NO03G00210, NO03G00210 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G00210 vs. NCBI_GenBank
Match: EWM29564.1 (nuclease [Nannochloropsis gaditana]) HSP 1 Score: 324.7 bits (831), Expect = 4.000e-85 Identity = 172/294 (58.50%), Postives = 211/294 (71.77%), Query Frame = 0 Query: 113 GLKWALGIIVLILSPRVVGGAVHRLTGGRGGHHPP--RAFHQNTDK-----NLWANIGRFLTGIGGKAALTTAVASIAVSVSIAPPGTFQLYHTVGEIPALAFREQRTLVGRVVRVSDGDTIRVRHTPLVPLIGNTPDTGRLTEETLIVRLAGIDAPETAKGRGKGQPFAEESKRFVTTNVLDQRVEVKLLSRDQYARAVCSVSYGPFSSIPFPFPSFMKKDLSSELLKEGLAVVYRQRGAQYDGKYREMEMWEAQAKMKRKGIWSKEGEVELPHQYKARTKIEEAERTLTPRG 400 G KWALG+I+L L PRV + + P RAF + K ++ A RFL G KAA+ AVAS+A+ VS++PPGTFQ YHTVGEIP FR Q LVG+VVRV DGDT+R+RHTPL PL+ N P +GRL+EETLI+RLAGIDAPE KG+ +GQ AEE+K FVT VLDQ V +KLL RDQYARA+ SV+YGP +SIPFP PSF+KKDLS++L+KEG AV+YRQ+GA YDGK +E +EA AK KRKG+W +VELPHQ+KAR K AE+TL P+G Sbjct: 124 GQKWALGMILLTLLPRVARKTLLSIASSIPKMQQPSVRAFREGPAKSVNFNSMGARWRRFLQGTKAKAAMAAAVASLALGVSLSPPGTFQRYHTVGEIPGRVFRAQTVLVGKVVRVMDGDTLRIRHTPLFPLLNNHPGSGRLSEETLIIRLAGIDAPELGKGKKQGQAGAEEAKSFVTKKVLDQSVRIKLLGRDQYARAIASVAYGPVASIPFPLPSFLKKDLSTDLVKEGFAVIYRQKGAHYDGKLGTLERYEAWAKAKRKGVWHGR-DVELPHQFKARMKKAAAEKTLAPKG 416
BLAST of NO03G00210 vs. NCBI_GenBank
Match: XP_005855829.1 (nuclease domain containing protein, partial [Nannochloropsis gaditana CCMP526] >EKU20530.1 nuclease domain containing protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 172.2 bits (435), Expect = 3.300e-39 Identity = 85/134 (63.43%), Postives = 105/134 (78.36%), Query Frame = 0 Query: 266 KGRGKGQPFAEESKRFVTTNVLDQRVEVKLLSRDQYARAVCSVSYGPFSSIPFPFPSFMKKDLSSELLKEGLAVVYRQRGAQYDGKYREMEMWEAQAKMKRKGIWSKEGEVELPHQYKARTKIEEAERTLTPRG 400 KG+ +GQ AEE+K FVT VLDQ V +KLL RDQYARA+ SV+YGP +SIPFP PSF+KKDLS++L+KEG AV+YRQ+GA YDGK +E +EA AK KRKG+W +VELPHQ+KAR K AE+TL P+G Sbjct: 2 KGKKQGQAGAEEAKSFVTKKVLDQSVRIKLLGRDQYARAIASVAYGPVASIPFPLPSFLKKDLSTDLVKEGFAVIYRQKGAHYDGKLGTLERYEAWAKAKRKGVWHGR-DVELPHQFKARMKKAAAEKTLAPKG 134
BLAST of NO03G00210 vs. NCBI_GenBank
Match: XP_008611794.1 (hypothetical protein SDRG_07720 [Saprolegnia diclina VS20] >EQC34922.1 hypothetical protein SDRG_07720 [Saprolegnia diclina VS20]) HSP 1 Score: 158.7 bits (400), Expect = 3.800e-35 Identity = 90/199 (45.23%), Postives = 123/199 (61.81%), Query Frame = 0 Query: 194 FQLYHTVGEIPALAFREQRTLVGRVVRVSDGDTIRVRHTPLVPLIGNTPDTGRLTEETLIVRLAGIDAPETAKGRGKGQPFAEESKRFVTTNVLDQRVEVKLLSRDQYARAVCSVSY--GPFSSIPFPFPSFMKKDLSSELLKEGLAVVYRQRGAQYDGKYREMEMWEAQAKMKRKGIWSKEGEVELPHQYKARTKIEE 