jgi.p|Nanoce1779_2|437487, mRNA_4613 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|437487
Unique Name	mRNA_4613
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	5910
Alignment location	scaffold_9:192568..198477 +

Link to JBrowse

Properties


Property Name	Value
TranscriptId	437573
Track	FilteredModels2
ProteinId	437487

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_9	supercontig	scaffold_9:192568..198477 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|437487	gene_4613	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|437487	mRNA_4613-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_4613	CDS_4613	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_9:192568..198477+
coding sequence from alignment at scaffold_9:192568..198477+

mRNA sequence

>mRNA_4613 ID=mRNA_4613|Name=jgi.p|Nanoce1779_2|437487|organism=Nannochloropsis oceanica|type=mRNA|length=5910bp
GCTGGAACATGGTACTGGTGTCAGATGCAGCCGCCTCTGGCTACCCGGAG
GAGCTGATTGGATGAAAAAATCGGGAAGCCACACACCAAATCAGTCACAC
AAATTACCACCCTCCAATACCTATGCCCTTACTCTGACACCCCTTCCTCC
TCATATCCCGCAGCTTGCACACAGATACGACCCAAGCTCGCCTTTTGTCG
CCCGCAGAACTTCAGCTTTCGGTGTCGGCGACGCCCTGCTTTCCGCCCCT
CCTGTGAGCACCATGTCCACGCGGGCCAGAAAGCGCCTCCAACCCGACCA
GCAACAACATAGCTACAAAGTAGGTGACCGCGTGCTTACCGCCAAGGATG
GTCAAGCGGGCACTGTACAGTTTGTGGGTCAGACGGAGTTCGCATCGGGC
AAGTGGGTAGGCATTGCCTTGGATTATGGTAGCGGTAAGAATGATGGTGC
CGTAGGCGGAAGGCGTTACTTTGACTGTGCGCCCGCCCATGGGATCTTCG
TCCGCGAGGCACAAATTTCTCTTGTCGTGACTGCGTCAAGGGGAGGCTCT
ATGTCCTCTGCTTCTGCGGCACATTGCTTTTCGTCGTCCTCAACGCGGGC
GGAGAAACCAGGGGAGGGAGATGCTGATGCCGATACTACTGCCGATGCTG
GGACGGCGGGCGCCCCGCGTGTCACTCGATCAAAGCTGGCAGATTTAAAG
GAGAAACGCAGTGCGGTGCTGCAGAAGGCAAGGGATATCAACAAACCCCT
CCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT
CCGTGTCTCCCACAAGCTCCTCTACAGCCGCTGCTTCTACTTTTCGTCGA
CAAATCCAGGCACCCAACGGCGGCTCTTTGAGGTCACATCACCCTTCATC
CTCGTCGTCCTCGTCGTTGTCCTCCTCCTCGTCGTCGTCCTCGTTCTCAA
AGGGCCGTCGGGCAAGTTTGACTGTGGGTGCTGGTGGCGGGGGGGAAGGA
GGAAGAGTGGGAGAGCATGGTGATCTCAATGCATCACTAACGGAAGCACA
AAGACAACTTCCTCCTTTCTCAGAGCCGATGGAGGAGGACGAGGAGGAGG
AGCAGGAATTATGTAAGAAATCAGCCACAGCAAAAGCACAAGCGGCATCC
TCCACCTCCTCCCCTTCCTCCTCAGCCTCCTCTTCAACCTCCTCCTCGTC
CTCGGCGGCAGCAATGGAGGAAAATACGTCACCTTTACCCACAACTTCCA
ACACCAACACTACCACCAACACCACCACCAACACCACCACCAACACCACC
ACCAATAGTATCAGCGACAGCATCAGCAACAGCATCAGCAACAGCATCAG
CACCAGCAGCAGCAACAGAGACAATCCATTTGACGACCCCAACTACCTTA
ACCTTTCTCTCAGCAGCACTCTAGGAGGCATGAGCGCCAACAGTAGCACC
AGCAGCAGCAGCAGCAGCATTAGTAGTAGCATCCCTACCCATGGACGGAT
GAGTATGAACGGCCGCTTGTCTTTTATTGTGGGAAAGGAGGGAGCCAGGG
AAGGAAGGAGGTTGAGCATAGGAGGGAGGGAAGGGGACCTCACTACTCAG
GTGAACGGCCTGAAGACTCTTCTTCATAAGAAAAATTTAGAGCTGGAAAA
ATTGAAGGGGAAGGTCGAGGAGGGGAGAGAGGAAGGGAAGGAGGCGCAGA
GGCTTGCGCAGGCATTGACGGCGGTAGTGGAGAAGATGGAGGCGGAGAAG
GAGAGAGCTGGGAGGGAACGGGAAGAAATGATGCGAGAGTTGGCAGGGAT
