NO09G03010, NO09G03010 (gene) Nannochloropsis oceanica

Overview
NameNO09G03010
Unique NameNO09G03010
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2254
Alignment locationchr9:879163..881416 +

Link to JBrowse

Properties
Property NameValue
DescriptionAtp synthase alpha subunit
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:879163..881416 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0005524ATP binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR000194ATPase_F1/V1/A1_a/bsu_nucl-bd
IPR003593AAA+_ATPase
Vocabulary: Biological Process
TermDefinition
GO:1902600proton transmembrane transport
GO:0046034ATP metabolic process
Homology
BLAST of NO09G03010 vs. NCBI_GenBank
Match: EWM27503.1 (atp synthase alpha subunit [Nannochloropsis gaditana])

HSP 1 Score: 771.5 bits (1991), Expect = 2.100e-219
Identity = 410/650 (63.08%), Postives = 489/650 (75.23%), Query Frame = 0
Query:   43 PHADLFLAELFGGVKNKPREGSVVQLHQNALARISGLREARIHDLVILTQPDGSTRQGLVIDLELNTVAVALLDQDLPTEGADAVLTGTTPSIRVGPAIVGRVIDPLGRPIPHLETNLINDKAAADSS-----------LPTISLPMLSSSSSQHLAPSIMARKPLCHRLRTGIKALDIFHPIGHGQSVGLLGKPGSGKTTLALQILANQKPSSSSLPSSLPLTHCIYVAIGQDSRAITRIVDQLTRAGCIESVTIIAATEDMPPGLRYLAPFAGCAVGEYWRDKGGRALVVFDDLSRHEGAYSEMARFLLKPEVERGLALHGPLLERCAQLSDLKGGGAMTALVLVEGEAVDGEERAWNQEERESGGHGLAHRINSLVDHAINLNLKLAQRKIFPSVDVTQHMNLQSPGMALVPEPAKGCVQQLRILWAEALDDEAGAKLAEELGIQAMEEGEERKVERLEYLERVRVLFEQRREEGGEGGEGMGVDEAGVVLVLLCCLQEEMLMGLEVGTVRELERVLSQELPRAKGWQKLKAQVEGLARQADARTVAEAFWEAHMAAQGRGRGEEEGGKEERRGEATLAYVKSVSVGGETQALSQEAGRVYRRCSDVLTQAINYAQKMQQIAKLMGKGRVGQEAGAGRMQTNVGKRR 682
            PHADLFLAELFGGV NK REG++VQ+HQ+ALAR+SGLREA+IHDLV  +QPDGS  QGLV+DLE NTVAVALLD+ +P EGA AVL  T  S+ VGP+++GRV+DPLGRP+P LE  +   +  +  S                 P     SSQ  AP IMARKPLCHRLRTG+K LD+FHP+GHGQSVGL G+PGSGK+TLALQI+ANQ  +++ +PS     HC+YVAIGQ+ RA+   V +L R  C + VT++AAT+DMPPGLR+LAPFAGCA GEYWRD+GGR LVV DDLSRH  AYSEMA+F+ KPEVE GLALHGPLLERCAQ+SD KGGGAMT LV+VEGE   G+E       +E GGHGLAHRINSLVDHAI LN+ LAQR++FP+VDVTQ MNL S G AL+PEPAK CVQQLR++WAEALD EAGAKLAE LGIQA+EEGEE KVE LEYL++VR+LFEQR   G   G  +  DEAG+VL+L+CCLQ ++L  L+ GTVR LER++++ELPRA GW+KL+ +VE L + AD RTVAEAF EAHM AQ R +G E  G +  RGE     V S S+G E  AL++E  RVY+RCSDVL  AINYAQK QQIAKL        +    R QTNV +RR
Sbjct:    3 PHADLFLAELFGGVVNKAREGTLVQIHQSALARVSGLREAKIHDLVHFSQPDGSFTQGLVVDLEQNTVAVALLDKTMPVEGAHAVLADTALSMPVGPSLLGRVVDPLGRPLPDLEPAMATKQVDSTESPSDRTNXXXXXXXXXXXPSTPIMSSQRRAPGIMARKPLCHRLRTGVKVLDVFHPLGHGQSVGLFGRPGSGKSTLALQIIANQN-TAAPVPSPTAPLHCVYVAIGQEPRAVQEAVGELIRRACFQHVTVVAATQDMPPGLRFLAPFAGCAQGEYWRDQGGRVLVVCDDLSRHAAAYSEMAKFMQKPEVEHGLALHGPLLERCAQMSDAKGGGAMTGLVVVEGEVTSGQEGGVG-GGKEDGGHGLAHRINSLVDHAITLNVGLAQRRVFPAVDVTQQMNLPSAGAALLPEPAKWCVQQLRMMWAEALDKEAGAKLAERLGIQAVEEGEEGKVEWLEYLKKVRILFEQRAPSG--EGAVLWTDEAGLVLLLMCCLQRQVLGHLDAGTVRALERIMAEELPRAAGWRKLRREVEALTQHADVRTVAEAFAEAHMTAQRRVKGVEREG-DGGRGEFGQGGVTSPSMGKEGLALNEEVNRVYKRCSDVLAHAINYAQKKQQIAKLTNSADEAGDIARSRSQTNVSRRR 647          