391 F + TV +IP F++QR + + + SDGDT+RVRH PL +G P G+L+E+TL +RL ID PETAK +GQPF +E+K +T + ++++ + LL +DQYARAVC V Y GPF KKD S ELLK GLA VYRQ GA Y GK + EA+AK K+ +WS+ + E +YKAR + E+ Sbjct: 65 FTRFATVEDIPNFMFQQQRKIKAKAINFSDGDTLRVRHLPLFRGLG--PMDGKLSEQTLQIRLCAIDTPETAKFGNQGQPFGDEAKAHLTKLLENRKLTLTLLQKDQYARAVCLVEYGWGPF-----------KKDASEELLKMGLANVYRQTGAVYGGKQATYDKLEAKAKAKKLKMWSQGDDFETTSEYKARIRAEK 250
BLAST of NO03G00210 vs. NCBI_GenBank
Match: XP_008609340.1 (hypothetical protein SDRG_05404 [Saprolegnia diclina VS20] >EQC37178.1 hypothetical protein SDRG_05404 [Saprolegnia diclina VS20]) HSP 1 Score: 158.7 bits (400), Expect = 3.800e-35 Identity = 93/192 (48.44%), Postives = 122/192 (63.54%), Query Frame = 0 Query: 194 FQLYHTVGEIPALAFREQRTLVGRVVRVSDGDTIRVRHTPLVPLIGNTPDTGRLTEETLIVRLAGIDAPETAKGRGKGQPFAEESKRFVTTNVLDQRVEVKLLSRDQYARAVCSVSYGPFSSIPFPFPSFMKKDLSSELLKEGLAVVYRQRGAQYDGKYREMEMWEAQAKMKRKGIWSKEGEVELPHQYKAR 386 FQ + TV +IP F ++RTL G+VV V+DGDTIRVRH P + G+ G+LTE TL +R+AG+D PETAK GQPF EE+K ++ + DQ V KLL +DQY+RAVC V YG ++S ++S ELL++G A +YRQ GA Y G E EA+A+ KR IWS + + E P QYKAR Sbjct: 30 FQRFSTVNDIPKEFFEQERTLRGKVVSVTDGDTIRVRHMPWL-ANGDGDFKGKLTETTLQLRVAGVDCPETAKFGRTGQPFGEEAKAWLKGELQDQVVSFKLLMKDQYSRAVCMVYYGSWAS---------PTNVSEELLRQGYANIYRQSGAVYGGLLETFEALEAEAREKRVHIWSLD-KRETPAQYKAR 210
BLAST of NO03G00210 vs. NCBI_GenBank
Match: XP_012198618.1 (hypothetical protein SPRG_04830 [Saprolegnia parasitica CBS 223.65] >KDO30927.1 hypothetical protein SPRG_04830 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 158.7 bits (400), Expect = 3.800e-35 Identity = 91/199 (45.73%), Postives = 122/199 (61.31%), Query Frame = 0 Query: 194 FQLYHTVGEIPALAFREQRTLVGRVVRVSDGDTIRVRHTPLVPLIGNTPDTGRLTEETLIVRLAGIDAPETAKGRGKGQPFAEESKRFVTTNVLDQRVEVKLLSRDQYARAVCSVSY--GPFSSIPFPFPSFMKKDLSSELLKEGLAVVYRQRGAQYDGKYREMEMWEAQAKMKRKGIWSKEGEVELPHQYKARTKIEE 391 F + TV +IP F+EQR + + + SDGDT+RVRH PL +G P G+L+E+TL +RL ID PETAK +GQPF +E+K +T + ++++ + LL +DQYARAVC V Y GPF KKD S ELLK GLA VYRQ GA Y GK + EA+AK K+ +WS+ + E YKAR + E+ Sbjct: 65 FTRFATVEDIPNFMFQEQRKIKAKAINFSDGDTLRVRHLPLFRGLG--PMDGKLSEQTLQIRLCAIDTPETAKFGNQGQPFGDEAKAHLTKLLENRKLTLTLLQKDQYARAVCLVEYGWGPF-----------KKDASEELLKVGLANVYRQTGAVYGGKQATYDKLEAKAKAKKLKMWSQGDDFETTSAYKARIRAEK 250
BLAST of NO03G00210 vs. NCBI_GenBank
