NO08G03270, NO08G03270 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G03270 vs. NCBI_GenBank
Match: EWM26786.1 (UDP-N-acetylglucosamine transferase [Nannochloropsis gaditana]) HSP 1 Score: 215.7 bits (548), Expect = 1.700e-52 Identity = 121/220 (55.00%), Postives = 147/220 (66.82%), Query Frame = 0 Query: 11 TKKRVAFVTVGTTQFDALIQAMTTTDALTSLALQGFTHLQLQIGVSPKPAVGIPAGVDGMEDVGEAEQKGTGTSHLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVTVAVSWYRYKDSLRADMEAADLIISHAGAGSVMEALDLGKALLVVVNTGLMDDHQQELARAMEEQGHLVATEPRHLLKSLESYHQWHVHIKPRPPPTLNLLPALLDQEMGF 231 T +++ FVTVGTT+FDALI+A++T DAL LA+QGFT L +QIG SP+P VG AG D + +V + + T L V+VSWYRYKDSLRADMEAADLIISHAGAGSVME L+LGKALLVVVNT LMDDHQQELA AM+++G+LVATEP ++ L++Y QW + RP PT L+PALLDQEMGF Sbjct: 5 TARKLVFVTVGTTRFDALIEAISTPDALECLAVQGFTDLLIQIGASPEPTVGTAAGSDYVREVHDNKDTETKKGVLE--------SRLTSLLRRRVAKRSTSGQIRGNEAVSVSWYRYKDSLRADMEAADLIISHAGAGSVMEGLNLGKALLVVVNTALMDDHQQELAHAMQKKGYLVATEPNGVVGMLQNYDQWQRSLILRPSPTPGLIPALLDQEMGF 216
BLAST of NO08G03270 vs. NCBI_GenBank
Match: XP_021886076.1 (glycosyltransferase family 1 protein [Lobosporangium transversale] >ORZ28391.1 glycosyltransferase family 1 protein [Lobosporangium transversale]) HSP 1 Score: 117.1 bits (292), Expect = 8.400e-23 Identity = 85/218 (38.99%), Postives = 112/218 (51.38%), Query Frame = 0 Query: 14 RVAFVTVGTTQFDALIQAMTTTDALTSLALQGFTHLQLQIGVSPKPAVGIPAGVDGMEDVGEAEQKGTGTSHLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVTVAVSWYRYKDSLRADMEAADLIISHAGAGSVMEALDLGKALLVVVNTGLMDDHQQELARAMEEQGHLVATEP-RHLLKSLESYHQWHVHIKPRPPPTLNLLPALLDQEMGF 231 R FVTVGTT+FD L+ A+++ D L + GFTHL LQ G S P + +P D EA T T+ ++ ++ + Y+YK SL DM ADLIISHAGAGS++EAL L K L+VVVN LMD+HQQEL A+ EQG+LV R L K+L + + + P P P L LD+ +GF Sbjct: 5 RSIFVTVGTTRFDKLVNAISSPDLLQLMHDLGFTHLSLQHGNSIVPTLFLPT-----IDNSEATTTATVTTIVKVE------------------------------SMQIEVYKYKASLHDDMINADLIISHAGAGSILEALRLQKKLIVVVNEDLMDNHQQELGSALHEQGYLVYCNVFRDLGKALRD--KGYESLVPFPAPNAKLFADFLDEHLGF 185
BLAST of NO08G03270 vs. NCBI_GenBank
Match: CBJ31146.1 (beta(1,4)-N-acetylglucosaminyltransferase [Ectocarpus siliculosus]) HSP 1 Score: 112.8 bits (281), Expect = 1.600e-21 Identity = 76/218 (34.86%), Postives = 104/218 (47.71%), Query Frame = 0 Query: 17 FVTVGTTQFDALIQAMTTTDALTSLALQGFTHLQLQIGVSPKPAVGIPAGVDGMEDVGEAEQKGTGTSHLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVTVAVSWYRYKDSLRADMEAADLIISHAGAGSVMEALDLGKALLVVVNTGLMDDHQQELARAMEEQGHLVATEPRHLLKSLESYHQWHVHIKPRPPPTLNLLPALLDQEMGFVRSG 235 FVTVGTT+FD+L+QA+ L+SL +GFT L +QIG + P ++ WYR+K +L DM AD+++SHAGAGSVMEAL LGKAL+VVVN LMD+HQ+ELA A+ ++ +L AT P L +L +P PP A++D+EM + G Sbjct: 6 FVTVGTTKFDSLVQAVDNAVVLSSLCSKGFTSLTVQIG-HGQHVPSFPVDQTALD---------------------------------------------------CRWYRFKQTLHEDMARADVVVSHAGAGSVMEALGLGKALVVVVNRALMDNHQEELADALAQRNYLRATTPEGLAGALVELDDSPSARRPYPPAKPEAFAAIVDEEMRAAQDG 171
