NO09G02690, NO09G02690 (gene) Nannochloropsis oceanica

Overview
NameNO09G02690
Unique NameNO09G02690
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length888
Alignment locationchr9:797749..798636 -

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:797749..798636 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO09G02690 vs. NCBI_GenBank
Match: EWM27568.1 (hypothetical protein Naga_100015g35 [Nannochloropsis gaditana])

HSP 1 Score: 359.4 bits (921), Expect = 1.100e-95
Identity = 204/295 (69.15%), Postives = 225/295 (76.27%), Query Frame = 0
Query:    1 MHGGCPLRVLLGLPLVLCVLLSPTIFAF--RRPLLSARPAASAFGWSSSKQRAATTFSFXXKNKLSASSFTSSWPAAGGVGAGAVTAPPNQPPPTRAFAMAQLSKITGGATGAADTGSKQHFSLSTLWGVVGVVAVLSNAIRRLLPIALEPFSKAGTAGATAFTPLHWAQYVGFALVMAYAEGYKGFQLKFSPLVVKRAMTLGPNSPFHHKLFAAPYSMGLFHASKKRQIVSWTLALGIVGLVKLVKTLVFPYRAIVDAGVVVGLSWGTASIAGIYIQALRGQVPGIDPAMPEKK 294
            M GGCPLRVLL  PL+LC +LS  I +F  RRPL  ARP+ SAF WSS+K   AT +      KLSA S T  WP        A  A P+     R  +MA+L+KITGGA  A +T  KQ FSLS LWGVVGVVA+LSNAIRRLLPIALEPF K  TA  TAFTPLHWAQYVGFAL+MAYAEGYKGFQLKFSPLVVKRA+TLGP SP  HK+ AAPYSMGLFHASKKRQIVSWT+ALG++GLVK VKTL FPYR+IVDAGVV GLSWG  SIAGIY QALRG VP IDPA+P+ K
Sbjct:    1 MSGGCPLRVLL-RPLLLCAILSRRIVSFSTRRPLFCARPSTSAFDWSSNKHSIATIYP-STSYKLSALSST-PWPLP---EVEARAALPSTRRAARDVSMAKLAKITGGAAPAVETSQKQSFSLSALWGVVGVVAMLSNAIRRLLPIALEPFKK--TATPTAFTPLHWAQYVGFALIMAYAEGYKGFQLKFSPLVVKRALTLGPRSPLLHKVLAAPYSMGLFHASKKRQIVSWTIALGVIGLVKAVKTLAFPYRSIVDAGVVAGLSWGALSIAGIYAQALRGHVPSIDPALPDVK 287          
BLAST of NO09G02690 vs. NCBI_GenBank
Match: XP_002289331.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED92868.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 180.3 bits (456), Expect = 9.000e-42
Identity = 97/174 (55.75%), Postives = 120/174 (68.97%), Query Frame = 0
Query:  122 LSTLWGVVGVVAVLSNAIRRLLPIALEPFSKAGTAGATAFTPLHWAQYVGFALVMAYAEGYKGFQLKFSPLVVKRAMTLGPNSPFHHKLFAAPYSMGLFHASKKRQIVSWTLALGIVGLVKLVKTLVFPYRAIVDAGVVVGLSWGTASIAGIYIQAL-RGQVP-GIDPAMPEKK 294
            L++LWG  GV  +L  AI+R++PIALEPF   G    T F     A Y+   L  AY EGYKGFQ KFSPLVV R+ TL   SPFHH LFA  YSMGLFHA+KKR IVSW++++G+  +V  VK L +P+R IVDAGVV+GLSWGT SI G Y+ +L  G  P  +DP++PE K
Sbjct:  102 LASLWGTSGVAYILLKAIKRVVPIALEPFKGEGVVPLTQF---QLAAYIITCLWFAYVEGYKGFQRKFSPLVVSRSFTLQSTSPFHHLLFAPFYSMGLFHATKKRMIVSWSVSIGVAAIVAAVKRLPYPWRNIVDAGVVIGLSWGTISIIGGYVISLVTGIAPIDVDPSLPESK 272          
BLAST of NO09G02690 vs. NCBI_GenBank
Match: EJK76252.1 (hypothetical protein THAOC_01998 [Thalassiosira oceanica])