GAAGGATGGATGGGAGGAGGCGGAGGGACGGGCGAGGAAGAAGGAGGAGG
AGGCCACAGTACTGATGGGCAAGATGGCAGAAATAGAGGAGCAACTGCTG
CAAACGCAGGCTCGAATAAAGATGGCATCTTTATCAATTTCTGATTCCTC
CTCTGAAAAGAAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCTGCAGC
AGCAGCTCCAACAGCAGGAGCAGCTGCAAAAGGAACGGGAGGCAGAACAC
GCACGCTTGCTGGCCATCTCCCATGCCCACTGCCAAGAGGTAGAGGCCAG
AAGCAAGAAGCAGGAGTCCACCATCCTCTCTCTCGAGGCCGACCTTCGCT
CCCTTCACTTAAAGCTGGCCCAAAACCACCACGAAGAAGGGGATCGTCAC
AAGCAGAAGAACACGGACCTGGCCAAGCAACAAGCAGCGGCCGCAACCGC
ATCACGCAAAGCGGGGGAGTTGGAGGCCCAGGTGGTGAGTTTGAATGACA
TGGTAGAGTTGTTGACTATGGATAAAGAGCAACTGCTCATCGACCAGGAG
GTGGCGGAGGAACGGATGGAGGGAATGTCCCTTGAGATCGAGACGCTCAA
GCTAGAATTAGAGCACGCCCTGGAAGAGGCAGCAGCAGCAGCAGCAACAG
CAACAGCAGCAATAAGAGGAGCAGGTCCGCAAGGCGGAGGGGAGGAGGGA
GAGAGGGAGGATGTGACAGGGCAAAACCAACGGTTGAGGGCGGCGTTGAA
GCGGCTCCAGGAGGTGAATGTGCAGGAAAGGCAAGAGGGCAGTAGAAGGG
AGAGGCAGCTAGAGAAGGAGCTCGCGGCACGGGAATGCTGGGAACGGCAG
GCCCAAGATCTTCTAGCGTGGAAAAAGAGGAAAGAAGCGGAGCTGGAGTC
GTTGCACGAGCAGGTGGAAGCCGGGCAGGCTTTCGCGATGATGGTTGAGA
AATTGACGGAACAGAACCTGGGCTTGGAAGAAAAAGTGTCGGATCTGAGA
CTGGCCGTGAGTGAATTGGAGGTGGCGCAGGAAATGAGCGAGGAGCTGGA
GGAGGGACAGGCTGAGGAGGCGCGACAGCTGCGAGGAGAGTGTGGCCGAC
TGATGGTTCTGCTGGCTGAGAAGGAGGAGGGGTTGAGGCAGGCCGAGGGG
AGGGCGGGGGAGAGGGAGAGATTGTTGAGGAGGCTGAAGGGGGTTTTGGG
AGACCTCACTAGGGAGCGGGATGTGTTGAGGGATGAGGTAGAGGAGAGAC
GGATGGCACTTGGGCTAGCAAAAGAGCGGGTGGAGGGAGTGATGGAGAAA
GTGCAGGGAATGAGGGGACAGGCGTTGCTGGTAAGACAGAAGACCATGCA
AGCAGCAACAGCCACGATAGAGGCTTGGGGTGCACGAGCACATTTAGAAA
GGGTCTTGGCGATGGTACCACATGAGGTGTGGAAGGAGTGCCAGGGAGGA
GGGGAGGGAGGGGGGGTGGAGGAGGGGAAGGCTTTGGAAGGGGACCTGCG
TGTGGCTCGAGTAGGGGCGAAAGTGGGGGTGGCCCTAGAGGCGATGAAGG
AGGGTGGCTTCGCTGGTCTCTCCATCCTTTCCTCCACGTCCGCATCCACG
TCTTTGTCTGCTTCTGCTGCATTTCCTTCGTTGACAGCGTTGCAACGACA
GGGAGGAGAAACTTGTCAAGACAGGGGAAATCGAGCAGGCCACGAAGGTC
GCCTCGCTCTCACCCTTTCCCATATCCGGCATCTGGCCCACTTCACCCTC
CTCCACACTCAACAGCAGCAACAGCTGCAGCAAAAACAAAGCGAAGAGGC
TTCTCTTGCTTCCTCTACTGCTGCTCCAGCTGTTCCAGCTGCTACAGCTG
CTACTGCAGCTGCCGCAAGAAGTGCGGCGGCAGGGATCGCTTTTGCACCC
ATCGAACGTCTGCTGGACGAGCTTCTGCTGGTGCTGCAGGAAGAGGGCGG
GGTGCCTGAATCGCAATTTCCCCTCCCCCCCCTCCTCCAAGCCCTGGCCC
ATGCGGAAAATGTTTTACTCCCTGAGGGACTGAATGAAGGAGAGGGGTTG
GGGAGACTATGGGAGGAGGTAGGGGCAGGGGGGCTGGTTCAGTTGGCGCC
ATTTTTGGCGGTGTGTTTGTTGATACAGGCGATGATGGTGGAGGAGGAGG
GTAAGGGAGGGAGGGAGGAGGAGGTGGGGGAGCAAGGGGAGGCGGCAAGG
ATGAAGATGAAGGAGATGGTGCAGGGGTTGGAGAAGGAGGGGGGTCGGTG
TATAGTGAAGGGGGAAAGCATGCGGGAGCTGCTGTTGTCGATCAGTAGTA
CTAGTGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCATCAGTGGTGTTGTC
GCACGGCTTACAGAAGACTTTGCCTCGAGCAGCGCGGCCTTCACGAAACT
GCTCCTCACGAACAGCACCAAGCAGCAGCAGCAACAGCAGCAACAACAAC
AGGCGTTTGGATTGTCGGTCCAGGGGGTGATGGAGGGATGGTTGTCTTCT
CTGGCCTCCATCCCTACGTCCAGCATTCACGCTCTGGGCTCGTCAGAGTG
TCTTTTCACTGCCCTTGGTGAGGAAGTGAAGGAAGGAGGGAAGGAGAACG
