NO08G03280, NO08G03280 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G03280 vs. NCBI_GenBank
Match: EWM26802.1 (adp-ribosylation factor [Nannochloropsis gaditana]) HSP 1 Score: 372.5 bits (955), Expect = 7.600e-100 Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0 Query: 1 MGLTFSRIWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSILLVFANKQDLPQAMNAAEMTDKLGLSSLRHRQWYIQACCATSGDGLYEGLDWLSAALQKRK 182 MGLTFSRIWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSILLVFANKQDLPQAMNAAEMTDKLGLSSLRHRQWYIQACCATSGDGLYEGLDWLSAALQKRK Sbjct: 1 MGLTFSRIWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSILLVFANKQDLPQAMNAAEMTDKLGLSSLRHRQWYIQACCATSGDGLYEGLDWLSAALQKRK 181
BLAST of NO08G03280 vs. NCBI_GenBank
Match: CBJ48963.1 (Arf1, ARF family GTPase [Ectocarpus siliculosus]) HSP 1 Score: 356.3 bits (913), Expect = 5.600e-95 Identity = 171/181 (94.48%), Postives = 175/181 (96.69%), Query Frame = 0 Query: 1 MGLTFSRIWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSILLVFANKQDLPQAMNAAEMTDKLGLSSLRHRQWYIQACCATSGDGLYEGLDWLSAALQKRK 182 MGL FSR+WERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELR+SILLVFANKQDLP AM+AAEMTDKLGL LRHRQWYIQACCAT+GDGLYEGLDWLSA L KRK Sbjct: 1 MGLAFSRLWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRESILLVFANKQDLPNAMSAAEMTDKLGLHGLRHRQWYIQACCATTGDGLYEGLDWLSATLSKRK 181
BLAST of NO08G03280 vs. NCBI_GenBank
Match: XP_009035447.1 (ADP-ribosylation factor [Aureococcus anophagefferens] >EGB09371.1 ADP-ribosylation factor [Aureococcus anophagefferens]) HSP 1 Score: 355.1 bits (910), Expect = 1.300e-94 Identity = 171/181 (94.48%), Postives = 175/181 (96.69%), Query Frame = 0 Query: 1 MGLTFSRIWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSILLVFANKQDLPQAMNAAEMTDKLGLSSLRHRQWYIQACCATSGDGLYEGLDWLSAALQKRK 182 MGL FSRIWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVD ARDELHRMLNEDELR+SILLVFANKQDLP AM+AAEMTDKLGL+ LRHRQWYIQACCAT+GDGLYEGLDWLSA L KRK Sbjct: 1 MGLAFSRIWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDNARDELHRMLNEDELRESILLVFANKQDLPNAMSAAEMTDKLGLNGLRHRQWYIQACCATTGDGLYEGLDWLSATLTKRK 181
BLAST of NO08G03280 vs. NCBI_GenBank
Match: XP_008610697.1 (ADP-ribosylation factor [Saprolegnia diclina VS20] >XP_008878656.1 ADP-ribosylation factor 2 [Aphanomyces invadans] >XP_009829459.1 ADP-ribosylation factor 2 [Aphanomyces astaci] >XP_012199223.1 ADP-ribosylation factor [Saprolegnia parasitica CBS 223.65] >EQC35935.1 ADP-ribosylation factor [Saprolegnia diclina VS20] >ETV81601.1 ADP-ribosylation factor 2 [Aphanomyces astaci] >ETV92620.1 ADP-ribosylation factor 2 [Aphanomyces invadans] >KDO30042.1 ADP-ribosylation factor [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 352.8 bits (904), Expect = 6.200e-94 Identity = 169/181 (93.37%), Postives = 176/181 (97.24%), Query Frame = 0 Query: 1 MGLTFSRIWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSILLVFANKQDLPQAMNAAEMTDKLGLSSLRHRQWYIQACCATSGDGLYEGLDWLSAALQKRK 182 MG+ FSR++ER+FGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSILLVFANKQDLP AM+AAEMTDKLGL LRHRQW+IQACCAT+GDGLYEGLDWLSA LQKRK Sbjct: 1 MGMAFSRVFERLFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSILLVFANKQDLPNAMSAAEMTDKLGLHGLRHRQWFIQACCATTGDGLYEGLDWLSATLQKRK 181