BLAST of NO09G03010 vs. NCBI_GenBank
Match: KKW48253.1 (ATP synthase subunit alpha [Parcubacteria group bacterium GW2011_GWA1_59_11])

HSP 1 Score: 201.1 bits (510), Expect = 1.100e-47
Identity = 148/452 (32.74%), Postives = 240/452 (53.10%), Query Frame = 0
Query:   55 GVKNKPREGSVVQLHQ--NALARISGLREARIHDLVILTQPDGSTRQGLVIDLELNTVAVALLDQDLPTEGADAVL-TGTTPSIRVGPAIVGRVIDPLGRPIPHLETNLINDKAAADSSLPTISLPMLSSSSSQHLAPSIMARKPLCHRLRTGIKALDIFHPIGHGQSVGLLGKPGSGKTTLALQILANQKPSSSSLPSSLPLTHCIYVAIGQDSRAITRIVDQLTRAGCIESVTIIAATEDMPPGLRYLAPFAGCAVGEYWRDKGGRALVVFDDLSRHEGAYSEMARFLLKP---EVERG--LALHGPLLERCAQLSDLKGGGAMTALVLVEGEAVDGEERAWNQEERESGGHGLAHRINSLVDHAINLNLKLAQRKIFPSVDVTQHMNLQSPGMALVPEPAKGCVQQLRILWAEALDDEAGAKLAEELGIQAMEEGEERKVERLEYLERV 499
            G K+KP   SV ++ +  + + + +GLRE    +L+I+   +G  R+ + ++LE  TV   +LD  L     D V  TGT  S++VG  ++GRV+DPLG P+   +  + N +     +    +L        ++ APS++ R+P+   L TG+K++D   PIG GQ   ++G   +GKT + L  + NQK  +       P+  C+YVA+GQ    I +IV+ L   G +E   +++A    P  L YLAPFAGCA+GEY+RDKG  A+VV+DDLS+H  AY +++  L +P   E   G    LH  LLER A+LS  KGGG++TAL +VE +   G+  A+           +   I S+ D  I L   L  + I P+V+V   +++   G A   +  K    +LR+  A+  +  A  + A +     ++E  ++++ + + +  V
Sbjct:   15 GFKDKPEWESVGKIIEVGDGIVKFNGLRETLSQELLIIETSEGE-RRAMALNLEEETVGALVLDDYLSIRTGDTVKGTGTVLSLQVGREMIGRVVDPLGNPLDG-KGPIFNAQNTEHKTQTRYNL--------ENRAPSVLEREPVNTPLHTGLKSIDSMIPIGRGQRELVIGDRQTGKTAIVLDTIINQKNDTG---RRTPV--CVYVAVGQKESKIAKIVETLRAKGALEYSIVVSAPASSPAALWYLAPFAGCAIGEYFRDKGEDAVVVYDDLSKHAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAAKLSKEKGGGSLTALPIVETQL--GDVTAY-----------IPTNIISITDGQIYLESDLFYQGIRPAVNV--GLSVSRVGSAAQTKAMKKVAGRLRLTLAQFRELAAFVQFASD-----VDEATQKRIRQGQAMTEV 431          
BLAST of NO09G03010 vs. NCBI_GenBank
Match: KUK26688.1 (ATP synthase subunit alpha [Acetothermia bacterium 64_32])

HSP 1 Score: 199.5 bits (506), Expect = 3.300e-47
Identity = 157/464 (33.84%), Postives = 234/464 (50.43%), Query Frame = 0
Query:   55 GVKNKPREGSVVQLHQNALARISGLREARIHDLVILTQPDGSTRQGLVIDLELNTVAVALLDQDLP-TEGADAVLTGTTPSIRVGPAIVGRVIDPLGRPIPHLETNLINDKAAADSSLPTISLPMLSSSSSQHLAPSIMARKPLCHRLRTGIKALDIFHPIGHGQSVGLLGKPGSGKTTLALQILANQKPSSSSLPSSLPLTHCIYVAIGQDSRAITRIVDQLTRAGCIESVTIIAATEDMPPGLRYLAPFAGCAVGEYWRDKGGRALVVFDDLSRHEGAYSEMARFLLKP---EVERG--LALHGPLLERCAQLSDLKGGGAMTALVLVEGEAVDGEERAWNQEERESGGHGLAHRINSLVDHAINLNLKLAQRKIFPSVDVTQHMNLQSPGMALVPEPAKGCVQQLRILWAEALDDEAGAKLAEEL----------GIQAMEEGEERKVERLEYLERVRVLF 503
            G   K  E  VV    + +AR+ GLR A   +L+           GLV+DL+ ++V VALL  D    EG +   TG      VG   +GRV+DPLGRP+              D   P   +       +   AP ++ARKP+   L+TGIK +D   PIG GQ   ++G   +GKT +A+  + NQK              CIYVAIGQ S  I ++VD L R G +E   ++AA  + P  L+Y+AP+AGCA+GEY+RDKG  AL+++DDLS+H  AY E++  L +P   E   G     H  LLER A+LSD  GGG++TAL +VE +A  G+  ++           +   + S+ D  I L   L  +   P+++    ++ +  G A +P   K    QLR+  A+  D  A A+ A+EL          G + ME  ++ + + +   E++ +L+