HSP 1 Score: 173.7 bits (439), Expect = 8.400e-40
Identity = 98/173 (56.65%), Postives = 115/173 (66.47%), Query Frame = 0
Query:  122 LSTLWGVVGVVAVLSNAIRRLLPIALEPFSKAGTAGATAFTPLHWAQYVGFALVMAYAEGYKGFQLKFSPLVVKRAMTLGP-NSPFHHKLFAAPYSMGLFHASKKRQIVSWTLALGIVGLVKLVKTLVFPYRAIVDAGVVVGLSWGTASIAGIY-IQALRGQVP-GIDPAMPE 292
            +S+LWG VGV  +L  AI+R++PIALEPF K    G    T      YV      AY EGYKGFQ KFSPLVV R+ TL P  SP HH L A  YSM LFHA+KKR IVSW++ +G+  +V LVK   +P+R IVDAGVVVGLSWGT SI G Y I  L G  P G+DPA+PE
Sbjct:  535 VSSLWGAVGVSYILLKAIKRVVPIALEPFGKG--EGVIPLTRSQLIAYVATCFGFAYMEGYKGFQRKFSPLVVSRSFTLQPGKSPIHHLLLAPFYSMALFHATKKRMIVSWSVTIGVAAIVALVKRSPYPWRNIVDAGVVVGLSWGTISILGGYAISLLTGIAPIGVDPALPE 705          
BLAST of NO09G02690 vs. NCBI_GenBank
Match: XP_005756872.1 (hypothetical protein EMIHUDRAFT_121633 [Emiliania huxleyi CCMP1516] >XP_005783251.1 hypothetical protein EMIHUDRAFT_113082 [Emiliania huxleyi CCMP1516] >EOD04443.1 hypothetical protein EMIHUDRAFT_121633 [Emiliania huxleyi CCMP1516] >EOD30822.1 hypothetical protein EMIHUDRAFT_113082 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 166.8 bits (421), Expect = 1.000e-37
Identity = 96/222 (43.24%), Postives = 126/222 (56.76%), Query Frame = 0
Query:   74 AAGGVGAGAVTAPPNQPPPTRAFAMAQLSKITGGATGAADTGSKQHFSLSTLWGVVGVVAVLSNAIRRLLPIALEPFSKAGTAGATAFTPLHWAQYVGFALVMAYAEGYKGFQLKFSPLVVKRAMTL---GPNSPFHHKLFAAPYSMGLFHASKKRQIVSWTLALGIVGLVKLVKTLVFPYRAIVDAGVVVGLSWGTASIAGIYIQALRGQVPGIDPAMPEK 293
            AA    +GA   P            A+   I   A+ +    +     L T WGV G + +L+ AI RL PIA++P  +         T L W  Y G     AY EGYK FQ KFSPLVV+RAMTL    P  P  H   A  YSMGLFHASKKR+ VSW+++LG+  ++ LVK L +P+R++VDAGV  GL WG  SI  IY++AL G+ PG+DP +P++
Sbjct:    2 AAASSASGAAALPRGASARPAIGRAARADLIAASASASPVPTADAARGLRTAWGVCGFLGILAQAIGRLAPIAMQPILQRD------ITMLQWGLYGGTMAFFAYTEGYKAFQCKFSPLVVQRAMTLSTRSPPPPLLHSALAPFYSMGLFHASKKRKTVSWSISLGVACIIGLVKRLPYPWRSVVDAGVCTGLLWGGTSIGVIYLRALAGKSPGVDPELPKE 217          
BLAST of NO09G02690 vs. NCBI_GenBank
Match: XP_002180401.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC47809.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 159.5 bits (402), Expect = 1.600e-35
Identity = 96/204 (47.06%), Postives = 132/204 (64.71%), Query Frame = 0
Query:  104 ITGGATGAADTGSKQHFSLSTLWGVVGVVAVLSNAIRRLLPIALEPF---------SKAGTAGATAFTPLHWAQYVGFALVMAYAEGYKGFQLKFSPLVVKRAMTLGP---NSPFHHKLFAAPYSMGLFHASKKRQIVSWTLALGIVGLVKLVKTLVFPYRAIVDAGVVVGLSWGTASIAGIYIQA-LRGQVP-GIDPAMPEKK 294
            +TG AT AA           ++WG  GV+ +L+ AI+R+LPIALEPF          + GT  + +   L ++ Y+   L  AY EGYKGFQLKFSPLVVKR+ TL P    + ++H + A  YSMGL HA+KKR+I+SW++++G+ G+V  VK   +P+R IVDAGVVVGL+WG+ SI  IYI++ + GQ P  ID A+P  K
Sbjct:   79 VTGVATVAA-----------SIWGTGGVLYILAKAIKRVLPIALEPFVAGAVPLNQVQLGTLVSHSTFHLRYSAYIATCLWFAYVEGYKGFQLKFSPLVVKRSFTLVPGKNGTSWYHFVLAPFYSMGLVHATKKRKIISWSVSIGVAGIVAAVKRFPYPWRNIVDAGVVVGLTWGSLSILLIYIKSWMIGQPPQQIDAALPTAK 271          
BLAST of NO09G02690 vs. NCBI_GenBank
Match: GAX17752.1 (hypothetical protein FisN_24Hh182 [Fistulifera solaris])

