jgi.p|Nanoce1779_2|581706, gene_2816 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|581706
Unique Namegene_2816
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_5:1272971..1274292 +

Link to JBrowse

Properties
Property NameValue
TranscriptId581792
ProteinId581706
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_5supercontigscaffold_5:1272971..1274292 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL071ncniL071Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G04650NO07G04650Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|581706mRNA_2816-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|581706mRNA_2816Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|581706

>mRNA_2816-protein ID=mRNA_2816-protein|Name=jgi.p|Nanoce1779_2|581706|organism=Nannochloropsis oceanica|type=polypeptide|length=256bp
MHSPILCSRPRQEPPIDDPVQKFTIIYSSFVMQVQQREQYLEQQHVLARM
ARRGVNPPDSWTDPHAVALTLAALQQLIETQRQEVEAVKRQSSDVAPATP
SSSSSSSSRTLVTTTPTMRNMRQGVAELAMSFKAYEREIEKLQAKVLEAT
REAEALEALAPPLLAQDGTVVDPLQVLEKVRRKAQRVLAERERIMTREEE
EEAASLRRGEGVSGPLSQEPREEAKRLVARKWMGAAGGGERRTSGCYQYT
EELID*
back to top
Synonyms
Publications