Sbjct:   19 GADLKMEEVGVVVEVGDGIARVWGLRSAVASELLRFP----GDIYGLVLDLQEDSVGVALLGPDEGIKEGDEVRRTGRVLQTPVGEGFLGRVVDPLGRPL--------------DGGPP---IEPAGYRKTDEKAPGVIARKPVDTPLQTGIKCIDALTPIGRGQRELIIGDRRTGKTAIAIDTIINQKGQG---------VFCIYVAIGQKSSTIAKVVDALKRYGAMEYTVVVAAAAEDPAPLQYIAPYAGCAMGEYFRDKGQDALIIYDDLSKHAVAYREISLLLRRPPGREAYPGDIFYTHSRLLERAARLSDEHGGGSLTALPIVETKA--GDITSY-----------IPTNLISITDGQIYLEADLFNKGQRPAMNAGLSVS-RVGGAAQIP-AMKEVAGQLRLELAQYRDLAAFAEFAQELDEASRAQLARGERVMEVLKQPQFQPMPVEEQIAILY 437          
BLAST of NO09G03010 vs. NCBI_GenBank
Match: OIP43143.1 (F0F1 ATP synthase subunit alpha [Candidatus Desantisbacteria bacterium CG2_30_40_21])

HSP 1 Score: 198.4 bits (503), Expect = 7.400e-47
Identity = 146/425 (34.35%), Postives = 223/425 (52.47%), Query Frame = 0
Query:   58 NKPREGSVVQLHQNALARISGLREARIHDLVILTQPDGSTRQGLVIDLELNTVAVALLDQDLP-TEGADAVLTGTTPSIRVGPAIVGRVIDPLGRPIPHLETNLINDKAAADSSLPTISLPMLSSSSSQHLAPSIMARKPLCHRLRTGIKALDIFHPIGHGQSVGLLGKPGSGKTTLALQILANQKPSSSSLPSSLPLTHCIYVAIGQDSRAITRIVDQLTRAGCIESVTIIAATEDMPPGLRYLAPFAGCAVGEYWRDKGGRALVVFDDLSRHEGAYSEMARFLLKP---EVERG--LALHGPLLERCAQLSDLKGGGAMTALVLVEGEAVDGEERAWNQEERESGGHGLAHRINSLVDHAINLNLKLAQRKIFPSVDVTQHMNLQSPGMALVPEPAKGCVQQLRILWAEALDDEAGAKLAEEL 477
            N    G+VVQ+  N +ARI GL  A   +L+  +    S  QG+V++LE  TV+  ++  D+   EG  A LTG    + VG  ++GRV++ LG+PI              D   P   +   + +  ++ AP ++ R P+   L+TGIKA+D   PIG GQ   ++     GKT +A+  + NQK             +CIYVAIGQ    +  +V  L + GC+E VTI+ AT   P  L+Y++P+ GCA+GEY+RDKG  ALVV+DDLS+H  AY +M+  L +P   E   G    LH  LLER A+LS  KGGG++TAL ++E +A  G+  A+           +   + S+ D  I L+ +     I P+++V   +++   G +   +  K     LR+  A+  +  A A+ A +L
Sbjct:   23 NVTEVGTVVQIGDN-VARIYGLSNAMAGELIEFS----SGVQGMVLNLEEETVSAVVMGSDVEIKEGDTAKLTGKIVEVPVGECMLGRVVNALGQPI--------------DGKGP---IKAKTFNPIENRAPGVVDRMPVKEPLQTGIKAIDAMTPIGRGQRELIISDRQLGKTAIAIDTILNQKGKD---------MYCIYVAIGQKQSTVAHVVSILEKHGCMEFVTIVLATASDPASLQYISPYTGCAIGEYFRDKGKHALVVYDDLSKHATAYRQMSLLLRRPPGREAYPGDIFYLHSRLLERAAKLSLEKGGGSLTALPIIETQA--GDVSAY-----------IPTNVISITDGQIYLDSESFYAGIKPAINV--GLSVSRVGSSAQLKAMKQVAGTLRLGLAQYREMAAFAQFASDL 401          
BLAST of NO09G03010 vs. NCBI_GenBank
Match: PIP40978.1 (F0F1 ATP synthase subunit alpha [Candidatus Desantisbacteria bacterium CG23_combo_of_CG06-09_8_20_14_all_40_23] >PIX16795.1 F0F1 ATP synthase subunit alpha [Candidatus Desantisbacteria bacterium CG_4_8_14_3_um_filter_40_12])

HSP 1 Score: 198.0 bits (502), Expect = 9.600e-47
Identity = 146/425 (34.35%), Postives = 223/425 (52.47%), Query Frame = 0