AGCTGCTGATTTGTAGCACGGCCCATGGGGTGCGGGCGGCGTGGTTGAGG
GAGCGATTGAAGGAGGGAATGAGGATGGGGCCTTTGGTTCTGCAGCTGCA
GAAGATCGAAAAAGGGTTGAGGCAGGAATTGAGGGGAAGGGAGAGGGAGG
AGGAGGCCCTGAGAGCCCAGGTTGAAACGTTGGAGGAAATGATGAGGAAG
GCCCGGGAGAGGGAGAAGGAGAGGGAGGGGTTGAAGGAGGAGCTGGAGAG
GCTGGAGAAGGAGAGGCGGAGGATTGGCGAGGAGAATGAGGTGTTGTCCG
AGGCCTTGGAAGTAGTGCAGCAGCAGGCGGATGCCCTGGAGGGAGAAAAT
AGGAAATTGGTAGCTTTGAGAGGGCTATCTGCTGTAGCTCCAGCTGGTGG
TGGTGGTGGTGAAGCGCCCTCCTCTTCACTTCGGCAGAAGGAGACGACTA
CTGAGACATGGAGCAGCAACAGCGGAGCAGGAGCAGGAGCAGGAGCAGGA
GCAGCAGACCCTTCTCTCGTCGCTGTTGCTGCCCTTGCCACCATGGAGCG
TGCGATGCGGCACGCGGGGAGAGAGACGAATTATTGGCGTGCACAGGCAA
CACGGCAAGGCCTGCTGCAGGGACTGAAGCCGCTGGTGCCTCTGTCGATG
AACTGCTGGGGCTGTAGCAGCAGCAGGAGCAGCAACTGGAGGAGCAGCAG
CAGCATGAACAAGGAGACTGGCAGTAGCAGTGACAACAAGAAGAGCAGCA
AGAGCAACAACAACATTAACAGCAGCAGCAGCAGCAGCAGCAGCAGTAAT
GAGAAAAAGACGAGGGACTTTTTTGCTGCCTTCCTATCGGGCCAGCCTCC
CTCTCCCGAAAGGACAGGAAGAGACATAGTGGAGGAGGTAGAAGGGGACG
AGGAGCCAGGAAGGGAGGGAGGGAGGGAGGAATTGAGGAGGACGTTGGAG
GACCTGCGTCGACTGGCGGGAAAGGTCCAGAATGCGAGGAGTAATCCTCG
TGTGGTAAGTCTGGTAGGAGGGGAAAGGAGGGAAGGAGGGAGGGGAGGAG
GAGGCGAAAGAAGGCTTGCGCATGACAGGCTGTTGGCGCAACGAGTGGAT
GCAGCGATGTTGGTGTCGGAGCATCGTCGTCTGCGTTCGAGGGTAGAAGA
ACTTCTAGGAAGGCAAAGGGCGGCTGCTGCTGCTACGGCTTCTACCGATG
GTATTGCCGGTCGGTCTGTCATCAAAAAGGCGCCGATTTTGTTGTCAGTG
GGAGAGGGGGAAGGAGGAAGGGAAGGAGGAAGGGAGGGGAGGAAGACGGG
AGGGGTGTTGGTGGGGAGGGTGCGGATCCCTCCTTACAGAGGTGAGGAAG
CACGGGAGGAAGACAAGAAGACGCAACGCATTCCGGTGAGAGTTAAGGAT
TATCATTTGCATTTTTTGGCATCGCGGTTTTTGCCCTTGCAGTAAAAGAG
GAAAGTAGGGCGGGAAGGGCGGGAGGAAGGAGGAGACATGTAAACATGAC
TAAAGTAGTG

protein sequence of jgi.p|Nanoce1779_2|437487

>mRNA_4613-protein ID=mRNA_4613-protein|Name=jgi.p|Nanoce1779_2|437487|organism=Nannochloropsis oceanica|type=polypeptide|length=1928bp
MKKSGSHTPNQSHKLPPSNTYALTLTPLPPHIPQLAHRYDPSSPFVARRT
SAFGVGDALLSAPPVSTMSTRARKRLQPDQQQHSYKVGDRVLTAKDGQAG
TVQFVGQTEFASGKWVGIALDYGSGKNDGAVGGRRYFDCAPAHGIFVREA
QISLVVTASRGGSMSSASAAHCFSSSSTRAEKPGEGDADADTTADAGTAG
APRVTRSKLADLKEKRSAVLQKARDINKPLPSSSSSSSSSSSSSSSSVSP
TSSSTAAASTFRRQIQAPNGGSLRSHHPSSSSSSSLSSSSSSSSFSKGRR
ASLTVGAGGGGEGGRVGEHGDLNASLTEAQRQLPPFSEPMEEDEEEEQEL
CKKSATAKAQAASSTSSPSSSASSSTSSSSSAAAMEENTSPLPTTSNTNT
TTNTTTNTTTNTTTNSISDSISNSISNSISTSSSNRDNPFDDPNYLNLSL
SSTLGGMSANSSTSSSSSSISSSIPTHGRMSMNGRLSFIVGKEGAREGRR
LSIGGREGDLTTQVNGLKTLLHKKNLELEKLKGKVEEGREEGKEAQRLAQ
ALTAVVEKMEAEKERAGREREEMMRELAGMKDGWEEAEGRARKKEEEATV
LMGKMAEIEEQLLQTQARIKMASLSISDSSSEKKQQQQQQQQQQLQQQLQ
QQEQLQKEREAEHARLLAISHAHCQEVEARSKKQESTILSLEADLRSLHL
KLAQNHHEEGDRHKQKNTDLAKQQAAAATASRKAGELEAQVVSLNDMVEL
LTMDKEQLLIDQEVAEERMEGMSLEIETLKLELEHALEEAAAAAATATAA
IRGAGPQGGGEEGEREDVTGQNQRLRAALKRLQEVNVQERQEGSRRERQL
EKELAARECWERQAQDLLAWKKRKEAELESLHEQVEAGQAFAMMVEKLTE
QNLGLEEKVSDLRLAVSELEVAQEMSEELEEGQAEEARQLRGECGRLMVL
LAEKEEGLRQAEGRAGERERLLRRLKGVLGDLTRERDVLRDEVEERRMAL