HSP 1 Score: 159.5 bits (402), Expect = 1.600e-35
Identity = 85/175 (48.57%), Postives = 117/175 (66.86%), Query Frame = 0
Query:  124 TLWGVVGVVAVLSNAIRRLLPIALEPFSKAGTAGATAFTPLHWAQYVGFALVMAYAEGYKGFQLKFSPLVVKRAMTLGP---NSPFHHKLFAAPYSMGLFHASKKRQIVSWTLALGIVGLVKLVKTLVFPYRAIVDAGVVVGLSWGTASIAGIYIQA-LRGQVPGIDPAMPEKKV 295
            ++WG  GV+ +L+ AI+R++PIA EPF     AGA   T      Y+   L  AY EGYKGFQ KFSPLVV R+ TL P    + ++H LFA  YSMG+ HA++KR IVSW++ +G+  +V LVK   +P+R IVDAGVV GL+WG+ SI  +YI+A ++G+ P +D A+P   V
Sbjct:   89 SIWGTGGVLYILAKAIKRVMPIAQEPF----LAGAVPLTQFQLGAYIVTCLWFAYVEGYKGFQQKFSPLVVTRSFTLIPGKNGTQWYHFLFAPLYSMGMIHATRKRAIVSWSVTMGVAAIVALVKRFPYPWRNIVDAGVVAGLTWGSLSILFLYIRAWMQGKPPAVDAALPASVV 259          
BLAST of NO09G02690 vs. NCBI_GenBank
Match: GAX22895.1 (hypothetical protein FisN_24Lh182 [Fistulifera solaris])

HSP 1 Score: 156.4 bits (394), Expect = 1.400e-34
Identity = 83/171 (48.54%), Postives = 115/171 (67.25%), Query Frame = 0
Query:  124 TLWGVVGVVAVLSNAIRRLLPIALEPFSKAGTAGATAFTPLHWAQYVGFALVMAYAEGYKGFQLKFSPLVVKRAMTLGP---NSPFHHKLFAAPYSMGLFHASKKRQIVSWTLALGIVGLVKLVKTLVFPYRAIVDAGVVVGLSWGTASIAGIYIQA-LRGQVPGIDPAMP 291
            ++WG  GV+ +L+ AI+R++PIA EPF     AGA   T      Y+   L  AY EGYKGFQ KFSPLVV R+ TL P    + ++H L A  YSMG+ HA++KR IVSW++ +G+  +V LVK   +P+R IVDAGVV GL+WG+ SI  +YI+A ++G+ P +D A+P
Sbjct:   68 SIWGTGGVLYILAKAIKRVMPIAQEPF----LAGAVPLTQFQLGAYIVTCLWFAYVEGYKGFQQKFSPLVVTRSFTLIPGKNGTQWYHFLLAPLYSMGMIHATRKRAIVSWSVTMGVAAIVALVKRFPYPWRNIVDAGVVAGLTWGSLSILFLYIRAWMQGKPPAVDAALP 234          
BLAST of NO09G02690 vs. NCBI_GenBank
Match: KOO31125.1 (hypothetical protein Ctob_002280 [Chrysochromulina sp. CCMP291])

