jgi.p|Nanoce1779_2|534267, gene_10677 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|534267
Unique Namegene_10677
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_76:17127..18977 -

Link to JBrowse

Properties
Property NameValue
TranscriptId534353
ProteinId534267
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_76supercontigscaffold_76:17127..18977 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000287magnesium ion binding
GO:0016836hydro-lyase activity
Vocabulary: Biological Process
TermDefinition
GO:0009234menaquinone biosynthetic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL098ncniL098Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO06G01180NO06G01180Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|534267mRNA_10677-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|534267mRNA_10677Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|534267

>mRNA_10677-protein ID=mRNA_10677-protein|Name=jgi.p|Nanoce1779_2|534267|organism=Nannochloropsis oceanica|type=polypeptide|length=604bp
MMQRRRGALARSEDPGGLVRSLLGMSVAQQPSMWEWVRAGTLPTLVVYGV
NDQKYSGLAEELRGGLLGDGGREGGREGLGGGGMGRVVEVKGINDSGHAV
LVEKEGEMLRETTAFLRRHFEDPQGGERVKGTGTGGGGGGGKTKGGASVS
VVSLAVASSSSSLQQQHVLRVASLRWTAFALPLKKPLVLSSGPPLTHRRG
LLLALEADSGVIGVGEVNPLPGFSKETLPQAERQLKALASSLRGRALPKV
GGSRGLAAWMEWLQQQGQGDGLLPSVRAGVEMALVHVLAQEYRVGLPAVL
TAGNPFHLLHTGQVFMNGLVLRSSSSFNSSGGGSRKVKVGGRPVSEDIER
VDIMTAALASGHRLRLDANRSWSLEEATAFIRGLAQPERVEYLEEPCRDP
LIIPELYHLTEQRIKFALDETLASPPRPLSDLVGLAGLVALVLKPTVLGG
LKVCLDLHALGSAKGLLSVVSSSFESSVGLAHLTVLASVLNSGVGTSRQN
KTGGVHTLHGLSTYDVFAREEGEEEEEGREIGRDGYGRLVICGSRSMLVD
VLGCNEFLDGCMKKMKHDGRWCDDRRSVGKEEENAAPERAGREISNGKRN
DPP*
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Synonyms
Publications