Query:   58 NKPREGSVVQLHQNALARISGLREARIHDLVILTQPDGSTRQGLVIDLELNTVAVALLDQDLP-TEGADAVLTGTTPSIRVGPAIVGRVIDPLGRPIPHLETNLINDKAAADSSLPTISLPMLSSSSSQHLAPSIMARKPLCHRLRTGIKALDIFHPIGHGQSVGLLGKPGSGKTTLALQILANQKPSSSSLPSSLPLTHCIYVAIGQDSRAITRIVDQLTRAGCIESVTIIAATEDMPPGLRYLAPFAGCAVGEYWRDKGGRALVVFDDLSRHEGAYSEMARFLLKP---EVERG--LALHGPLLERCAQLSDLKGGGAMTALVLVEGEAVDGEERAWNQEERESGGHGLAHRINSLVDHAINLNLKLAQRKIFPSVDVTQHMNLQSPGMALVPEPAKGCVQQLRILWAEALDDEAGAKLAEEL 477
            N    G+VVQ+  N +ARI GL  A   +L+  +    S  QG+V++LE  TV+  ++  D+   EG  A LTG    + VG  ++GRV++ LG+PI              D   P   +   + +  ++ AP ++ R P+   L+TGIKA+D   PIG GQ   ++     GKT +A+  + NQK             +CIYVAIGQ    +  +V  L + GC+E VTI+ AT   P  L+Y++P+ GCA+GEY+RDKG  ALVV+DDLS+H  AY +M+  L +P   E   G    LH  LLER A+LS  KGGG++TAL ++E +A  G+  A+           +   + S+ D  I L+ +     I P+++V   +++   G +   +  K     LR+  A+  +  A A+ A +L
Sbjct:   23 NVTEVGTVVQIGDN-VARIYGLSNAMAGELIEFS----SGVQGMVLNLEEETVSAVVMGSDVEIKEGDTAKLTGKIVEVPVGECMLGRVVNALGQPI--------------DGKGP---IKAETFNPIENRAPGVVDRMPVKEPLQTGIKAIDAMTPIGRGQRELIISDRQLGKTAIAIDTILNQKGKD---------MYCIYVAIGQKQSTVAHVVSILEKHGCMEFVTIVLATASDPASLQYISPYTGCAIGEYFRDKGKHALVVYDDLSKHATAYRQMSLLLRRPPGREAYPGDIFYLHSRLLERAAKLSLEKGGGSLTALPIIETQA--GDVSAY-----------IPTNVISITDGQIYLDSESFYAGIKPAINV--GLSVSRVGSSAQLKAMKQVAGTLRLGLAQYREMAAFAQFASDL 401          
BLAST of NO09G03010 vs. NCBI_GenBank
Match: OYT70470.1 (F0F1 ATP synthase subunit alpha [Armatimonadetes bacterium CP1_7O])

HSP 1 Score: 196.8 bits (499), Expect = 2.100e-46
Identity = 140/420 (33.33%), Postives = 225/420 (53.57%), Query Frame = 0
Query:   63 GSVVQLHQNALARISGLREARIHDLVILTQPDGSTRQGLVIDLELNTVAVALLDQDLPTEGADAV-LTGTTPSIRVGPAIVGRVIDPLGRPIPHLETNLINDKAAADSSLPTISLPMLSSSSSQHLAPSIMARKPLCHRLRTGIKALDIFHPIGHGQSVGLLGKPGSGKTTLALQILANQKPSSSSLPSSLPLTHCIYVAIGQDSRAITRIVDQLTRAGCIESVTIIAATEDMPPGLRYLAPFAGCAVGEYWRDKGGRALVVFDDLSRHEGAYSEMARFLLKP---EVERG--LALHGPLLERCAQLSDLKGGGAMTALVLVEGEAVDGEERAWNQEERESGGHGLAHRINSLVDHAINLNLKLAQRKIFPSVDVTQHMNLQSPGMALVPEPAKGCVQQLRILWAEALDDEAGAKLAEEL 477
            G+++Q+  + +AR+ GL +A++ +L+           G+V++LE +++ V +L  D   +  D V  TG    + VG A++GRV+D LGRP+      + ++    D                  +AP ++ R+P+   L+TGIKA+D   PIG GQ   ++G   +GKT + L  + NQK +  S P   P+ +CIYVA+GQ   A+ R VD L R G ++  T++ A+   P  L+Y+AP+AGCA+GEY+RD G  ALVV+DDLS+H  AY  ++  L +P   E   G    LH  LLER A++SD  GGG++TAL ++E +A  G+  A+           +   + S+ D  I L   L    I P+++V   +++   G        K    +LR+  A+  + +A A+ A +L
Sbjct:   29 GTILQV-GDGIARVYGLPDAQMGELLEFPH----EVMGMVLNLEEDSIGVIVLGSDEELKEGDPVKRTGRIAEVPVGKALLGRVVDALGRPLDGKGPIVADEYRRIDV-----------------IAPGVITRQPVKQPLQTGIKAIDAMIPIGRGQRELIIGDRSTGKTAIILDTIINQKYTHES-PEERPV-YCIYVAVGQKMAAVARFVDTLERYGAMQYTTVVVASASDPNSLQYIAPYAGCAMGEYFRDNGMDALVVYDDLSKHAQAYRAVSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDEYGGGSLTALPIIETQA--GDVSAY-----------IPTNVISITDGQIYLEPSLFYAGIRPAINV--GISVSRVGGDAQIRAMKQVAGRLRLDMAQFREVQAFAQFASDL 409          
BLAST of NO09G03010 vs. NCBI_GenBank
Match: WP_079285049.1 (F0F1 ATP synthase subunit alpha [Azospirillum brasilense])

