jgi.p|Nanoce1779_2|565691, gene_4245 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|565691
Unique Namegene_4245
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_10:99492..101438 -

Link to JBrowse

Properties
Property NameValue
TranscriptId565777
ProteinId565691
Product nameP-loop containing nucleoside triphosphate hydrolase protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_10supercontigscaffold_10:99492..101438 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0045259proton-transporting ATP synthase complex
GO:0016469proton-transporting two-sector ATPase complex
Vocabulary: Molecular Function
TermDefinition
GO:0046933proton-transporting ATP synthase activity, rotational mechanism
GO:0046961proton-transporting ATPase activity, rotational mechanism
GO:0000166nucleotide binding
GO:0017111nucleoside-triphosphatase activity
GO:0015078proton transmembrane transporter activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL021ncniL021Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G03010NO09G03010Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|565691mRNA_4245-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|565691mRNA_4245Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|565691

>mRNA_4245-protein ID=mRNA_4245-protein|Name=jgi.p|Nanoce1779_2|565691|organism=Nannochloropsis oceanica|type=polypeptide|length=649bp
MGGGGGAAPHADLFLAELFGGVKNKPREGSVVQLHQNALARISGLREARI
HDLVILTQPDGSTRQGLVIDLELNTVAVALLDQDLPTEGADAVLTGTTPS
IRVGPAIVGRVIDPLGRPIPHLETNLINDKAAADSSLPTISLPMLSSSSS
QHLAPSIMARKPLCHRLRTGIKALDIFHPIGHGQSVGLLGKPGSGKTTLA
LQILANQKPSSSSLPSSLPLTHCIYVAIGQDSRAITRIVDQLTRAGCIES
VTIIAATEDMPPGLRYLAPFAGCAVGEYWRDKGGRALVVFDDLSRHESAY
SEMARFLLKPEVERGLALHGPLLERCAQLSDLKGGGAMTALVLVEGEAVD
GEERAWNQEERESGGHGLAHRINSLVDHAINLNLKLAQRKIFPSVDVTQH
MNLQSPGMALVPEPAKGCVQQLRILWAEALDDEAGAKLAEELGIQAMEEG
EERKVERLEYLERVRVLFEQRREEGGEGGEGMGVDEAGVVLVLLCCLQEE
MLMGLEVGTVRELERVLSQELPRAKGWQKLKAQVEGLARQADARTVAEAF
WEAHMAAQGRGRGEEEGGKEERRGEATLAYVKSVSVGGETQALSQEAGRV
YRRCSDVLTQAINYAQKMQQIAKLMGKGRVGQEAGAGRMQTNVGKRRR*
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Synonyms
Publications