jgi.p|Nanoce1779_2|615959, gene_11275 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|615959
Unique Namegene_11275
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_110:22868..24465 -

Link to JBrowse

Properties
Property NameValue
TranscriptId616045
ProteinId615959
Product namePhosphatidic acid phosphatase type 2/haloperoxidase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_110supercontigscaffold_110:22868..24465 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL080ncniL080Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G03580NO11G03580Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|615959mRNA_11275-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|615959mRNA_11275Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|615959

>mRNA_11275-protein ID=mRNA_11275-protein|Name=jgi.p|Nanoce1779_2|615959|organism=Nannochloropsis oceanica|type=polypeptide|length=246bp
MASVAAMDTRVAAFDNTYFYNTWRPITAIRTGNEGQDMEASSNWEPFRVT
PATPEYPNGHASLGGAMAEVLAEVANSGKDEAPFPLVLTAPDGQRRTYHS
MSQIADDCAVSRVYWGGHWRHTTSPSIALGKQVGQTVIKQFDDKYEATTA
AETLKQQQQQAAAGQEILTSSGDAQVRVQPKMQGQEHVGVLSQQVEPMTK
QPDTLPNVQQPIMEQDTVAEQPHETPEQARRRRKREREGKRFLRA*
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Synonyms
Publications