BLAST of NO08G03270 vs. NCBI_GenBank
Match: GBG33574.1 (UDP-N-acetylglucosamine transferase subunit ALG13-like [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 111.3 bits (277), Expect = 4.600e-21 Identity = 79/212 (37.26%), Postives = 106/212 (50.00%), Query Frame = 0 Query: 17 FVTVGTTQFDALIQAMTTTDALTSLALQGFTHLQLQIGVSPKPAVGIPAGVDGMEDVGEAEQKGTGTSHLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVTVAVSWYRYKDSLRADMEAADLIISHAGAGSVMEALDLGKALLVVVNTGLMDDHQQELARAMEEQGHLVATEPRHLLKSLESYHQWHVHIKPRPPPTLNLLPALLDQEM 229 FVTVGTT FDAL++A+ + +L +GFT L +QIG +P + +E+ G AE + +YR+K +L DM++A LI+SHAGAGS+ME+L L K L+VVVN LMD+HQ+ELA AME +G L T P ++ L H + PP L PALLDQEM Sbjct: 18 FVTVGTTSFDALVEALDDESVVQALRQRGFTSLTIQIG----RGTYVPKRIGAVEE-GSAEAATQPAA--------------------------------SATFFPCRYYRFKSTLENDMKSAALIVSHAGAGSIMESLRLKKPLVVVVNEDLMDNHQEELAEAMEAKGVLRKTRPADVVALLGDADLDHFEV--YPPRDAGLFPALLDQEM 190
BLAST of NO08G03270 vs. NCBI_GenBank
Match: KIO33457.1 (glycosyltransferase family 1 protein [Tulasnella calospora MUT 4182]) HSP 1 Score: 109.4 bits (272), Expect = 1.700e-20 Identity = 83/230 (36.09%), Postives = 114/230 (49.57%), Query Frame = 0 Query: 8 MAKTKKRVAFVTVGTTQFDALIQAMTTTDALTSLALQGFTHLQLQIGVSPKPAVGIPAGVDGMEDVGEAEQKGTGTSHLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVTVAVSWYRYKDSLRADMEAADLIISHAGAGSVMEALDLGKALLVVVNTGLMDDHQQELARAMEEQGHLVA--TEPRHLLKSL-----ESYHQWHVHIKPRPPPTLNLLPALLDQEMGF 231 M + + AFVTVG+T+FDALIQ + T L + + GFT L +Q G S PA G D D+G G+TV V +++K SL ++E ADL++SHAG+G++++ L GK L+VV N L+D+HQ ELA A+ E+GHLVA EPR L +SL S Q V P PP ++D+EMGF Sbjct: 1 MVPSAVKRAFVTVGSTKFDALIQQVLTDVTLQTFSNNGFTDLVIQAGNSALPASWNLIGEDVRRDIG-------------------------------------------GLTVTV--WKFKTSLSEEIERADLVVSHAGSGTILDTLRAGKRLIVVPNNTLLDNHQTELAEALHERGHLVAATVEPRWLFRSLGEAIASSTTQPGV---PFPPLDSTAFSRIVDEEMGF 182
BLAST of NO08G03270 vs. NCBI_GenBank
Match: XP_016611194.1 (hypothetical protein SPPG_02217 [Spizellomyces punctatus DAOM BR117] >KND03155.1 hypothetical protein SPPG_02217 [Spizellomyces punctatus DAOM BR117]) HSP 1 Score: 109.0 bits (271), Expect = 2.300e-20 Identity = 75/218 (34.40%), Postives = 106/218 (48.62%), Query Frame = 0 Query: 13 KRVAFVTVGTTQFDALIQAMTTTDALTSLALQGFTHLQLQIGVSPKPAVGIPAGVDGMEDVGEAEQKGTGTSHLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVTVAVSWYRYKDSLRADMEAADLIISHAGAGSVMEALDLGKALLVVVNTGLMDDHQQELARAMEEQGHLVATEPRHLLKSLESYHQWHVHIKPRPPPTLNLLPALLDQEMGF 