HSP 1 Score: 196.1 bits (497), Expect = 3.700e-46
Identity = 147/454 (32.38%), Postives = 227/454 (50.00%), Query Frame = 0
Query:   59 KPREGSVVQLHQ--NALARISGLREARIHDLVILTQPDGSTRQGLVIDLELNTVAVALLDQDLPTEGADAVLTGTTPSIRVGPAIVGRVIDPLGRPIPHLETNLINDKAAADSSLPTISLPMLSSSSSQHLAPSIMARKPLCHRLRTGIKALDIFHPIGHGQSVGLLGKPGSGKTTLALQILANQKPSSSSLPSSLPLTHCIYVAIGQDSRAITRIVDQLTRAGCIESVTIIAATEDMPPGLRYLAPFAGCAVGEYWRDKGGRALVVFDDLSRHEGAYSEMARFLLKP---EVERG--LALHGPLLERCAQLSDLKGGGAMTALVLVEGEAVDGEERAWNQEERESGGHGLAHRINSLVDHAINLNLKLAQRKIFPSVDVTQHMNLQSPGMALVPEPAKGCVQQLRILWAEALDDEAGAKLAEELGIQAMEEGEERKVERLEYLERVRVLFEQR 506
            KPR  SV ++    + +AR+SGL E R+ +L++   PDG +  GL +DL+     V L D      GA    TG+   + VG A++GRV+DPLG+P+            AA+   P            + +APSI  R  +   L TG  A+D   PIG GQ   L+G   +GKT +A+  + NQ+              C+Y AIGQ S  +  +++ + R G  E   ++ A  D PPGL++LAP+A   + EY+RD+G  ALVV DDL++H   + +++  L +P   E   G    LH  LLER A+L+  KGGG++TAL + E +A  G   A+           +   + S+ D  I L+ KL Q    P+VDV +  ++   G    P P +G  + LR+ +A+ L+ E   +    +        +E+  + + + +RVR L  QR
Sbjct:   29 KPRFDSVGRIESVGDGIARVSGLPETRVDELLLF--PDGVS--GLTVDLDAEIGCVLLGDGPGLASGALVHGTGSVLRVPVGDALMGRVLDPLGKPLDG------GPPVAAERWEPV-----------ERVAPSIAERAAVSEPLLTGTIAIDAMFPIGRGQRELLIGDRATGKTAIAVDAILNQRGGD---------VWCVYAAIGQKSSTVRAVIEAVRRGGAAERTLVVMAGADTPPGLQWLAPYAAVTMAEYFRDRGQHALVVIDDLTKHAAVHRQLSLLLRRPPGREAYPGDVFHLHARLLERAAKLAPAKGGGSLTALPIAETQA--GNLSAY-----------IPTNLISITDGQIVLDTKLFQEGQKPAVDVGR--SVSRVGGRAQPAPLRGLAEPLRLDYAQFLELEVFTRFGGMV--------DEKTRKAVAHGQRVRALLAQR 429          
BLAST of NO09G03010 vs. NCBI_GenBank
Match: WP_104675485.1 (F0F1 ATP synthase subunit alpha [Azospirillum brasilense])

HSP 1 Score: 196.1 bits (497), Expect = 3.700e-46
Identity = 147/454 (32.38%), Postives = 227/454 (50.00%), Query Frame = 0
Query:   59 KPREGSVVQLHQ--NALARISGLREARIHDLVILTQPDGSTRQGLVIDLELNTVAVALLDQDLPTEGADAVLTGTTPSIRVGPAIVGRVIDPLGRPIPHLETNLINDKAAADSSLPTISLPMLSSSSSQHLAPSIMARKPLCHRLRTGIKALDIFHPIGHGQSVGLLGKPGSGKTTLALQILANQKPSSSSLPSSLPLTHCIYVAIGQDSRAITRIVDQLTRAGCIESVTIIAATEDMPPGLRYLAPFAGCAVGEYWRDKGGRALVVFDDLSRHEGAYSEMARFLLKP---EVERG--LALHGPLLERCAQLSDLKGGGAMTALVLVEGEAVDGEERAWNQEERESGGHGLAHRINSLVDHAINLNLKLAQRKIFPSVDVTQHMNLQSPGMALVPEPAKGCVQQLRILWAEALDDEAGAKLAEELGIQAMEEGEERKVERLEYLERVRVLFEQR 506
            KPR  SV ++    + +AR+SGL E R+ +L++   PDG +  GL +DL+     V L D      GA    TG+   + VG A++GRV+DPLG+P+            AA+   P            + +APSI  R  +   L TG  A+D   PIG GQ   L+G   +GKT +A+  + NQ+              C+Y AIGQ S  +  +++ + R G  E   ++ A  D PPGL++LAP+A   + EY+RD+G  ALVV DDL++H   + +++  L +P   E   G    LH  LLER A+L+  KGGG++TAL + E +A  G   A+           +   + S+ D  I L+ KL Q    P+VDV +  ++   G    P P +G  + LR+ +A+ L+ E   +    +        +E+  + + + +RVR L  QR
