NO15G00630, NO15G00630 (gene) Nannochloropsis oceanica
|
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO15G00630 vs. NCBI_GenBank
Match: XP_021964495.1 (dynactin subunit 1-like isoform X1 [Folsomia candida] >OXA63542.1 Dynactin subunit 1 [Folsomia candida]) HSP 1 Score: 96.7 bits (239), Expect = 8.500e-16 Identity = 47/70 (67.14%), Postives = 52/70 (74.29%), Query Frame = 0
Query: 87 VGDRV-LTAKDGQAGTVQFVGQTEFASGKWVGIALDYGSGKNDGAVGGRRYFDCAPAHGIFVREAQISLV 156
VG RV + +DG GTV FVG T FASGKWVG+ALD GKNDG+V G YFDC P HGIFVR AQI+LV
Sbjct: 6 VGSRVEIVGRDGAQGTVAFVGSTTFASGKWVGVALDEAKGKNDGSVNGTAYFDCPPNHGIFVRMAQITLV 75
BLAST of NO15G00630 vs. NCBI_GenBank
Match: XP_021964502.1 (dynactin subunit 1-like isoform X2 [Folsomia candida]) HSP 1 Score: 96.7 bits (239), Expect = 8.500e-16 Identity = 47/70 (67.14%), Postives = 52/70 (74.29%), Query Frame = 0
Query: 87 VGDRV-LTAKDGQAGTVQFVGQTEFASGKWVGIALDYGSGKNDGAVGGRRYFDCAPAHGIFVREAQISLV 156
VG RV + +DG GTV FVG T FASGKWVG+ALD GKNDG+V G YFDC P HGIFVR AQI+LV
Sbjct: 6 VGSRVEIVGRDGAQGTVAFVGSTTFASGKWVGVALDEAKGKNDGSVNGTAYFDCPPNHGIFVRMAQITLV 75
BLAST of NO15G00630 vs. NCBI_GenBank
Match: XP_011711940.1 (dynactin subunit 1 isoform X1 [Macaca nemestrina]) HSP 1 Score: 92.8 bits (229), Expect = 1.200e-14 Identity = 53/122 (43.44%), Postives = 69/122 (56.56%), Query Frame = 0
Query: 33 PQLAHRYDPSSPFVARRTSAFGVGDALLSAPPVSTMSTRARKRLQPDQQQHSYKVGDRVLTAKDGQAGTVQFVGQTEFASGKWVGIALDYGSGKNDGAVGGRRYFDCAPAHGIFVREAQISL 155
P A R P+ + RR+S VG L + P T+ T + R+ + +VG RV G GTV +VG T FA+GKWVG+ LD GKNDG V GR+YF C HGIFVR++QI +
Sbjct: 135 PTRAGRTGPAPQGLGRRSS---VGPELGAEP--LTVQTPSGSRMSAEASARPLRVGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDEGHGIFVRQSQIQV 251
BLAST of NO15G00630 vs. NCBI_GenBank
Match: XP_011711941.1 (dynactin subunit 1 isoform X2 [Macaca nemestrina]) HSP 1 Score: 92.8 bits (229), Expect = 1.200e-14 Identity = 53/122 (43.44%), Postives = 69/122 (56.56%), Query Frame = 0
Query: 33 PQLAHRYDPSSPFVARRTSAFGVGDALLSAPPVSTMSTRARKRLQPDQQQHSYKVGDRVLTAKDGQAGTVQFVGQTEFASGKWVGIALDYGSGKNDGAVGGRRYFDCAPAHGIFVREAQISL 155
P A R P+ + RR+S VG L + P T+ T + R+ + +VG RV G GTV +VG T FA+GKWVG+ LD GKNDG V GR+YF C HGIFVR++QI +
Sbjct: 135 PTRAGRTGPAPQGLGRRSS---VGPELGAEP--LTVQTPSGSRMSAEASARPLRVGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDEGHGIFVRQSQIQV 251
BLAST of NO15G00630 vs. NCBI_GenBank
Match: XP_011711943.1 (dynactin subunit 1 isoform X4 [Macaca nemestrina]) HSP 1 Score: 92.8 bits (229), Expect = 1.200e-14 Identity = 53/122 (43.44%), Postives = 69/122 (56.56%), Query Frame = 0
Query: 33 PQLAHRYDPSSPFVARRTSAFGVGDALLSAPPVSTMSTRARKRLQPDQQQHSYKVGDRVLTAKDGQAGTVQFVGQTEFASGKWVGIALDYGSGKNDGAVGGRRYFDCAPAHGIFVREAQISL 155
P A R P+ + RR+S VG L + P T+ T + R+ + +VG RV G GTV +VG T FA+GKWVG+ LD GKNDG V GR+YF C HGIFVR++QI +
Sbjct: 135 PTRAGRTGPAPQGLGRRSS---VGPELGAEP--LTVQTPSGSRMSAEASARPLRVGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDEGHGIFVRQSQIQV 251
BLAST of NO15G00630 vs. NCBI_GenBank
Match: XP_011711942.1 (dynactin subunit 1 isoform X3 [Macaca nemestrina]) HSP 1 Score: 92.8 bits (229), Expect = 1.200e-14 Identity = 53/122 (43.44%), Postives = 69/122 (56.56%), Query Frame = 0