BLAST of NO08G03280 vs. NCBI_GenBank
Match: OQR81623.1 (ADP-ribosylation factor family [Thraustotheca clavata]) HSP 1 Score: 351.7 bits (901), Expect = 1.400e-93 Identity = 168/181 (92.82%), Postives = 176/181 (97.24%), Query Frame = 0 Query: 1 MGLTFSRIWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSILLVFANKQDLPQAMNAAEMTDKLGLSSLRHRQWYIQACCATSGDGLYEGLDWLSAALQKRK 182 MG+ FSR++ER+FGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSILLVFANKQDLP AM+AAEMTDKLGL LRHRQW+IQACCAT+GDGLYEGLDWLSA LQK+K Sbjct: 1 MGMAFSRVFERLFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSILLVFANKQDLPNAMSAAEMTDKLGLHGLRHRQWFIQACCATTGDGLYEGLDWLSATLQKKK 181
BLAST of NO08G03280 vs. NCBI_GenBank
Match: XP_002900891.1 (ADP-ribosylation factor family [Phytophthora infestans T30-4] >XP_009521591.1 putative GTP-binding ADP-ribosylation factor [Phytophthora sojae] >EEY59698.1 ADP-ribosylation factor family [Phytophthora infestans T30-4] >EGZ26303.1 putative GTP-binding ADP-ribosylation factor [Phytophthora sojae] >ETI36243.1 ADP-ribosylation factor 1 [Phytophthora parasitica P1569] >ETO64937.1 ADP-ribosylation factor 1 [Phytophthora parasitica P1976] >ETP06037.1 ADP-ribosylation factor 1 [Phytophthora parasitica CJ01A1] >KUF72061.1 ADP-ribosylation factor 2-B [Phytophthora nicotianae] >POM70508.1 Putative GTP-binding ADP-ribosylation factor [Phytophthora palmivora var. palmivora]) HSP 1 Score: 350.9 bits (899), Expect = 2.400e-93 Identity = 167/181 (92.27%), Postives = 176/181 (97.24%), Query Frame = 0 Query: 1 MGLTFSRIWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSILLVFANKQDLPQAMNAAEMTDKLGLSSLRHRQWYIQACCATSGDGLYEGLDWLSAALQKRK 182 MG+ FSR++ER+FGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDS+LLVFANKQDLP AM+AAEMTDKLGL LRHRQW+IQACCAT+GDGLYEGLDWLSA LQK+K Sbjct: 1 MGMAFSRVFERLFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSVLLVFANKQDLPNAMSAAEMTDKLGLHGLRHRQWFIQACCATTGDGLYEGLDWLSATLQKQK 181
BLAST of NO08G03280 vs. NCBI_GenBank
Match: XP_024584861.1 (adp-ribosylation factor [Plasmopara halstedii] >CEG48492.1 adp-ribosylation factor [Plasmopara halstedii]) HSP 1 Score: 350.9 bits (899), Expect = 2.400e-93 Identity = 167/181 (92.27%), Postives = 176/181 (97.24%), Query Frame = 0 Query: 1 MGLTFSRIWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSILLVFANKQDLPQAMNAAEMTDKLGLSSLRHRQWYIQACCATSGDGLYEGLDWLSAALQKRK 182 MG+ FSR++ER+FGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDS+LLVFANKQDLP AM+AAEMTDKLGL LRHRQW+IQACCAT+GDGLYEGLDWLSA LQK+K Sbjct: 1 MGMAFSRVFERLFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSVLLVFANKQDLPNAMSAAEMTDKLGLHGLRHRQWFIQACCATTGDGLYEGLDWLSATLQKQK 181
BLAST of NO08G03280 vs. NCBI_GenBank
