jgi.p|Nanoce1779_2|582927, gene_3656 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|582927
Unique Namegene_3656
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_6:884401..887263 +

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Properties
Property NameValue
TranscriptId583013
ProteinId582927
Product nameArf1, ARF family GTPase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_6supercontigscaffold_6:884401..887263 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004842ubiquitin-protein transferase activity
GO:0005525GTP binding
Vocabulary: Biological Process
TermDefinition
GO:0051438regulation of ubiquitin-protein transferase activity
GO:0051443positive regulation of ubiquitin-protein transferase activity
GO:0051444negative regulation of ubiquitin-protein transferase activity
GO:0006886intracellular protein transport
GO:0007264small GTPase mediated signal transduction
GO:0015031protein transport
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL083ncniL083Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G03280NO08G03280Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|582927mRNA_3656-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|582927mRNA_3656Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|582927

>mRNA_3656-protein ID=mRNA_3656-protein|Name=jgi.p|Nanoce1779_2|582927|organism=Nannochloropsis oceanica|type=polypeptide|length=182bp
MGLTFSRIWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIG
FNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRV
DAARDELHRMLNEDELRDSILLVFANKQDLPQAMNAAEMTDKLGLSSLRH
RQWYIQACCATSGDGLYEGLDWLSAALQKRK*
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Synonyms
Publications