GLAKERVEGVMEKVQGMRGQALLVRQKTMQAATATIEAWGARAHLERVLA
MVPHEVWKECQGGGEGGGVEEGKALEGDLRVARVGAKVGVALEAMKEGGF
AGLSILSSTSASTSLSASAAFPSLTALQRQGGETCQDRGNRAGHEGRLAL
TLSHIRHLAHFTLLHTQQQQQLQQKQSEEASLASSTAAPAVPAATAATAA
AARSAAAGIAFAPIERLLDELLLVLQEEGGVPESQFPLPPLLQALAHAEN
VLLPEGLNEGEGLGRLWEEVGAGGLVQLAPFLAVCLLIQAMMVEEEGKGG
REEEVGEQGEAARMKMKEMVQGLEKEGGRCIVKGESMRELLLSISSTSGS
SSSSSSSSISGVVARLTEDFASSSAAFTKLLLTNSTKQQQQQQQQQQAFG
LSVQGVMEGWLSSLASIPTSSIHALGSSECLFTALGEEVKEGGKENELLI
CSTAHGVRAAWLRERLKEGMRMGPLVLQLQKIEKGLRQELRGREREEEAL
RAQVETLEEMMRKAREREKEREGLKEELERLEKERRRIGEENEVLSEALE
VVQQQADALEGENRKLVALRGLSAVAPAGGGGGEAPSSSLRQKETTTETW
SSNSGAGAGAGAGAADPSLVAVAALATMERAMRHAGRETNYWRAQATRQG
LLQGLKPLVPLSMNCWGCSSSRSSNWRSSSSMNKETGSSSDNKKSSKSNN
NINSSSSSSSSSNEKKTRDFFAAFLSGQPPSPERTGRDIVEEVEGDEEPG
REGGREELRRTLEDLRRLAGKVQNARSNPRVVSLVGGERREGGRGGGGER
RLAHDRLLAQRVDAAMLVSEHRRLRSRVEELLGRQRAAAAATASTDGIAG
RSVIKKAPILLSVGEGEGGREGGREGRKTGGVLVGRVRIPPYRGEEAREE
DKKTQRIPVRVKDYHLHFLASRFLPLQ*

mRNA from alignment at scaffold_9:192568..198477+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_4613 ID=mRNA_4613|Name=jgi.p|Nanoce1779_2|437487|organism=Nannochloropsis oceanica|type=mRNA|length=5910bp|location=Sequence derived from alignment at scaffold_9:192568..198477+ (Nannochloropsis oceanica)
GCTGGAACATGGTACTGGTGTCAGATGCAGCCGCCTCTGGCTACCCGGAG
GAGCTGATTGGATGAAAAAATCGGGAAGCCACACACCAAATCAGTCACAC
AAATTACCACCCTCCAATACCTATGCCCTTACTCTGACACCCCTTCCTCC
TCATATCCCGCAGCTTGCACACAGATACGACCCAAGCTCGCCTTTTGTCG
CCCGCAGAACTTCAGCTTTCGGTGTCGGCGACGCCCTGCTTTCCGCCCCT
CCTGTGAGCACCATGTCCACGCGGGCCAGAAAGCGCCTCCAACCCGACCA
GCAACAACATAGCTACAAAGTAGGTGACCGCGTGCTTACCGCCAAGGATG
GTCAAGCGGGCACTGTACAGTTTGTGGGTCAGACGGAGTTCGCATCGGGC
AAGTGGGTAGGCATTGCCTTGGATTATGGTAGCGGTAAGAATGATGGTGC
CGTAGGCGGAAGGCGTTACTTTGACTGTGCGCCCGCCCATGGGATCTTCG
TCCGCGAGGCACAAATTTCTCTTGTCGTGACTGCGTCAAGGGGAGGCTCT
ATGTCCTCTGCTTCTGCGGCACATTGCTTTTCGTCGTCCTCAACGCGGGC
GGAGAAACCAGGGGAGGGAGATGCTGATGCCGATACTACTGCCGATGCTG
GGACGGCGGGCGCCCCGCGTGTCACTCGATCAAAGCTGGCAGATTTAAAG
GAGAAACGCAGTGCGGTGCTGCAGAAGGCAAGGGATATCAACAAACCCCT
CCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT
CCGTGTCTCCCACAAGCTCCTCTACAGCCGCTGCTTCTACTTTTCGTCGA
CAAATCCAGGCACCCAACGGCGGCTCTTTGAGGTCACATCACCCTTCATC
CTCGTCGTCCTCGTCGTTGTCCTCCTCCTCGTCGTCGTCCTCGTTCTCAA
AGGGCCGTCGGGCAAGTTTGACTGTGGGTGCTGGTGGCGGGGGGGAAGGA
GGAAGAGTGGGAGAGCATGGTGATCTCAATGCATCACTAACGGAAGCACA
AAGACAACTTCCTCCTTTCTCAGAGCCGATGGAGGAGGACGAGGAGGAGG
AGCAGGAATTATGTAAGAAATCAGCCACAGCAAAAGCACAAGCGGCATCC
TCCACCTCCTCCCCTTCCTCCTCAGCCTCCTCTTCAACCTCCTCCTCGTC
CTCGGCGGCAGCAATGGAGGAAAATACGTCACCTTTACCCACAACTTCCA
ACACCAACACTACCACCAACACCACCACCAACACCACCACCAACACCACC
ACCAATAGTATCAGCGACAGCATCAGCAACAGCATCAGCAACAGCATCAG
CACCAGCAGCAGCAACAGAGACAATCCATTTGACGACCCCAACTACCTTA
ACCTTTCTCTCAGCAGCACTCTAGGAGGCATGAGCGCCAACAGTAGCACC