HSP 1 Score: 155.6 bits (392), Expect = 2.400e-34
Identity = 90/211 (42.65%), Postives = 127/211 (60.19%), Query Frame = 0
Query:   80 AGAVTAPPNQPPPTRAFAMAQLSKITGGATGAADTGSKQHFSLSTLWGVVGVVAVLSNAIRRLLPIALEPFSKAGTAGATAFTPLHWAQYVGFALVMAYAEGYKGFQLKFSPLVVKRAMTLGPNSPFHHKLFAAPYSMGLFHASKKRQIVSWTLALGIVGLVKLVKTLVFPYRAIVDAGVVVGLSWGTASIAGIYIQALRGQVPGIDPAMP 291
            A A+T PP+      + A      +   A+ AA    +    ++  WGV G + +L++AI+RL PIA++PF +   +       L W  Y G   + AY EGY  FQ KFSPLVV+RAMTL  ++   H   A  YSMGL HA+KKR+IVSW++++ +  +V +VK L +P+R+IVDAGV  GL+WG  SI  IY +AL G  PG+DP +P
Sbjct:   17 ADALTVPPSIRVLRPSAAAPSPVLVAAKASPAA---PRNAHGIAVAWGVCGFLGILASAIKRLAPIAMQPFLQRDLSW------LQWGFYGGSMGIFAYVEGYGAFQKKFSPLVVERAMTLKQSTSPVHIALAPFYSMGLMHATKKRKIVSWSVSMSVAMVVGIVKRLPYPWRSIVDAGVCTGLAWGAVSIVIIYARALAGTPPGVDPCLP 218          
BLAST of NO09G02690 vs. NCBI_GenBank
Match: CBN75370.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 149.8 bits (377), Expect = 1.300e-32
Identity = 95/230 (41.30%), Postives = 126/230 (54.78%), Query Frame = 0
Query:   82 AVTAPPNQPPPTRAFAMAQLSKITGGATGAADTGSKQ--HFSLSTLWGVVGVVAVLSNAIRRLLPIALEPFSKAGTAGATAFTPLHWAQYVGFALVMAYAEGYKGFQLKFSPLVVKRAMTLGPNSPFH----------------HKLFAAPYSMGLFHASKKRQIVSWTLALGIVGLVKLVKTLVFPYRAIVDAGVVVGLSWGTASIAGIYIQALRGQVPGIDPAMPEKK 294
            A  AP N  P      M +   +TGG          +   F +++ WGVV VV +L NA++RL PIA++PFS+A                              GFQ KFSPLVVKRA+TL   +                     L A PYSMGLFHA+KKR+ VSW+L  G++ LV++VK L +P+R+IVDAGVVVGLS+GT SI  I+ +A+ G+ P IDPA+PE+K
Sbjct:  114 AAVAPKNTLP-----LMGKALFVTGGGXXXXXXXXXEPAGFGVASAWGVVSVVFILMNAVKRLAPIAMQPFSRASL----------------------------GFQKKFSPLVVKRALTLDQAAXXXXXXXXXXXXXXXAGPLRLLLAGPYSMGLFHATKKRKTVSWSLTAGVLCLVQMVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARAILGKAPSIDPALPEEK 310          
BLAST of NO09G02690 vs. NCBI_GenBank
Match: SFD59587.1 (hypothetical protein SAMN02745121_00799 [Nannocystis exedens] >PCC66437.1 hypothetical protein NAEX_09025 [Nannocystis exedens])

