jgi.p|Nanoce1779_2|588596, gene_4279 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|588596
Unique Namegene_4279
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_10:182112..183531 +

Link to JBrowse

Properties
Property NameValue
TranscriptId588682
ProteinId588596
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_10supercontigscaffold_10:182112..183531 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL022ncniL022Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region
ncniL021ncniL021Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G02690NO09G02690Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|588596mRNA_4279-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|588596mRNA_4279Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|588596

>mRNA_4279-protein ID=mRNA_4279-protein|Name=jgi.p|Nanoce1779_2|588596|organism=Nannochloropsis oceanica|type=polypeptide|length=296bp
MHGGCPLRVLLGLPLVLCVLLSPTIFAFRRPLLSARPAASAFGWSSSKQR
AATTFSFGWKNKLSASSFTSSWPAAGGVGAGAVTAPPNQPPPTRAFAMAQ
LSKITGGATGAADTGSKQHFSLSTLWGVVGVVAVLSNAIRRLLPIALEPF
SKAGTAGATAFTPLHWAQYVGFALVMAYAEGYKGFQLKFSPLVVKRAMTL
GPNSPFHHKLFAAPYSMGLFHASKKRQIVSWTLALGIVGLVKLVKTLVFP
YRAIVDAGVVVGLSWGTASIAGIYIQALRGQVPGIDPAMPEKKVQ*
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Synonyms
Publications