AGCAGCAGCAGCAGCAGCATTAGTAGTAGCATCCCTACCCATGGACGGAT
GAGTATGAACGGCCGCTTGTCTTTTATTGTGGGAAAGGAGGGAGCCAGGG
AAGGAAGGAGGTTGAGCATAGGAGGGAGGGAAGGGGACCTCACTACTCAG
GTGAACGGCCTGAAGACTCTTCTTCATAAGAAAAATTTAGAGCTGGAAAA
ATTGAAGGGGAAGGTCGAGGAGGGGAGAGAGGAAGGGAAGGAGGCGCAGA
GGCTTGCGCAGGCATTGACGGCGGTAGTGGAGAAGATGGAGGCGGAGAAG
GAGAGAGCTGGGAGGGAACGGGAAGAAATGATGCGAGAGTTGGCAGGGAT
GAAGGATGGATGGGAGGAGGCGGAGGGACGGGCGAGGAAGAAGGAGGAGG
AGGCCACAGTACTGATGGGCAAGATGGCAGAAATAGAGGAGCAACTGCTG
CAAACGCAGGCTCGAATAAAGATGGCATCTTTATCAATTTCTGATTCCTC
CTCTGAAAAGAAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCTGCAGC
AGCAGCTCCAACAGCAGGAGCAGCTGCAAAAGGAACGGGAGGCAGAACAC
GCACGCTTGCTGGCCATCTCCCATGCCCACTGCCAAGAGGTAGAGGCCAG
AAGCAAGAAGCAGGAGTCCACCATCCTCTCTCTCGAGGCCGACCTTCGCT
CCCTTCACTTAAAGCTGGCCCAAAACCACCACGAAGAAGGGGATCGTCAC
AAGCAGAAGAACACGGACCTGGCCAAGCAACAAGCAGCGGCCGCAACCGC
ATCACGCAAAGCGGGGGAGTTGGAGGCCCAGGTGGTGAGTTTGAATGACA
TGGTAGAGTTGTTGACTATGGATAAAGAGCAACTGCTCATCGACCAGGAG
GTGGCGGAGGAACGGATGGAGGGAATGTCCCTTGAGATCGAGACGCTCAA
GCTAGAATTAGAGCACGCCCTGGAAGAGGCAGCAGCAGCAGCAGCAACAG
CAACAGCAGCAATAAGAGGAGCAGGTCCGCAAGGCGGAGGGGAGGAGGGA
GAGAGGGAGGATGTGACAGGGCAAAACCAACGGTTGAGGGCGGCGTTGAA
GCGGCTCCAGGAGGTGAATGTGCAGGAAAGGCAAGAGGGCAGTAGAAGGG
AGAGGCAGCTAGAGAAGGAGCTCGCGGCACGGGAATGCTGGGAACGGCAG
GCCCAAGATCTTCTAGCGTGGAAAAAGAGGAAAGAAGCGGAGCTGGAGTC
GTTGCACGAGCAGGTGGAAGCCGGGCAGGCTTTCGCGATGATGGTTGAGA
AATTGACGGAACAGAACCTGGGCTTGGAAGAAAAAGTGTCGGATCTGAGA
CTGGCCGTGAGTGAATTGGAGGTGGCGCAGGAAATGAGCGAGGAGCTGGA
GGAGGGACAGGCTGAGGAGGCGCGACAGCTGCGAGGAGAGTGTGGCCGAC
TGATGGTTCTGCTGGCTGAGAAGGAGGAGGGGTTGAGGCAGGCCGAGGGG
AGGGCGGGGGAGAGGGAGAGATTGTTGAGGAGGCTGAAGGGGGTTTTGGG
AGACCTCACTAGGGAGCGGGATGTGTTGAGGGATGAGGTAGAGGAGAGAC
GGATGGCACTTGGGCTAGCAAAAGAGCGGGTGGAGGGAGTGATGGAGAAA
GTGCAGGGAATGAGGGGACAGGCGTTGCTGGTAAGACAGAAGACCATGCA
AGCAGCAACAGCCACGATAGAGGCTTGGGGTGCACGAGCACATTTAGAAA
GGGTCTTGGCGATGGTACCACATGAGGTGTGGAAGGAGTGCCAGGGAGGA
GGGGAGGGAGGGGGGGTGGAGGAGGGGAAGGCTTTGGAAGGGGACCTGCG
TGTGGCTCGAGTAGGGGCGAAAGTGGGGGTGGCCCTAGAGGCGATGAAGG
AGGGTGGCTTCGCTGGTCTCTCCATCCTTTCCTCCACGTCCGCATCCACG
TCTTTGTCTGCTTCTGCTGCATTTCCTTCGTTGACAGCGTTGCAACGACA
GGGAGGAGAAACTTGTCAAGACAGGGGAAATCGAGCAGGCCACGAAGGTC
GCCTCGCTCTCACCCTTTCCCATATCCGGCATCTGGCCCACTTCACCCTC
CTCCACACTCAACAGCAGCAACAGCTGCAGCAAAAACAAAGCGAAGAGGC
TTCTCTTGCTTCCTCTACTGCTGCTCCAGCTGTTCCAGCTGCTACAGCTG
CTACTGCAGCTGCCGCAAGAAGTGCGGCGGCAGGGATCGCTTTTGCACCC
ATCGAACGTCTGCTGGACGAGCTTCTGCTGGTGCTGCAGGAAGAGGGCGG
GGTGCCTGAATCGCAATTTCCCCTCCCCCCCCTCCTCCAAGCCCTGGCCC
ATGCGGAAAATGTTTTACTCCCTGAGGGACTGAATGAAGGAGAGGGGTTG
GGGAGACTATGGGAGGAGGTAGGGGCAGGGGGGCTGGTTCAGTTGGCGCC
ATTTTTGGCGGTGTGTTTGTTGATACAGGCGATGATGGTGGAGGAGGAGG
GTAAGGGAGGGAGGGAGGAGGAGGTGGGGGAGCAAGGGGAGGCGGCAAGG
ATGAAGATGAAGGAGATGGTGCAGGGGTTGGAGAAGGAGGGGGGTCGGTG
TATAGTGAAGGGGGAAAGCATGCGGGAGCTGCTGTTGTCGATCAGTAGTA
CTAGTGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCATCAGTGGTGTTGTC
GCACGGCTTACAGAAGACTTTGCCTCGAGCAGCGCGGCCTTCACGAAACT
GCTCCTCACGAACAGCACCAAGCAGCAGCAGCAACAGCAGCAACAACAAC
AGGCGTTTGGATTGTCGGTCCAGGGGGTGATGGAGGGATGGTTGTCTTCT
CTGGCCTCCATCCCTACGTCCAGCATTCACGCTCTGGGCTCGTCAGAGTG
TCTTTTCACTGCCCTTGGTGAGGAAGTGAAGGAAGGAGGGAAGGAGAACG
AGCTGCTGATTTGTAGCACGGCCCATGGGGTGCGGGCGGCGTGGTTGAGG
GAGCGATTGAAGGAGGGAATGAGGATGGGGCCTTTGGTTCTGCAGCTGCA
GAAGATCGAAAAAGGGTTGAGGCAGGAATTGAGGGGAAGGGAGAGGGAGG
AGGAGGCCCTGAGAGCCCAGGTTGAAACGTTGGAGGAAATGATGAGGAAG
GCCCGGGAGAGGGAGAAGGAGAGGGAGGGGTTGAAGGAGGAGCTGGAGAG
GCTGGAGAAGGAGAGGCGGAGGATTGGCGAGGAGAATGAGGTGTTGTCCG
AGGCCTTGGAAGTAGTGCAGCAGCAGGCGGATGCCCTGGAGGGAGAAAAT
AGGAAATTGGTAGCTTTGAGAGGGCTATCTGCTGTAGCTCCAGCTGGTGG
TGGTGGTGGTGAAGCGCCCTCCTCTTCACTTCGGCAGAAGGAGACGACTA
CTGAGACATGGAGCAGCAACAGCGGAGCAGGAGCAGGAGCAGGAGCAGGA
GCAGCAGACCCTTCTCTCGTCGCTGTTGCTGCCCTTGCCACCATGGAGCG
TGCGATGCGGCACGCGGGGAGAGAGACGAATTATTGGCGTGCACAGGCAA
CACGGCAAGGCCTGCTGCAGGGACTGAAGCCGCTGGTGCCTCTGTCGATG
AACTGCTGGGGCTGTAGCAGCAGCAGGAGCAGCAACTGGAGGAGCAGCAG
CAGCATGAACAAGGAGACTGGCAGTAGCAGTGACAACAAGAAGAGCAGCA
AGAGCAACAACAACATTAACAGCAGCAGCAGCAGCAGCAGCAGCAGTAAT
GAGAAAAAGACGAGGGACTTTTTTGCTGCCTTCCTATCGGGCCAGCCTCC
CTCTCCCGAAAGGACAGGAAGAGACATAGTGGAGGAGGTAGAAGGGGACG
AGGAGCCAGGAAGGGAGGGAGGGAGGGAGGAATTGAGGAGGACGTTGGAG
GACCTGCGTCGACTGGCGGGAAAGGTCCAGAATGCGAGGAGTAATCCTCG
TGTGGTAAGTCTGGTAGGAGGGGAAAGGAGGGAAGGAGGGAGGGGAGGAG
GAGGCGAAAGAAGGCTTGCGCATGACAGGCTGTTGGCGCAACGAGTGGAT
GCAGCGATGTTGGTGTCGGAGCATCGTCGTCTGCGTTCGAGGGTAGAAGA
ACTTCTAGGAAGGCAAAGGGCGGCTGCTGCTGCTACGGCTTCTACCGATG
GTATTGCCGGTCGGTCTGTCATCAAAAAGGCGCCGATTTTGTTGTCAGTG
GGAGAGGGGGAAGGAGGAAGGGAAGGAGGAAGGGAGGGGAGGAAGACGGG
AGGGGTGTTGGTGGGGAGGGTGCGGATCCCTCCTTACAGAGGTGAGGAAG
CACGGGAGGAAGACAAGAAGACGCAACGCATTCCGGTGAGAGTTAAGGAT
TATCATTTGCATTTTTTGGCATCGCGGTTTTTGCCCTTGCAGTAAAAGAG
GAAAGTAGGGCGGGAAGGGCGGGAGGAAGGAGGAGACATGTAAACATGAC
TAAAGTAGTG

Coding sequence (CDS) from alignment at scaffold_9:192568..198477+

>mRNA_4613 ID=mRNA_4613|Name=jgi.p|Nanoce1779_2|437487|organism=Nannochloropsis oceanica|type=CDS|length=5784bp|location=Sequence derived from alignment at scaffold_9:192568..198477+ (Nannochloropsis oceanica)
ATGAAAAAATCGGGAAGCCACACACCAAATCAGTCACACAAATTACCACC
CTCCAATACCTATGCCCTTACTCTGACACCCCTTCCTCCTCATATCCCGC
AGCTTGCACACAGATACGACCCAAGCTCGCCTTTTGTCGCCCGCAGAACT
TCAGCTTTCGGTGTCGGCGACGCCCTGCTTTCCGCCCCTCCTGTGAGCAC
CATGTCCACGCGGGCCAGAAAGCGCCTCCAACCCGACCAGCAACAACATA
GCTACAAAGTAGGTGACCGCGTGCTTACCGCCAAGGATGGTCAAGCGGGC
ACTGTACAGTTTGTGGGTCAGACGGAGTTCGCATCGGGCAAGTGGGTAGG
CATTGCCTTGGATTATGGTAGCGGTAAGAATGATGGTGCCGTAGGCGGAA
GGCGTTACTTTGACTGTGCGCCCGCCCATGGGATCTTCGTCCGCGAGGCA
CAAATTTCTCTTGTCGTGACTGCGTCAAGGGGAGGCTCTATGTCCTCTGC
TTCTGCGGCACATTGCTTTTCGTCGTCCTCAACGCGGGCGGAGAAACCAG