Sbjct:   25 KPRFDSVGRIESVGDGIARVSGLPETRVDELLLF--PDGVS--GLTVDLDAEIGCVLLGDGPGLASGALVHGTGSVLRVPVGDALMGRVLDPLGKPLDG------GPPVAAERWEPV-----------ERVAPSIAERAAVSEPLLTGTIAIDAMFPIGRGQRELLIGDRATGKTAIAVDAILNQRGGD---------VWCVYAAIGQKSSTVRAVIEAVRRGGAAERTLVVMAGADTPPGLQWLAPYAAVTMAEYFRDRGQHALVVIDDLTKHAAVHRQLSLLLRRPPGREAYPGDVFHLHARLLERAAKLAPAKGGGSLTALPIAETQA--GNLSAY-----------IPTNLISITDGQIVLDTKLFQEGQKPAVDVGR--SVSRVGGRAQPAPLRGLAEPLRLDYAQFLELEVFTRFGGMV--------DEKTRKAVAHGQRVRALLAQR 425          
BLAST of NO09G03010 vs. NCBI_GenBank
Match: WP_014297054.1 (MULTISPECIES: F0F1 ATP synthase subunit alpha [Marinitoga] >AEX85983.1 proton translocating ATP synthase, F1 alpha subunit [Marinitoga piezophila KA3] >APT76406.1 ATP F0F1 synthase subunit alpha [Marinitoga sp. 1137])

HSP 1 Score: 195.3 bits (495), Expect = 6.300e-46
Identity = 140/420 (33.33%), Postives = 217/420 (51.67%), Query Frame = 0
Query:   63 GSVVQLHQNALARISGLREARIHDLVILTQPDGSTRQGLVIDLELNTVAVALL-DQDLPTEGADAVLTGTTPSIRVGPAIVGRVIDPLGRPIPHLETNLINDKAAADSSLPTISLPMLSSSSSQHLAPSIMARKPLCHRLRTGIKALDIFHPIGHGQSVGLLGKPGSGKTTLALQILANQKPSSSSLPSSLPLTHCIYVAIGQDSRAITRIVDQLTRAGCIESVTIIAATEDMPPGLRYLAPFAGCAVGEYWRDKGGRALVVFDDLSRHEGAYSEMARFLLKP---EVERG--LALHGPLLERCAQLSDLKGGGAMTALVLVEGEAVDGEERAWNQEERESGGHGLAHRINSLVDHAINLNLKLAQRKIFPSVDVTQHMNLQSPGMALVPEPAKGCVQQLRILWAEALDDEAGAKLAEEL 477
            G ++Q+  + +AR  GLR+A   +LV +   +G    G+ ++LE + V + +L D  +  EG   V TG    + VG  ++GRV++PLG+P+              D   P   +   ++   +  AP ++ RKP+   L+TG+KA+D   PIG GQ   ++G   +GKT +A+  + NQK             HCIYVA+GQ S ++ R V +L + G +E  T++ A+   P  L YLAP+AGCA+GEY+   G  ALVV+DDLS+H  AY E++  L +P   E   G    LH  LLER A+L++  GGG++TAL ++E +A D                 +   + S+ D  I L   L      P+V+V   +++   G A   +  K     LR+  A+  + EA A+ A EL
Sbjct:   28 GWIIQV-GDGIARAYGLRDAMASELVEIHTDEGEVIDGIALNLEEDNVGIIILGDYKVIKEGNKVVRTGRIAEVPVGEELLGRVVNPLGQPL--------------DGKGP---INAKNTRPIEFKAPGVVLRKPVDTPLQTGLKAIDTMIPIGRGQRELIIGDRQTGKTAIAIDTIINQKGKG---------VHCIYVAVGQKSSSVARTVAKLEQHGAMEYTTVVVASASDPASLLYLAPYAGCAMGEYFMFNGKDALVVYDDLSKHAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAARLNEKYGGGSLTALPIIETQANDVSAY-------------IPTNVISITDGQIYLEPSLFYAGQRPAVNV--GLSVSRVGGAAQIKAMKQVAGSLRLDLAQYRELEAFAQFATEL 405          
BLAST of NO09G03010 vs. NCBI_GenBank
Match: KKU05763.1 (ATP synthase subunit alpha [Parcubacteria group bacterium GW2011_GWA2_45_30])

HSP 1 Score: 195.3 bits (495), Expect = 6.300e-46
Identity = 145/420 (34.52%), Postives = 217/420 (51.67%), Query Frame = 0
Query:   63 GSVVQLHQNALARISGLREARIHDLVILTQPDGSTRQGLVIDLELNTVAVALLDQDLPTEGADAVL-TGTTPSIRVGPAIVGRVIDPLGRPIPHLETNLINDKAAADSSLPTISLPMLSSSSSQHLAPSIMARKPLCHRLRTGIKALDIFHPIGHGQSVGLLGKPGSGKTTLALQILANQKPSSSSLPSSLPLTHCIYVAIGQDSRAITRIVDQLTRAGCIESVTIIAATEDMPPGLRYLAPFAGCAVGEYWRDKGGRALVVFDDLSRHEGAYSEMARFLLKP---EVERG--LALHGPLLERCAQLSDLKGGGAMTALVLVEGEAVDGEERAWNQEERESGGHGLAHRINSLVDHAINLNLKLAQRKIFPSVDVTQHMNLQSPGMALVPEPAKGCVQQLRILWAEALDDEAGAKLAEEL 477
