jgi.p|Nanoce1779_2|405642, gene_10829 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|405642
Unique Namegene_10829
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_72:4998..7347 -

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Properties
Property NameValue
TranscriptId405728
ProteinId405642
Product nameGlycoside hydrolase superfamily
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_72supercontigscaffold_72:4998..7347 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL095ncniL095Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO23G00160NO23G00160Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|405642mRNA_10829-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|405642mRNA_10829Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|405642

>mRNA_10829-protein ID=mRNA_10829-protein|Name=jgi.p|Nanoce1779_2|405642|organism=Nannochloropsis oceanica|type=polypeptide|length=229bp
MEGSIAGLCLLNEPWTTAVGGPVQLDTLKSWLQTTTDAVLATGWKGDVWF
PDGFALDWDGWRDFLTPPEYPRNIFADAHIYMMFDDAVADLDAAGQAQNF
CREDNHYRQQLERAGGVGSGVVVGEYSMDFRKWPTSFPYSNETLTGLQDL
LLVQQHLYNVIGDKRENAAVGGFFWSFKSLGRVDIQTFDQSDLAVDNSFN
NLHSPWSYLSLLTDGVASPNLAKATPPC*
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Synonyms
Publications