231 +R AF+TVGTT+FDAL++ ++T + L ++ GFT L +Q G SP P + G + V Y +K L AD ++A L+ISHAGAGS++E L LGK LLVVVN GLMD+HQ ELA AM QG L+ T+ +L S++ ++H PT+ + +L +E GF Sbjct: 9 ERSAFITVGTTRFDALVETVSTLEFLNAVHRNGFTRLTIQHGRSPIPLI------------------------------------------------------PPGSPIRVITYDFKPDLNADYQSAALVISHAGAGSILEGLALGKPLLVVVNRGLMDNHQLELATAMARQGVLIWTDVENLTTSIDKGGWENLHRLEESDPTIFI--DILKEEAGF 170
BLAST of NO08G03270 vs. NCBI_GenBank
Match: XP_005093619.1 (PREDICTED: UDP-N-acetylglucosamine transferase subunit ALG13 homolog [Aplysia californica]) HSP 1 Score: 107.5 bits (267), Expect = 6.600e-20 Identity = 77/218 (35.32%), Postives = 107/218 (49.08%), Query Frame = 0 Query: 14 RVAFVTVGTTQFDALIQAMTTTDALTSLALQGFTHLQLQIGVSPKPAVGIPAGVDGMEDVGEAEQKGTGTSHLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVTVAVSWYRYKDSLRADMEAADLIISHAGAGSVMEALDLGKALLVVVNTGLMDDHQQELARAMEEQGHLVATEPRHLLKSLESYHQWHVHIKPRPPPTLNLLPALLDQEMGFV 232 + FVTVGTTQFD+LI+ +T+ +AL +LA G++ L QIG G + E+ + G V+VSW+R K S+ D+ A+DL++SHAGAGSVM+ L LGK +LVVVN LM +HQ ELA + + GHL + L+ SL+S W + P PP + LD +GFV Sbjct: 3 KTIFVTVGTTQFDSLIKKITSEEALETLAALGYSQLTAQIG-------------RGEYEPSESTSRTNGHP-----------------------------------AVSVSWFRLKASIEDDIAASDLVVSHAGAGSVMDCLGLGKPVLVVVNEELMGNHQTELAHKLAKDGHLHFCGVKDLVVSLKSL-DWSC-LTPFPPGEPAKVARFLDSALGFV 170
BLAST of NO08G03270 vs. NCBI_GenBank
Match: XP_003035996.1 (glycosyltransferase family 1 protein [Schizophyllum commune H4-8] >EFJ01094.1 glycosyltransferase family 1 protein [Schizophyllum commune H4-8]) HSP 1 Score: 106.7 bits (265), Expect = 1.100e-19 Identity = 72/216 (33.33%), Postives = 108/216 (50.00%), Query Frame = 0 Query: 15 VAFVTVGTTQFDALIQAMTTTDALTSLALQGFTHLQLQIGVSPKPAVGIPAGVDGMEDVGEAEQKGTGTSHLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVTVAVSWYRYKDSLRADMEAADLIISHAGAGSVMEALDLGKALLVVVNTGLMDDHQQELARAMEEQGHLVATEPRHLLKSLESYHQWHVHIKPRPPPTLNLLPALLDQEMGF 231 +AFVTVG+T+FDAL+QA+ L +L +G+ HL +Q G S + + EA SH + +Y++K SLR D E ADL+ISHAG+G++++ L + K L++V N L+D+HQQELA +E+Q HLVA+ P L + + S+ + P PP + +LD+EMGF Sbjct: 2 LAFVTVGSTKFDALVQAVCNDAVLDALQAKGYNHLVVQAGNST---------FEHSSRLHEAAISVRTRSH----------------------------------GIEQEYYKFKPSLREDYERADLVISHAGSGTILDVLRIPKPLVIVPNPTLLDNHQQELADVLEQQRHLVASTPETLARDIASFDA--TSLVPFPPFDGSRFARILDEEMGF 172
BLAST of NO08G03270 vs. NCBI_GenBank