            G VV++  + +ARI GL E   ++++      GST  G+  +LE +TV   +L      +  DAV  TG   S+RVG  ++GRVIDPLG P+       ++         P           ++  APS++AR+ +   L TGIK++D   PIG GQ   L+G    GKT++AL  + NQ        S      CIYVA+GQ    I +IV  L   G +E   +++A    P  L YLAPFAGCA+GEY+ DKG  AL+++DDL++H  AY E++  L +P   E   G    LH  LLER A+LS  KGGG++TAL ++E +   G+  A+           +   + S+ D  I L  +L  + I P+V+V   +++   G A   +  K    +LR+  A+  +  A A+ A +L
Sbjct:   26 GRVVEI-GDGIARIYGLAEVGANEMLEF-DSSGSTVSGIAFNLEEDTVGAIILGDYTNIKEGDAVRPTGRVLSVRVGEELIGRVIDPLGNPLDGRGPIFMDSTGIRSLYYP-----------AERPAPSVIARESVNTPLHTGIKSIDAMIPIGRGQRELLIGDRQIGKTSIALDAIINQ-----GRDSRYQTPVCIYVAVGQKESKIAQIVATLKEHGAMEYTIVVSAPASSPASLWYLAPFAGCAMGEYFMDKGKDALIIYDDLTKHAWAYRELSLLLRRPPGREAYPGDIFYLHSRLLERAAKLSKEKGGGSLTALPIIETQL--GDVSAY-----------IPTNVISITDGQIYLEPELFYQGIRPAVNV--GLSVSRVGSAAQTKAMKRVAGKLRLELAQFRELAAFAQFASDL 412          
The following BLAST results are available for this feature:
BLAST of NO09G03010 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27503.12.100e-21963.08atp synthase alpha subunit [Nannochloropsis gadita... [more]
KKW48253.11.100e-4732.74ATP synthase subunit alpha [Parcubacteria group ba... [more]
KUK26688.13.300e-4733.84ATP synthase subunit alpha [Acetothermia bacterium... [more]
OIP43143.17.400e-4734.35F0F1 ATP synthase subunit alpha [Candidatus Desant... [more]
PIP40978.19.600e-4734.35F0F1 ATP synthase subunit alpha [Candidatus Desant... [more]
OYT70470.12.100e-4633.33F0F1 ATP synthase subunit alpha [Armatimonadetes b... [more]
WP_079285049.13.700e-4632.38F0F1 ATP synthase subunit alpha [Azospirillum bras... [more]
WP_104675485.13.700e-4632.38F0F1 ATP synthase subunit alpha [Azospirillum bras... [more]
WP_014297054.16.300e-4633.33MULTISPECIES: F0F1 ATP synthase subunit alpha [Mar... [more]
KKU05763.16.300e-4634.52ATP synthase subunit alpha [Parcubacteria group ba... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL120nonsL120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010835NSK010835Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G03010.1NO09G03010.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|565691gene_4245Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100099g7gene3058Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G03010.1NO09G03010.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G03010 ID=NO09G03010|Name=NO09G03010|organism=Nannochloropsis oceanica|type=gene|length=2254bp
CACCAGTACAGGCACGACGACGACGATGCTCTGTGTCGGTAGCCGCGGCT
TTGGCCGGCTCAAGCTTTTGCAGTTGCCCGCCCTTGCTTCACGCAGgtac
gcccccaacccatcatcacaaacccttctcaatgttgatgttgccctacc
tcccttttcctgcgacacacagGCACACATCAGAACGCAGATCGGCGTCC
TCGATGGGCGGCGGAGGTGGAGCAGCTCCGCACGCGGACCTCTTTTTAGC
CGAGCTATTTGGCGGCGTCAAGAACAAACCGAGGGAGGGGAGCGTGGTCC
AACTGCATCAAAACGCCCTAGCACGGATCAGTGGCCTGCGCGAAGCCAGA
ATACACGACCTAGTCATCTTGACGCAGCCCGACGGGAGCACACGACAGGG
GCTGGTGATTGATTTGGAATTGAACACGGTGGCGGTCGCGCTGCTTGACC
