGGGGAGAGAGCGATGCGGAGAGCA
TGGGAGGGGTTCAGCAGGGAGGAGGGGGGTTTGAGTGAGAGGCCTGGGAC
GGGACGAAGGAGGGTATGTGCATCTGTATAGCTTGTGCGTGTGTGTTGAT
ACGACGAAATGGCTTTGAGAACTAAAAAGAAAGAAGACAGAAGGTCAACA
ATGATAA
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protein sequence of NO15G01880.1

>NO15G01880.1-protein ID=NO15G01880.1-protein|Name=NO15G01880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=335bp
MVPSLAVSGPDRMEQGTQGQGEPLFSCRIDNAKVVTATLTCLSNGSKKDQ
LAQVEVNEDGIVFIVTGRAKFTQSQGTINRSLFQAFQCQPQGGRFTVDLN
LLLECLQVFGAASLASTMLTMSYEPNQAVLRLTLEEQGVLTTCDIHALEE
GEDALDLAALASAFRSSPEVLRAILKSEVLKEAISDLSDLPGAGSVRVAV
APQEPHFHLAAGGVYGALEIFLPRSSEAFVHFDCSEARAWSYGLGALNQG
MRALTVAKETYMRINEEGILCVQHQVENTASGHSTFIDFLCLAEETGEEE
QREQEEREEKEEEKGGESDAESMGGVQQGGGGFE*
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protein sequence of NO15G01880.2

>NO15G01880.2-protein ID=NO15G01880.2-protein|Name=NO15G01880.2|organism=Nannochloropsis oceanica|type=polypeptide|length=353bp
MSYTTLLPPDIHLSTSFLFPPSSLTTSNTQMEQGTQGQGEPLFSCRIDNA
KVVTATLTCLSNGSKKDQLAQVEVNEDGIVFIVTGRAKFTQSQGTINRSL
FQAFQCQPQGGRFTVDLNLLLECLQVFGAASLASTMLTMSYEPNQAVLRL
TLEEQGVLTTCDIHALEEGEDALDLAALASAFRSSPEVLRAILKSEVLKE
AISDLSDLPGAGSVRVAVAPQEPHFHLAAGGVYGALEIFLPRSSEAFVHF
DCSEARAWSYGLGALNQGMRALTVAKETYMRINEEGILCVQHQVENTASG
HSTFIDFLCLAEETGEEEQREQEEREEKEEEKGGESDAESMGGVQQGGGG
FE*
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Synonyms
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