Match: XP_008907520.1 (hypothetical protein PPTG_13536 [Phytophthora parasitica INRA-310] >ETK83732.1 hypothetical protein L915_11165 [Phytophthora parasitica] >ETL37148.1 hypothetical protein L916_11061 [Phytophthora parasitica] >ETN07144.1 hypothetical protein PPTG_13536 [Phytophthora parasitica INRA-310] >ETP13477.1 hypothetical protein F441_11396 [Phytophthora parasitica CJ01A1] >ETP41555.1 hypothetical protein F442_11365 [Phytophthora parasitica P10297] >KUG01975.1 UDP-N-acetylglucosamine transferase subunit ALG13 [Phytophthora nicotianae]) HSP 1 Score: 105.5 bits (262), Expect = 2.500e-19 Identity = 80/214 (37.38%), Postives = 107/214 (50.00%), Query Frame = 0 Query: 16 AFVTVGTTQFDALIQAMTTTDALTSLALQGFTHLQLQIGVSPKPAVGIPAGVDGMEDVGEAEQKGTGTSHLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVTVAVSWYRYKDSLRADMEAADLIISHAGAGSVMEALDLGKALLVVVNTGLMDDHQQELARAMEEQGHLVATEPRHLLKSLESYHQWHVHIKPRPPPTLNLLPALLDQEMG 230 AFVTVGTT+FDALI A+ T L++L +GFT L++QIG GE + + T G+T +S+YR+ + D+ ADLIISHAGAGS+M+ L L K L+VVVNT LMD+HQ ELA AM +Q +AT + L LE+ W+ ++P PP P L+D MG Sbjct: 3 AFVTVGTTKFDALIVALDTDACLSALVARGFTSLRMQIG------------------HGEHQPRAT----------------------------------FPGLT--LSFYRHDPQYKRDVSEADLIISHAGAGSIMDGLALKKMLVVVVNTALMDNHQAELAEAMADQKFCLATTVQGLHSVLET-GDWN-SLQPYPPLDEQAFPDLVDAVMG 160
BLAST of NO08G03270 vs. NCBI_GenBank
Match: XP_002908025.1 (UDP-N-acetylglucosamine transferase subunit, putative [Phytophthora infestans T30-4] >EEY61108.1 UDP-N-acetylglucosamine transferase subunit, putative [Phytophthora infestans T30-4]) HSP 1 Score: 105.5 bits (262), Expect = 2.500e-19 Identity = 79/214 (36.92%), Postives = 107/214 (50.00%), Query Frame = 0 Query: 16 AFVTVGTTQFDALIQAMTTTDALTSLALQGFTHLQLQIGVSPKPAVGIPAGVDGMEDVGEAEQKGTGTSHLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVTVAVSWYRYKDSLRADMEAADLIISHAGAGSVMEALDLGKALLVVVNTGLMDDHQQELARAMEEQGHLVATEPRHLLKSLESYHQWHVHIKPRPPPTLNLLPALLDQEMG 230 AFVTVGTT+FDALI A+ T L+SL +GFT L++QIG GE + + T G+T +S+YR+ + D+ ADLIISHAGAGS+M+ L L K LLVVVNT LMD+HQ ELA AM +Q + + T + L LE+ W +++P PP P ++D +G Sbjct: 3 AFVTVGTTKFDALIAALDTDACLSSLVARGFTSLRMQIG------------------HGEHQPRAT----------------------------------FPGLT--LSFYRHDPQYKRDVAEADLIISHAGAGSIMDGLALKKKLLVVVNTSLMDNHQAELAEAMADQNYCLQTTVQGLQSMLEA-GDWD-NLQPYPPLDEQAFPDVVDALVG 160 The following BLAST results are available for this feature:
BLAST of NO08G03270 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G03270 ID=NO08G03270|Name=NO08G03270|organism=Nannochloropsis oceanica|type=gene|length=1131bpback to top protein sequence of NO08G03270.1 >NO08G03270.1-protein ID=NO08G03270.1-protein|Name=NO08G03270.1|organism=Nannochloropsis oceanica|type=polypeptide|length=264bpback to top Synonyms
Publications
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