jgi.p|Nanoce1779_2|577142, gene_377 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|577142
Unique Namegene_377
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_3:938497..939964 +

Link to JBrowse

Properties
Property NameValue
TranscriptId577228
ProteinId577142
Product namePeptide chain release factor 1
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_3supercontigscaffold_3:938497..939964 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0016149translation release factor activity, codon specific
GO:0003747translation release factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006415translational termination
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL047ncniL047Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G03680NO01G03680Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|577142mRNA_377-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|577142mRNA_377Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|577142

>mRNA_377-protein ID=mRNA_377-protein|Name=jgi.p|Nanoce1779_2|577142|organism=Nannochloropsis oceanica|type=polypeptide|length=436bp
MPSSISTSNSGGSAKPGWALVRNKVSNYCFVALWLAATASLTQAFLNPAV
PAATSVMRPTSRRIKQRALHMVLDSFIKTKLDSFSRTYKELTERLGDPDV
IANPTTLMQVNQERMNIEDVVVNYQEWQKLAEDLVGAKQLFNEAAGDPEM
KEMARLEIKELEEKQEMIEKKLVVLMLPTDPLDDRNVMLEIRAGTGGSEA
GLFAGDLIDVYQRYGQTLGWRVRIVEESKNDEGGYKNAVLEIQGEKVYSK
LKFEAGVHRVQRVPATETQGRVHTSTATVAVMPEVDDVQVKIDPKDITLT
TARSGGSGGQNVNKVETAIDLFHKPSGIRIFCTQERSQLKNKELALTMLR
SRLFALEQEKQREAVAGQRRSQIGSGSRSEKIRTYNWKDSRCTDHRLGTN
FPLQMFLDGNLGDITNQCLVLEQQEKLEAMQLTNA*
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Synonyms
Publications