Match: OQR93424.1 (hypothetical protein ACHHYP_02548 [Achlya hypogyna]) HSP 1 Score: 158.7 bits (400), Expect = 3.800e-35 Identity = 92/194 (47.42%), Postives = 123/194 (63.40%), Query Frame = 0 Query: 194 FQLYHTVGEIPALAFREQRTLVGRVVRVSDGDTIRVRHTPLVPLIGNTPDTGRLTEETLIVRLAGIDAPETAKGRGKGQPFAEESKRFVTTNVLDQRVEVKLLSRDQYARAVCSVSYGPFSSIPFPFPSFMKKDLSSELLKEGLAVVYRQRGAQYDGKYREMEMWEAQAKMKRKGIWSKEGEVELPHQYKARTK 388 F++ TV +IP F ++RTL G+VV V+DGDTIRVRH PL+ G G+LTE T+ +R+AG+D PETAK GQPF EE+K ++ + + DQ V KLL +DQY+RAVC V YG ++S +++S ELLK G A +YRQ GA Y G E EA A ++ IWS + + E P QYKART+ Sbjct: 30 FKVLATVNDIPKEYFEQERTLKGKVVAVTDGDTIRVRHMPLLG-SGEGDFKGKLTETTMQLRIAGVDCPETAKFGRPGQPFGEEAKAWLKSQIQDQVVTFKLLMKDQYSRAVCMVYYGSWAS---------PQNVSEELLKLGYANIYRQSGAVYGGLLETFEALEAAACEQKLNIWS-QAKRETPAQYKARTR 212
BLAST of NO03G00210 vs. NCBI_GenBank
Match: OQR97285.1 (hypothetical protein THRCLA_21961 [Thraustotheca clavata]) HSP 1 Score: 158.7 bits (400), Expect = 3.800e-35 Identity = 88/192 (45.83%), Postives = 122/192 (63.54%), Query Frame = 0 Query: 194 FQLYHTVGEIPALAFREQRTLVGRVVRVSDGDTIRVRHTPLVPLIGNTPDTGRLTEETLIVRLAGIDAPETAKGRGKGQPFAEESKRFVTTNVLDQRVEVKLLSRDQYARAVCSVSYGPFSSIPFPFPSFMKKDLSSELLKEGLAVVYRQRGAQYDGKYREMEMWEAQAKMKRKGIWSKEGEVELPHQYKAR 386 F+ ++TV +IP F E++T+ G+V+ V+DGDTIRVRH P + G+ G+LTE TL +R+AG+DAPETAK GQPF E++K+++ + DQ V +KLL +DQY RAVC V YG ++S K+ S ELLK G A +YRQ GA Y G + E E +A+ + IWS + E P +YKAR Sbjct: 29 FKRFNTVNDIPKEYFDEEQTIRGKVITVTDGDTIRVRHVPWL-ANGDGDFKGKLTETTLQIRIAGVDAPETAKFGRTGQPFGEDAKQWLKDELFDQIVSIKLLMKDQYGRAVCMVYYGSWAS---------PKNASEELLKAGYANIYRQSGAVYGGLLDKFEALEDEARKNKVKIWSLGDKRETPAEYKAR 210
BLAST of NO03G00210 vs. NCBI_GenBank
Match: OQS00371.1 (hypothetical protein THRCLA_05975 [Thraustotheca clavata]) HSP 1 Score: 158.3 bits (399), Expect = 5.000e-35 Identity = 101/239 (42.26%), Postives = 138/239 (57.74%), Query Frame = 0 Query: 155 DKNLWANIGRFLTGIGGKAALTTAVASIAVSVSIAPPGTFQLYHTVGEIPALAFREQRTLVGRVVRVSDGDTIRVRHTPLVPLIGNTPDTGRLTEETLIVRLAGIDAPETAKGRGKGQPFAEESKRFVTTNVLDQRVEVKLLSRDQYARAVCSVSY--GPFSSIPFPFPSFMKKDLSSELLKEGLAVVYRQRGAQYDGKYREMEMWEAQAKMKRKGIWSKEGEVELPHQYKARTKIEEA 392 DKN+ IG F G+ V +A+ AP FQ + TV EIP F+EQR + + + VSDGDT+RVRH P + GN G+L+E T+ +RL ID PET K +GQPF +E+K ++T + D+++ + LL +DQYARAVC V Y GPF KKD S ELLK GLA VYRQ GA Y GK + E +AK ++ +WS+ + E +YKAR + E++ Sbjct: 34 DKNVQL-IGAFTFGL---------VLGLAIPKVRAP---FQRFSTVEEIPNFMFQEQRKIRAKAISVSDGDTLRVRHLPFLRGPGNM--DGKLSETTMQIRLCAIDTPETPKFGNQGQPFGDEAKEYLTKILGDRKLMLTLLQKDQYARAVCLVEYGWGPF-----------KKDASEELLKAGLANVYRQTGAVYGGKQSVYDKLEERAKNQKLKMWSQGDKFETTSEYKARIRSEKS 246