Query: 33 PQLAHRYDPSSPFVARRTSAFGVGDALLSAPPVSTMSTRARKRLQPDQQQHSYKVGDRVLTAKDGQAGTVQFVGQTEFASGKWVGIALDYGSGKNDGAVGGRRYFDCAPAHGIFVREAQISL 155
P A R P+ + RR+S VG L + P T+ T + R+ + +VG RV G GTV +VG T FA+GKWVG+ LD GKNDG V GR+YF C HGIFVR++QI +
Sbjct: 135 PTRAGRTGPAPQGLGRRSS---VGPELGAEP--LTVQTPSGSRMSAEASARPLRVGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDEGHGIFVRQSQIQV 251
BLAST of NO15G00630 vs. NCBI_GenBank
Match: XP_011711944.1 (dynactin subunit 1 isoform X5 [Macaca nemestrina]) HSP 1 Score: 92.8 bits (229), Expect = 1.200e-14 Identity = 53/122 (43.44%), Postives = 69/122 (56.56%), Query Frame = 0
Query: 33 PQLAHRYDPSSPFVARRTSAFGVGDALLSAPPVSTMSTRARKRLQPDQQQHSYKVGDRVLTAKDGQAGTVQFVGQTEFASGKWVGIALDYGSGKNDGAVGGRRYFDCAPAHGIFVREAQISL 155
P A R P+ + RR+S VG L + P T+ T + R+ + +VG RV G GTV +VG T FA+GKWVG+ LD GKNDG V GR+YF C HGIFVR++QI +
Sbjct: 135 PTRAGRTGPAPQGLGRRSS---VGPELGAEP--LTVQTPSGSRMSAEASARPLRVGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDEGHGIFVRQSQIQV 251
BLAST of NO15G00630 vs. NCBI_GenBank
Match: XP_011711945.1 (dynactin subunit 1 isoform X6 [Macaca nemestrina]) HSP 1 Score: 92.8 bits (229), Expect = 1.200e-14 Identity = 53/122 (43.44%), Postives = 69/122 (56.56%), Query Frame = 0
Query: 33 PQLAHRYDPSSPFVARRTSAFGVGDALLSAPPVSTMSTRARKRLQPDQQQHSYKVGDRVLTAKDGQAGTVQFVGQTEFASGKWVGIALDYGSGKNDGAVGGRRYFDCAPAHGIFVREAQISL 155
P A R P+ + RR+S VG L + P T+ T + R+ + +VG RV G GTV +VG T FA+GKWVG+ LD GKNDG V GR+YF C HGIFVR++QI +
Sbjct: 135 PTRAGRTGPAPQGLGRRSS---VGPELGAEP--LTVQTPSGSRMSAEASARPLRVGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDEGHGIFVRQSQIQV 251
BLAST of NO15G00630 vs. NCBI_GenBank
Match: XP_014968154.1 (PREDICTED: dynactin subunit 1 isoform X1 [Macaca mulatta]) HSP 1 Score: 92.8 bits (229), Expect = 1.200e-14 Identity = 53/122 (43.44%), Postives = 69/122 (56.56%), Query Frame = 0
Query: 33 PQLAHRYDPSSPFVARRTSAFGVGDALLSAPPVSTMSTRARKRLQPDQQQHSYKVGDRVLTAKDGQAGTVQFVGQTEFASGKWVGIALDYGSGKNDGAVGGRRYFDCAPAHGIFVREAQISL 155
P A R P+ + RR+S VG L + P T+ T + R+ + +VG RV G GTV +VG T FA+GKWVG+ LD GKNDG V GR+YF C HGIFVR++QI +
Sbjct: 135 PTRAGRTGPAPQGLGRRSS---VGPELGAEP--LTVQTPSGSRMSAEASARPLRVGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDEGHGIFVRQSQIQV 251
BLAST of NO15G00630 vs. NCBI_GenBank
Match: XP_014968155.1 (PREDICTED: dynactin subunit 1 isoform X2 [Macaca mulatta]) HSP 1 Score: 92.8 bits (229), Expect = 1.200e-14 Identity = 53/122 (43.44%), Postives = 69/122 (56.56%), Query Frame = 0
Query: 33 PQLAHRYDPSSPFVARRTSAFGVGDALLSAPPVSTMSTRARKRLQPDQQQHSYKVGDRVLTAKDGQAGTVQFVGQTEFASGKWVGIALDYGSGKNDGAVGGRRYFDCAPAHGIFVREAQISL 155
P A R P+ + RR+S VG L + P T+ T + R+ + +VG RV G GTV +VG T FA+GKWVG+ LD GKNDG V GR+YF C HGIFVR++QI +
Sbjct: 135 PTRAGRTGPAPQGLGRRSS---VGPELGAEP--LTVQTPSGSRMSAEASARPLRVGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDEGHGIFVRQSQIQV 251 The following BLAST results are available for this feature:
BLAST of NO15G00630 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO15G00630 ID=NO15G00630|Name=NO15G00630|organism=Nannochloropsis oceanica|type=gene|length=5962bpback to top protein sequence of NO15G00630.1 >NO15G00630.1-protein ID=NO15G00630.1-protein|Name=NO15G00630.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1929bpback to top Synonyms
Publications
|