jgi.p|Nanoce1779_2|609811, gene_10258 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|609811
Unique Namegene_10258
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_47:40531..42710 -

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Properties
Property NameValue
TranscriptId609897
ProteinId609811
Product nameriboflavin biosynthesis protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_47supercontigscaffold_47:40531..42710 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:00087035-amino-6-(5-phosphoribosylamino)uracil reductase activity
Vocabulary: Biological Process
TermDefinition
GO:0009231riboflavin biosynthetic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL067ncniL067Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G00310NO11G00310Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|609811mRNA_10258-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|609811mRNA_10258Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|609811

>mRNA_10258-protein ID=mRNA_10258-protein|Name=jgi.p|Nanoce1779_2|609811|organism=Nannochloropsis oceanica|type=polypeptide|length=258bp
MEGLGTYFCSGVKKRAAAERPLVTIKLAIDQNGAVDDKTLKPARFTCDAS
LDAVHRLRRDAEAVLVGVETVVRDDPSLTVRRVPLRADQRQPIRVVLDRS
LRIPYSSTLLNDRHRTLVYYVQGPWRHMRAADIMLSKFGSPVLIDCIYES
ELKPNDAAPLQEILGRLYDMGVRKHVMVEGGPRTAKAFLDAACADRAVIY
QAPIAFNGEPVMSGIQSEDLEKAGLAYLGSYPSGVDTVHCWSRPTVPWPT
EELSAWP*
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Synonyms
Publications