Match: XP_002900890.1 (ADP-ribosylation factor family [Phytophthora infestans T30-4] >XP_024583828.1 adp-ribosylation factor [Plasmopara halstedii] >EEY59697.1 ADP-ribosylation factor family [Phytophthora infestans T30-4] >ETI36242.1 ADP-ribosylation factor 1 [Phytophthora parasitica P1569] >CEG47459.1 adp-ribosylation factor [Plasmopara halstedii] >KUF72077.1 ADP-ribosylation factor [Phytophthora nicotianae] >KUF97247.1 DnaJ subfamily C member 7 [Phytophthora nicotianae] >OWZ15702.1 ADP-ribosylation factor protein [Phytophthora megakarya]) HSP 1 Score: 350.1 bits (897), Expect = 4.000e-93 Identity = 167/181 (92.27%), Postives = 175/181 (96.69%), Query Frame = 0 Query: 1 MGLTFSRIWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSILLVFANKQDLPQAMNAAEMTDKLGLSSLRHRQWYIQACCATSGDGLYEGLDWLSAALQKRK 182 MG+ FSR++ER+FGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDS+LLVFANKQDLP AM+AAEMTDKLGL LRHRQW+IQACCAT+GDGLYEGLDWLSA LQK K Sbjct: 1 MGMAFSRVFERLFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSVLLVFANKQDLPNAMSAAEMTDKLGLHGLRHRQWFIQACCATTGDGLYEGLDWLSATLQKAK 181
BLAST of NO08G03280 vs. NCBI_GenBank
Match: GAX95948.1 (ADP-ribosylation factor [Pythium insidiosum]) HSP 1 Score: 349.0 bits (894), Expect = 9.000e-93 Identity = 166/181 (91.71%), Postives = 175/181 (96.69%), Query Frame = 0 Query: 1 MGLTFSRIWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSILLVFANKQDLPQAMNAAEMTDKLGLSSLRHRQWYIQACCATSGDGLYEGLDWLSAALQKRK 182 MG+ FSR++ER+FGK+EMRI MVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDS+LLVFANKQDLP AM+AAEMTDKLGL LRHRQW+IQACCAT+GDGLYEGLDWLSA LQKRK Sbjct: 1 MGMAFSRVFERLFGKQEMRIXMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSVLLVFANKQDLPNAMSAAEMTDKLGLHGLRHRQWFIQACCATTGDGLYEGLDWLSATLQKRK 181
BLAST of NO08G03280 vs. NCBI_GenBank
Match: XP_002177519.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51982.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 345.9 bits (886), Expect = 7.600e-92 Identity = 167/182 (91.76%), Postives = 174/182 (95.60%), Query Frame = 0 Query: 1 MGLTFSRIWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSILLVFANKQDLPQAMNAAEMTDKLGLSSLR--HRQWYIQACCATSGDGLYEGLDWLSAALQKR 181 MGLTFSR+WERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSND DR+DAARDELHRMLNEDELRD++LLVFANKQDLP AM+AAEMTDKLGL LR +RQWYIQACCAT+GDGLYEGLDWLSA L KR Sbjct: 1 MGLTFSRVWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDSDRIDAARDELHRMLNEDELRDAVLLVFANKQDLPNAMSAAEMTDKLGLHGLRPSYRQWYIQACCATTGDGLYEGLDWLSATLVKR 182 The following BLAST results are available for this feature:
BLAST of NO08G03280 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G03280 ID=NO08G03280|Name=NO08G03280|organism=Nannochloropsis oceanica|type=gene|length=3326bpback to top protein sequence of NO08G03280.1 >NO08G03280.1-protein ID=NO08G03280.1-protein|Name=NO08G03280.1|organism=Nannochloropsis oceanica|type=polypeptide|length=182bpback to top Synonyms
Publications
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