GGGAGGGAGATGCTGATGCCGATACTACTGCCGATGCTGGGACGGCGGGC
GCCCCGCGTGTCACTCGATCAAAGCTGGCAGATTTAAAGGAGAAACGCAG
TGCGGTGCTGCAGAAGGCAAGGGATATCAACAAACCCCTCCCCTCCTCCT
CCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCGTGTCTCCC
ACAAGCTCCTCTACAGCCGCTGCTTCTACTTTTCGTCGACAAATCCAGGC
ACCCAACGGCGGCTCTTTGAGGTCACATCACCCTTCATCCTCGTCGTCCT
CGTCGTTGTCCTCCTCCTCGTCGTCGTCCTCGTTCTCAAAGGGCCGTCGG
GCAAGTTTGACTGTGGGTGCTGGTGGCGGGGGGGAAGGAGGAAGAGTGGG
AGAGCATGGTGATCTCAATGCATCACTAACGGAAGCACAAAGACAACTTC
CTCCTTTCTCAGAGCCGATGGAGGAGGACGAGGAGGAGGAGCAGGAATTA
TGTAAGAAATCAGCCACAGCAAAAGCACAAGCGGCATCCTCCACCTCCTC
CCCTTCCTCCTCAGCCTCCTCTTCAACCTCCTCCTCGTCCTCGGCGGCAG
CAATGGAGGAAAATACGTCACCTTTACCCACAACTTCCAACACCAACACT
ACCACCAACACCACCACCAACACCACCACCAACACCACCACCAATAGTAT
CAGCGACAGCATCAGCAACAGCATCAGCAACAGCATCAGCACCAGCAGCA
GCAACAGAGACAATCCATTTGACGACCCCAACTACCTTAACCTTTCTCTC
AGCAGCACTCTAGGAGGCATGAGCGCCAACAGTAGCACCAGCAGCAGCAG
CAGCAGCATTAGTAGTAGCATCCCTACCCATGGACGGATGAGTATGAACG
GCCGCTTGTCTTTTATTGTGGGAAAGGAGGGAGCCAGGGAAGGAAGGAGG
TTGAGCATAGGAGGGAGGGAAGGGGACCTCACTACTCAGGTGAACGGCCT
GAAGACTCTTCTTCATAAGAAAAATTTAGAGCTGGAAAAATTGAAGGGGA
AGGTCGAGGAGGGGAGAGAGGAAGGGAAGGAGGCGCAGAGGCTTGCGCAG
GCATTGACGGCGGTAGTGGAGAAGATGGAGGCGGAGAAGGAGAGAGCTGG
GAGGGAACGGGAAGAAATGATGCGAGAGTTGGCAGGGATGAAGGATGGAT
GGGAGGAGGCGGAGGGACGGGCGAGGAAGAAGGAGGAGGAGGCCACAGTA
CTGATGGGCAAGATGGCAGAAATAGAGGAGCAACTGCTGCAAACGCAGGC
TCGAATAAAGATGGCATCTTTATCAATTTCTGATTCCTCCTCTGAAAAGA
AGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCTGCAGCAGCAGCTCCAA
CAGCAGGAGCAGCTGCAAAAGGAACGGGAGGCAGAACACGCACGCTTGCT
GGCCATCTCCCATGCCCACTGCCAAGAGGTAGAGGCCAGAAGCAAGAAGC
AGGAGTCCACCATCCTCTCTCTCGAGGCCGACCTTCGCTCCCTTCACTTA
AAGCTGGCCCAAAACCACCACGAAGAAGGGGATCGTCACAAGCAGAAGAA
CACGGACCTGGCCAAGCAACAAGCAGCGGCCGCAACCGCATCACGCAAAG
CGGGGGAGTTGGAGGCCCAGGTGGTGAGTTTGAATGACATGGTAGAGTTG
TTGACTATGGATAAAGAGCAACTGCTCATCGACCAGGAGGTGGCGGAGGA
ACGGATGGAGGGAATGTCCCTTGAGATCGAGACGCTCAAGCTAGAATTAG
AGCACGCCCTGGAAGAGGCAGCAGCAGCAGCAGCAACAGCAACAGCAGCA
ATAAGAGGAGCAGGTCCGCAAGGCGGAGGGGAGGAGGGAGAGAGGGAGGA
TGTGACAGGGCAAAACCAACGGTTGAGGGCGGCGTTGAAGCGGCTCCAGG
AGGTGAATGTGCAGGAAAGGCAAGAGGGCAGTAGAAGGGAGAGGCAGCTA
GAGAAGGAGCTCGCGGCACGGGAATGCTGGGAACGGCAGGCCCAAGATCT
TCTAGCGTGGAAAAAGAGGAAAGAAGCGGAGCTGGAGTCGTTGCACGAGC
AGGTGGAAGCCGGGCAGGCTTTCGCGATGATGGTTGAGAAATTGACGGAA
CAGAACCTGGGCTTGGAAGAAAAAGTGTCGGATCTGAGACTGGCCGTGAG
TGAATTGGAGGTGGCGCAGGAAATGAGCGAGGAGCTGGAGGAGGGACAGG
CTGAGGAGGCGCGACAGCTGCGAGGAGAGTGTGGCCGACTGATGGTTCTG
CTGGCTGAGAAGGAGGAGGGGTTGAGGCAGGCCGAGGGGAGGGCGGGGGA
GAGGGAGAGATTGTTGAGGAGGCTGAAGGGGGTTTTGGGAGACCTCACTA
GGGAGCGGGATGTGTTGAGGGATGAGGTAGAGGAGAGACGGATGGCACTT
GGGCTAGCAAAAGAGCGGGTGGAGGGAGTGATGGAGAAAGTGCAGGGAAT
GAGGGGACAGGCGTTGCTGGTAAGACAGAAGACCATGCAAGCAGCAACAG
CCACGATAGAGGCTTGGGGTGCACGAGCACATTTAGAAAGGGTCTTGGCG
ATGGTACCACATGAGGTGTGGAAGGAGTGCCAGGGAGGAGGGGAGGGAGG
