jgi.p|Nanoce1779_2|369417, gene_3655 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|369417
Unique Namegene_3655
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_6:882023..883847 +

Link to JBrowse

Properties
Property NameValue
TranscriptId369503
ProteinId369417
Product nameGlycosyltransferase family 28 C-terminal domain-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_6supercontigscaffold_6:882023..883847 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004577N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase activity
GO:0016758transferase activity, transferring hexosyl groups
GO:0030246carbohydrate binding
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0030259lipid glycosylation
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL083ncniL083Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G03270NO08G03270Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|369417mRNA_3655-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|369417mRNA_3655Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|369417

>mRNA_3655-protein ID=mRNA_3655-protein|Name=jgi.p|Nanoce1779_2|369417|organism=Nannochloropsis oceanica|type=polypeptide|length=264bp
METASTAMAKTKKRVAFVTVGTTQFDALIQAMTTTDALTSLALQGFTHLQ
LQIGVSPKPAVGIPAGVDGMEDVGEAEQKGTGTSHLRRRPKRSSGSSSSS
SSSSSNNKGGVSADDDPGVTVAVSWYRYKDSLRADMEAADLIISHAGAGS
VMEALDLGKALLVVVNTGLMDDHQQELARAMEEQGHLVATEPRHLLKSLE
SYHQWHVHIKPRPPPTLNLLPALLDQEMGFVRSGGGVEETNEGQYERLRE
SGGGDDDGSGKVK*
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Synonyms
Publications