jgi.p|Nanoce1779_2|583127, gene_3706 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|583127
Unique Namegene_3706
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_6:1031851..1033391 -

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Properties
Property NameValue
TranscriptId583213
ProteinId583127
Product nameRibose 5-phosphate isomerase A (phosphoriboisomerase A)-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_6supercontigscaffold_6:1031851..1033391 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004751ribose-5-phosphate isomerase activity
Vocabulary: Biological Process
TermDefinition
GO:0009052pentose-phosphate shunt, non-oxidative branch
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL083ncniL083Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G03720NO08G03720Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|583127mRNA_3706-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|583127mRNA_3706Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|583127

>mRNA_3706-protein ID=mRNA_3706-protein|Name=jgi.p|Nanoce1779_2|583127|organism=Nannochloropsis oceanica|type=polypeptide|length=283bp
MSRQKTLFSVMAMVTVGASAFILPVRQPLHGPALCTRRASTTTARFAVSQ
DELKKQVGYKSVDDYVTSGMVVGLGTGSTAAFAVERLGQKLKAGELKDIV
AIPTSIRTKEQAEGLGIPLVTLDTHSVLDVAIDGADEVDPALNLVKGRGG
ALLREKMVEVCAKKFIVIVDDSKMVPGLGVTGAMPVEITPFCHEHTQRTI
LGLPGVKGAATGKLRMDGDKPYVTDNDNYIVDLYYTAPIADVMAVAGALE
KVVGVVEHGFFLDMTTAVIVAGKTGIDVINKK*
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Synonyms
Publications