HSP 1 Score: 140.2 bits (352), Expect = 1.000e-29
Identity = 76/166 (45.78%), Postives = 104/166 (62.65%), Query Frame = 0
Query:  126 WGVVGVVAVLSNAIRRLLPIALEPFSKAGTAGATAFTPLHWAQYVGFALVMAYAEGYKGFQLKFSPLVVKRAMTLGPNSPFHHKLFAAPYSMGLFHASKKRQIVSWTLALGIVGLVKLVKTLVFPYRAIVDAGVVVGLSWGTASIAGIYIQALRGQVPGIDPAMPE 292
            WG++GVVA+L +AI RL P+A+EP +          TPL WA YVG++L   YAEGYKGFQ  F P  V RA  L       H   A  + MGLF+A++KR ++SW L +G+  LV LV+ L  P+R IVDAGVV+GLS+GT ++   +   LRG+   + P +P+
Sbjct:   33 WGMLGVVALLVSAIVRLTPLAVEPLT-------VGMTPLQWALYVGWSLFNLYAEGYKGFQKAFVPRAVARAFYLARYPRPLHVALAPLFCMGLFYANRKRLMLSWGLVIGVTALVTLVRGLDQPWRGIVDAGVVLGLSYGTVALLAAFFAVLRGRPITVSPQVPD 191          
The following BLAST results are available for this feature:
BLAST of NO09G02690 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27568.11.100e-9569.15hypothetical protein Naga_100015g35 [Nannochlorops... [more]
XP_002289331.19.000e-4255.75predicted protein [Thalassiosira pseudonana CCMP13... [more]
EJK76252.18.400e-4056.65hypothetical protein THAOC_01998 [Thalassiosira oc... [more]
XP_005756872.11.000e-3743.24hypothetical protein EMIHUDRAFT_121633 [Emiliania ... [more]
XP_002180401.11.600e-3547.06predicted protein [Phaeodactylum tricornutum CCAP ... [more]
GAX17752.11.600e-3548.57hypothetical protein FisN_24Hh182 [Fistulifera sol... [more]
GAX22895.11.400e-3448.54hypothetical protein FisN_24Lh182 [Fistulifera sol... [more]
KOO31125.12.400e-3442.65hypothetical protein Ctob_002280 [Chrysochromulina... [more]
CBN75370.11.300e-3241.30conserved unknown protein [Ectocarpus siliculosus][more]
SFD59587.11.000e-2945.78hypothetical protein SAMN02745121_00799 [Nannocyst... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL122nonsL122Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL120nonsL120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR022ncniR022Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR129ngnoR129Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010758NSK010758Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G02690.1NO09G02690.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|588596gene_4279Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100015g35gene3002Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G02690.1NO09G02690.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G02690 ID=NO09G02690|Name=NO09G02690|organism=Nannochloropsis oceanica|type=gene|length=888bp
ATGCATGGTGGTTGCCCGCTTCGAGTTCTGCTTGGCCTCCCGCTCGTTCT
CTGCGTCCTCCTTTCCCCCACCATTTTCGCCTTCCGTCGCCCATTGCTCA
GCGCCCGCCCCGCTGCCTCTGCCTTTGGCTGGTCCTCGTCTAAGCAACGA
GCCGCCACCACCTTTTCGTTCGGGTGGAAAAACAAGCTTAGCGCATCGTC
CTTCACTTCGTCGTGGCCAGCAGCAGGAGGTGTAGGAGCAGGAGCAGTGA
CGGCTCCACCAAATCAACCACCGCCTACCCGCGCCTTCGCCATGGCGCAG
CTGAGCAAGATCACAGGTGGCGCTACCGGCGCCGCTGACACAGGATCTAA
GCAGCATTTCTCGCTCTCGACGCTTTGGGGCGTCGTTGGCGTGGTGGCTG
TGCTTAGCAACGCCATCCGCCGTCTCTTGCCCATTGCTCTCGAGCCGTTC
AGCAAGGCCGGGACCGCCGGTGCCACTGCCTTTACACCTCTCCACTGGGC
GCAATACGTGGGGTTTGCGTTGGTTATGGCCTACGCTGAGGGTTACAAGG
GCTTTCAACTCAAGTTCTCTCCGCTAGTAGTCAAGCGAGCGATGACCTTG
GGACCTAACTCTCCCTTCCACCACAAGCTGTTCGCGGCCCCCTACAGCAT
GGGTCTCTTCCACGCCAGCAAAAAACGACAAATTGTGTCGTGGACACTCG
CCCTGGGCATTGTGGGATTGGTGAAATTAGTCAAGACGTTGGTGTTTCCG
TACAGGGCTATAGTAGACGCGGGGGTGGTGGTGGGGTTGTCATGGGGTAC
GGCCTCGATTGCGGGTATTTACATCCAGGCGCTGCGGGGACAGGTGCCAG
GGATCGATCCGGCCATGCCAGAGAAGAAGGTGCAATGA
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protein sequence of NO09G02690.1

>NO09G02690.1-protein ID=NO09G02690.1-protein|Name=NO09G02690.1|organism=Nannochloropsis oceanica|type=polypeptide|length=296bp
MHGGCPLRVLLGLPLVLCVLLSPTIFAFRRPLLSARPAASAFGWSSSKQR
AATTFSFGWKNKLSASSFTSSWPAAGGVGAGAVTAPPNQPPPTRAFAMAQ
LSKITGGATGAADTGSKQHFSLSTLWGVVGVVAVLSNAIRRLLPIALEPF
SKAGTAGATAFTPLHWAQYVGFALVMAYAEGYKGFQLKFSPLVVKRAMTL
GPNSPFHHKLFAAPYSMGLFHASKKRQIVSWTLALGIVGLVKLVKTLVFP
YRAIVDAGVVVGLSWGTASIAGIYIQALRGQVPGIDPAMPEKKVQ*
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Synonyms
Publications