AGGACCTCCCCACGGAAGGGGCTGATGCGGTCTTGACGGGCACCACGCCC
AGCATCCGCGTGGGCCCAGCCATCGTCGGACGCGTCATCGATCCCTTAGG
ACGACCAATACCACACTTAGAAACAAATCTAATAAACGACAAGGCTGCCG
CAGACTCCTCCCTTCCGACCATTTCCTTGCCCATGCTCAGCAGCAGCAGC
AGCCAACACCTCGCCCCAAGCATTATGGCCCGCAAACCCCTCTGCCATCG
CCTTCGCACCGGCATCAAAGCCCTCGACATTTTCCACCCAATTGGCCATG
GGCAGAGTGTTGGCCTCCTCGGGAAACCCGGCTCTGGTAAAACCACCCTG
GCACTCCAAATCCTCGCGAACCAAAAACCCTCCTCCTCCTCCCTCCCGTC
CTCCCTCCCCCTCACCCACTGCATATACGTCGCCATCGGACAAGACTCTC
GCGCCATTACTCGCATCGTGGATCAGCTAACCCGTGCGGGATGTATAGAA
TCAGTCACGATAATTGCAGCTACAGAGGACATGCCTCCGGGCTTGAGGTA
TCTGGCGCCGTTTGCTGGGTGTGCTGTAGGGGAGTACTGGAGAGACAAGG
GTGGGAGGGCTCTGGTAGTGTTCGACGATTTGAGCAGGCATGAAGGCGCT
TATAGTGAGATGGCGAGATTTTTATTGAAGCCAGAGGTGGAGAGGGGGTT
GGCATTGCACGGCCCGTTGCTGGAACGGTGCGCACAGCTGTCGGATCTCA
AGGGAGGGGGAGCGATGACTGCGTTGGTGCTGGTGGAGGGGGAGGCGGTG
GATGGCGAGGAGAGGGCTTGGAATCAAGAAGAGAGAGAAAGCGGAGGGCA
TGGATTGGCGCATCGGATTAATTCACTCGTGGACCACGCGATTAATTTGA
ATTTAAAATTAGCGCAACGGAAGATCTTTCCGTCCGTTGACGTGACCCAG
CATATGAATCTGCAGTCGCCGGGGATGGCGCTGGTGCCAGAGCCAGCGAA
GGGATGTGTGCAGCAGTTGAGAATTTTGTGGGCGGAGGCTTTGGATGATG
AGGCGGGCGCGAAATTGGCGGAGGAGTTAGGGATCCAGGCGATGGAGGAG
GGGGAAGAGAGGAAGGTGGAACGGCTAGAGTATTTGGAGAGGGTGAGGGT
GCTGTTTGAGCAACGGAGGGAGGAAGGGGGGGAGGGAGGGGAAGGAATGG
GAGTGGATGAGGCTGGGGTGGTGTTGGTTTTGCTTTGTTGTTTGCAGGAG
GAGATGCTGATGGGATTGGAGGTGGGGACGGTGAGGGAGTTAGAACGCGT
GTTATCGCAAGAGTTACCGCGGGCGAAGGGATGGCAGAAATTAAAGGCGC
AAGTGGAGGGTCTAGCACGACAGGCAGATGCTAGGACGGTGGCGGAGGCG
TTCTGGGAGGCGCACATGGCGGCGCAAGGACGTGGGAGGGGAGAAGAAGA
GGGAGGGAAGGAGGAGAGGAGAGGGGAGGCGACATTGGCGTATGTCAAGT
CGGTGTCGGTTGGAGGGGAGACGCAGGCGTTGAGTCAAGAGGCAGGACGG
GTTTATCGCCGGTGTTCGGATGTGTTGACGCAAGCGATTAATTACGCGCA
AAAAATGCAGCAGATTGCCAAATTGATGGGGAAAGGCCGGGTAGGCCAAG
AGGCCGGGGCAGGGAGGATGCAGACGAATGTGGGGAAGCGCCGGAGGTAG
ACCTGTGAGGAACTGGTAACGGCCAAAGCACGCCACTAAAGAAAATAGAA
ACAATACGCACATAAAATAAAAATAAAAATGCACTGATGTTCACAAGGCA
ATAC
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protein sequence of NO09G03010.1

>NO09G03010.1-protein ID=NO09G03010.1-protein|Name=NO09G03010.1|organism=Nannochloropsis oceanica|type=polypeptide|length=683bp
MLCVGSRGFGRLKLLQLPALASRRHTSERRSASSMGGGGGAAPHADLFLA
ELFGGVKNKPREGSVVQLHQNALARISGLREARIHDLVILTQPDGSTRQG
LVIDLELNTVAVALLDQDLPTEGADAVLTGTTPSIRVGPAIVGRVIDPLG
RPIPHLETNLINDKAAADSSLPTISLPMLSSSSSQHLAPSIMARKPLCHR
LRTGIKALDIFHPIGHGQSVGLLGKPGSGKTTLALQILANQKPSSSSLPS
SLPLTHCIYVAIGQDSRAITRIVDQLTRAGCIESVTIIAATEDMPPGLRY
LAPFAGCAVGEYWRDKGGRALVVFDDLSRHEGAYSEMARFLLKPEVERGL
ALHGPLLERCAQLSDLKGGGAMTALVLVEGEAVDGEERAWNQEERESGGH
GLAHRINSLVDHAINLNLKLAQRKIFPSVDVTQHMNLQSPGMALVPEPAK
GCVQQLRILWAEALDDEAGAKLAEELGIQAMEEGEERKVERLEYLERVRV
LFEQRREEGGEGGEGMGVDEAGVVLVLLCCLQEEMLMGLEVGTVRELERV
LSQELPRAKGWQKLKAQVEGLARQADARTVAEAFWEAHMAAQGRGRGEEE
GGKEERRGEATLAYVKSVSVGGETQALSQEAGRVYRRCSDVLTQAINYAQ
KMQQIAKLMGKGRVGQEAGAGRMQTNVGKRRR*
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Synonyms
Publications