jgi.p|Nanoce1779_2|611908, gene_10306 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|611908
Unique Namegene_10306
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_60:35171..36517 +

Link to JBrowse

Properties
Property NameValue
TranscriptId611994
ProteinId611908
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_60supercontigscaffold_60:35171..36517 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL084ncniL084Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G00210NO03G00210Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|611908mRNA_10306-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|611908mRNA_10306Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|611908

>mRNA_10306-protein ID=mRNA_10306-protein|Name=jgi.p|Nanoce1779_2|611908|organism=Nannochloropsis oceanica|type=polypeptide|length=401bp
MPPEAVPSIEKRSRGRPKGSHNKPKDESSTTASSPGTSNQAKPSSRCRKE
VSSITLNALSPSSAYSPPLSASSTPFPSSSSSSSSSPSTSPPPPLSTGNH
SHTADSAVALSGGLKWAMGIIVLILSPRVVGGAVHRLTGGRGGHHPPRAF
HQNTDKNLWANIGRFLTGIGGKAALTTAVASIAVSVSIAPPGTFQLYHTV
GEIPALAFREQRTLVGRVVRVSDGDTIRVRHTPLVPLIGNTPDTGRLTEE
TLIVRLAGIDAPETAKGRGKGQPFAEESKRFVTTNVLDQRVEVKLLSRDQ
YARAVCSVSYGPFSSIPFPFPSFMKKDLSSELLKEGLAVVYRQRGAQYDG
KYREMEMWEAQAKMKRKGIWSKEGEVELPHQYKARTKIEEAERTLTPRGA
*
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Synonyms
Publications