BLAST of NO03G00210 vs. NCBI_GenBank
Match: CBJ30876.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 157.9 bits (398), Expect = 6.500e-35 Identity = 95/216 (43.98%), Postives = 128/216 (59.26%), Query Frame = 0 Query: 174 ALTTAVASIAVSVSIAPPGTFQLYHTVGEIPALAFREQRTLVGRVVRVSDGDTIRVRHTPLVPL-IGNTPDTGRL-TEETLIVRLAGIDAPETAKGRGKGQPFAEESKRFVTTNVLDQRVEVKLLSRDQYARAVCSVSYGPFSSIPFPFPSFMKKDLSSELLKEGLAVVYRQRGAQYDGKYREMEMWEAQAKMKRKGIWSKEGEVELPHQYKARTK 388 A+ TA +S +LY TV +IP F+ +L G VV VSDGD+IRVRH P +PL + N TG+ +E+TL +RL +D PE A QPF+ E+K F + + V++KLLS DQY RAVC V YG +PF +KD+S+ELLK GL VVYRQ GA+YD + + +E AK +++G+WS+ E P QYKAR K Sbjct: 64 AIFTAGMLFGCCISSPVSANIRLYRTVPDIPKSMFKNHASLNGNVVTVSDGDSIRVRHKPNIPLPLPNRDMTGKKNSEQTLQIRLYAVDCPEVAHFGNPAQPFSAEAKAFTKEALQGKPVKIKLLSMDQYNRAVCRVQYG-----KWPF----RKDISAELLKNGLGVVYRQGGAEYDSREESLTEYEKSAKSRKEGVWSRSNG-ETPAQYKARIK 269
BLAST of NO03G00210 vs. NCBI_GenBank
Match: XP_012197543.1 (hypothetical protein SPRG_03573 [Saprolegnia parasitica CBS 223.65] >KDO31653.1 hypothetical protein SPRG_03573 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 156.8 bits (395), Expect = 1.400e-34 Identity = 92/192 (47.92%), Postives = 120/192 (62.50%), Query Frame = 0 Query: 194 FQLYHTVGEIPALAFREQRTLVGRVVRVSDGDTIRVRHTPLVPLIGNTPDTGRLTEETLIVRLAGIDAPETAKGRGKGQPFAEESKRFVTTNVLDQRVEVKLLSRDQYARAVCSVSYGPFSSIPFPFPSFMKKDLSSELLKEGLAVVYRQRGAQYDGKYREMEMWEAQAKMKRKGIWSKEGEVELPHQYKAR 386 FQ + TV +IP F +RTL G+VV V+DGDTIRVRH P + G+ G+LTE TL +R+AG+D PETAK GQPF EE+K ++ + DQ V KLL +DQY+RAVC V YG +++ ++S ELL+ G A +YRQ GA Y G E EA+A+ KR IWS + + E P QYKAR Sbjct: 30 FQRFSTVNDIPKEFFEHERTLRGKVVSVTDGDTIRVRHVPWL-ANGDGDFKGKLTETTLQLRVAGVDCPETAKFGRTGQPFGEEAKAWLKGELQDQVVSFKLLMKDQYSRAVCLVYYGSWAA---------PMNVSEELLRHGYANIYRQSGAVYGGLLETFEALEAEAREKRVNIWSLD-KRETPAQYKAR 210 The following BLAST results are available for this feature:
BLAST of NO03G00210 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G00210 ID=NO03G00210|Name=NO03G00210|organism=Nannochloropsis oceanica|type=gene|length=1203bpback to top protein sequence of NO03G00210.1 >NO03G00210.1-protein ID=NO03G00210.1-protein|Name=NO03G00210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=401bpback to top Synonyms
Publications
|