jgi.p|Nanoce1779_2|437487, gene_4613 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|437487
Unique Namegene_4613
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_9:192568..198477 +

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Properties
Property NameValue
TranscriptId437573
ProteinId437487
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_9supercontigscaffold_9:192568..198477 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL006ncniL006Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO15G00630NO15G00630Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|437487mRNA_4613-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|437487mRNA_4613Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|437487

>mRNA_4613-protein ID=mRNA_4613-protein|Name=jgi.p|Nanoce1779_2|437487|organism=Nannochloropsis oceanica|type=polypeptide|length=1928bp
MKKSGSHTPNQSHKLPPSNTYALTLTPLPPHIPQLAHRYDPSSPFVARRT
SAFGVGDALLSAPPVSTMSTRARKRLQPDQQQHSYKVGDRVLTAKDGQAG
TVQFVGQTEFASGKWVGIALDYGSGKNDGAVGGRRYFDCAPAHGIFVREA
QISLVVTASRGGSMSSASAAHCFSSSSTRAEKPGEGDADADTTADAGTAG
APRVTRSKLADLKEKRSAVLQKARDINKPLPSSSSSSSSSSSSSSSSVSP
TSSSTAAASTFRRQIQAPNGGSLRSHHPSSSSSSSLSSSSSSSSFSKGRR
ASLTVGAGGGGEGGRVGEHGDLNASLTEAQRQLPPFSEPMEEDEEEEQEL
CKKSATAKAQAASSTSSPSSSASSSTSSSSSAAAMEENTSPLPTTSNTNT
TTNTTTNTTTNTTTNSISDSISNSISNSISTSSSNRDNPFDDPNYLNLSL
SSTLGGMSANSSTSSSSSSISSSIPTHGRMSMNGRLSFIVGKEGAREGRR
LSIGGREGDLTTQVNGLKTLLHKKNLELEKLKGKVEEGREEGKEAQRLAQ
ALTAVVEKMEAEKERAGREREEMMRELAGMKDGWEEAEGRARKKEEEATV
LMGKMAEIEEQLLQTQARIKMASLSISDSSSEKKQQQQQQQQQQLQQQLQ
QQEQLQKEREAEHARLLAISHAHCQEVEARSKKQESTILSLEADLRSLHL
KLAQNHHEEGDRHKQKNTDLAKQQAAAATASRKAGELEAQVVSLNDMVEL
LTMDKEQLLIDQEVAEERMEGMSLEIETLKLELEHALEEAAAAAATATAA
IRGAGPQGGGEEGEREDVTGQNQRLRAALKRLQEVNVQERQEGSRRERQL
EKELAARECWERQAQDLLAWKKRKEAELESLHEQVEAGQAFAMMVEKLTE
QNLGLEEKVSDLRLAVSELEVAQEMSEELEEGQAEEARQLRGECGRLMVL
LAEKEEGLRQAEGRAGERERLLRRLKGVLGDLTRERDVLRDEVEERRMAL
GLAKERVEGVMEKVQGMRGQALLVRQKTMQAATATIEAWGARAHLERVLA
MVPHEVWKECQGGGEGGGVEEGKALEGDLRVARVGAKVGVALEAMKEGGF
AGLSILSSTSASTSLSASAAFPSLTALQRQGGETCQDRGNRAGHEGRLAL
TLSHIRHLAHFTLLHTQQQQQLQQKQSEEASLASSTAAPAVPAATAATAA
AARSAAAGIAFAPIERLLDELLLVLQEEGGVPESQFPLPPLLQALAHAEN
VLLPEGLNEGEGLGRLWEEVGAGGLVQLAPFLAVCLLIQAMMVEEEGKGG
REEEVGEQGEAARMKMKEMVQGLEKEGGRCIVKGESMRELLLSISSTSGS
SSSSSSSSISGVVARLTEDFASSSAAFTKLLLTNSTKQQQQQQQQQQAFG
LSVQGVMEGWLSSLASIPTSSIHALGSSECLFTALGEEVKEGGKENELLI
CSTAHGVRAAWLRERLKEGMRMGPLVLQLQKIEKGLRQELRGREREEEAL
RAQVETLEEMMRKAREREKEREGLKEELERLEKERRRIGEENEVLSEALE
VVQQQADALEGENRKLVALRGLSAVAPAGGGGGEAPSSSLRQKETTTETW
SSNSGAGAGAGAGAADPSLVAVAALATMERAMRHAGRETNYWRAQATRQG
LLQGLKPLVPLSMNCWGCSSSRSSNWRSSSSMNKETGSSSDNKKSSKSNN
NINSSSSSSSSSNEKKTRDFFAAFLSGQPPSPERTGRDIVEEVEGDEEPG
REGGREELRRTLEDLRRLAGKVQNARSNPRVVSLVGGERREGGRGGGGER
RLAHDRLLAQRVDAAMLVSEHRRLRSRVEELLGRQRAAAAATASTDGIAG
RSVIKKAPILLSVGEGEGGREGGREGRKTGGVLVGRVRIPPYRGEEAREE
DKKTQRIPVRVKDYHLHFLASRFLPLQ*
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Synonyms
Publications