GGGGGTGGAGGAGGGGAAGGCTTTGGAAGGGGACCTGCGTGTGGCTCGAG
TAGGGGCGAAAGTGGGGGTGGCCCTAGAGGCGATGAAGGAGGGTGGCTTC
GCTGGTCTCTCCATCCTTTCCTCCACGTCCGCATCCACGTCTTTGTCTGC
TTCTGCTGCATTTCCTTCGTTGACAGCGTTGCAACGACAGGGAGGAGAAA
CTTGTCAAGACAGGGGAAATCGAGCAGGCCACGAAGGTCGCCTCGCTCTC
ACCCTTTCCCATATCCGGCATCTGGCCCACTTCACCCTCCTCCACACTCA
ACAGCAGCAACAGCTGCAGCAAAAACAAAGCGAAGAGGCTTCTCTTGCTT
CCTCTACTGCTGCTCCAGCTGTTCCAGCTGCTACAGCTGCTACTGCAGCT
GCCGCAAGAAGTGCGGCGGCAGGGATCGCTTTTGCACCCATCGAACGTCT
GCTGGACGAGCTTCTGCTGGTGCTGCAGGAAGAGGGCGGGGTGCCTGAAT
CGCAATTTCCCCTCCCCCCCCTCCTCCAAGCCCTGGCCCATGCGGAAAAT
GTTTTACTCCCTGAGGGACTGAATGAAGGAGAGGGGTTGGGGAGACTATG
GGAGGAGGTAGGGGCAGGGGGGCTGGTTCAGTTGGCGCCATTTTTGGCGG
TGTGTTTGTTGATACAGGCGATGATGGTGGAGGAGGAGGGTAAGGGAGGG
AGGGAGGAGGAGGTGGGGGAGCAAGGGGAGGCGGCAAGGATGAAGATGAA
GGAGATGGTGCAGGGGTTGGAGAAGGAGGGGGGTCGGTGTATAGTGAAGG
GGGAAAGCATGCGGGAGCTGCTGTTGTCGATCAGTAGTACTAGTGGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCATCAGTGGTGTTGTCGCACGGCTTAC
AGAAGACTTTGCCTCGAGCAGCGCGGCCTTCACGAAACTGCTCCTCACGA
ACAGCACCAAGCAGCAGCAGCAACAGCAGCAACAACAACAGGCGTTTGGA
TTGTCGGTCCAGGGGGTGATGGAGGGATGGTTGTCTTCTCTGGCCTCCAT
CCCTACGTCCAGCATTCACGCTCTGGGCTCGTCAGAGTGTCTTTTCACTG
CCCTTGGTGAGGAAGTGAAGGAAGGAGGGAAGGAGAACGAGCTGCTGATT
TGTAGCACGGCCCATGGGGTGCGGGCGGCGTGGTTGAGGGAGCGATTGAA
GGAGGGAATGAGGATGGGGCCTTTGGTTCTGCAGCTGCAGAAGATCGAAA
AAGGGTTGAGGCAGGAATTGAGGGGAAGGGAGAGGGAGGAGGAGGCCCTG
AGAGCCCAGGTTGAAACGTTGGAGGAAATGATGAGGAAGGCCCGGGAGAG
GGAGAAGGAGAGGGAGGGGTTGAAGGAGGAGCTGGAGAGGCTGGAGAAGG
AGAGGCGGAGGATTGGCGAGGAGAATGAGGTGTTGTCCGAGGCCTTGGAA
GTAGTGCAGCAGCAGGCGGATGCCCTGGAGGGAGAAAATAGGAAATTGGT
AGCTTTGAGAGGGCTATCTGCTGTAGCTCCAGCTGGTGGTGGTGGTGGTG
AAGCGCCCTCCTCTTCACTTCGGCAGAAGGAGACGACTACTGAGACATGG
AGCAGCAACAGCGGAGCAGGAGCAGGAGCAGGAGCAGGAGCAGCAGACCC
TTCTCTCGTCGCTGTTGCTGCCCTTGCCACCATGGAGCGTGCGATGCGGC
ACGCGGGGAGAGAGACGAATTATTGGCGTGCACAGGCAACACGGCAAGGC
CTGCTGCAGGGACTGAAGCCGCTGGTGCCTCTGTCGATGAACTGCTGGGG
CTGTAGCAGCAGCAGGAGCAGCAACTGGAGGAGCAGCAGCAGCATGAACA
AGGAGACTGGCAGTAGCAGTGACAACAAGAAGAGCAGCAAGAGCAACAAC
AACATTAACAGCAGCAGCAGCAGCAGCAGCAGCAGTAATGAGAAAAAGAC
GAGGGACTTTTTTGCTGCCTTCCTATCGGGCCAGCCTCCCTCTCCCGAAA
GGACAGGAAGAGACATAGTGGAGGAGGTAGAAGGGGACGAGGAGCCAGGA
AGGGAGGGAGGGAGGGAGGAATTGAGGAGGACGTTGGAGGACCTGCGTCG
ACTGGCGGGAAAGGTCCAGAATGCGAGGAGTAATCCTCGTGTGGTAAGTC
TGGTAGGAGGGGAAAGGAGGGAAGGAGGGAGGGGAGGAGGAGGCGAAAGA
AGGCTTGCGCATGACAGGCTGTTGGCGCAACGAGTGGATGCAGCGATGTT
GGTGTCGGAGCATCGTCGTCTGCGTTCGAGGGTAGAAGAACTTCTAGGAA
GGCAAAGGGCGGCTGCTGCTGCTACGGCTTCTACCGATGGTATTGCCGGT
CGGTCTGTCATCAAAAAGGCGCCGATTTTGTTGTCAGTGGGAGAGGGGGA
AGGAGGAAGGGAAGGAGGAAGGGAGGGGAGGAAGACGGGAGGGGTGTTGG
TGGGGAGGGTGCGGATCCCTCCTTACAGAGGTGAGGAAGCACGGGAGGAA
GACAAGAAGACGCAACGCATTCCGGTGAGAGTTAAGGATTATCATTTGCA
TTTTTTGGCATCGCGGTTTTTGCCCTTGCAGTAA

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