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Properties
| Property Name | Value |
|---|
| TranscriptId | 609897 |
| Track | FilteredModels2 |
| ProteinId | 609811 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_47 | supercontig | scaffold_47:40531..42710 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10258 ID=mRNA_10258|Name=jgi.p|Nanoce1779_2|609811|organism=Nannochloropsis oceanica|type=mRNA|length=1014bp
AGCAGCAGCAGCAGCAGCAGCAGCGGCGGCTGGGTGCTGCGGTCGGCATA
CAAAGCGGTCTTGGTGTCCAGGGTGGAGGTGCTCTAGGTGGAGGCCGCGA
GGGAGTCTTTGTCCCGTCTACAGGAAGCCTCTTCCTTCCCGGTTTCGACC
CCCAAGCAGAAATGGAAGGTCTAGGCACCTACTTCTGCTCGGGCGTCAAG
AAGCGGGCGGCGGCAGAACGGCCACTCGTCACCATCAAGCTTGCCATCGA
CCAAAACGGGGCTGTAGACGACAAAACCCTCAAGCCCGCCCGATTTACCT
GCGACGCTTCCCTGGATGCCGTCCATCGACTGAGGAGGGACGCAGAAGCC
GTGCTCGTGGGAGTGGAAACAGTCGTGAGAGACGACCCTTCCCTCACCGT
CCGTCGTGTCCCCCTCCGTGCCGACCAGCGCCAGCCCATCCGCGTCGTCC
TCGACAGGAGCCTGCGGATACCGTACTCCTCCACATTACTGAATGACAGG
CACCGGACACTTGTCTATTATGTGCAAGGACCCTGGCGCCACATGCGTGC
CGCGGACATTATGCTGTCCAAGTTCGGATCCCCTGTGTTAATTGATTGCA
TTTATGAGTCGGAGCTCAAACCCAACGACGCGGCGCCTCTTCAAGAGATT
TTGGGACGTCTCTACGACATGGGCGTAAGGAAGCATGTGATGGTGGAGGG
CGGGCCACGCACAGCCAAGGCCTTCCTGGACGCTGCCTGTGCAGATAGAG
CAGTCATATATCAAGCCCCTATAGCGTTTAATGGCGAGCCTGTCATGTCA
GGAATTCAAAGCGAGGATCTCGAAAAGGCCGGGCTGGCGTATCTGGGTTC
CTATCCTTCGGGAGTCGATACGGTGCACTGCTGGTCGCGCCCGACCGTCC
CCTGGCCCACGGAGGAGCTTTCTGCCTGGCCGTAGAGAGGGAGGGAGGGA
GGGAGGGAGGGAGCTGTGGAAAGCTGAAAGCTCTGTTCGACCCTTGCCGG
AGAGAGGAAGGGAT back to topprotein sequence of jgi.p|Nanoce1779_2|609811 >mRNA_10258-protein ID=mRNA_10258-protein|Name=jgi.p|Nanoce1779_2|609811|organism=Nannochloropsis oceanica|type=polypeptide|length=258bp
MEGLGTYFCSGVKKRAAAERPLVTIKLAIDQNGAVDDKTLKPARFTCDAS
LDAVHRLRRDAEAVLVGVETVVRDDPSLTVRRVPLRADQRQPIRVVLDRS
LRIPYSSTLLNDRHRTLVYYVQGPWRHMRAADIMLSKFGSPVLIDCIYES
ELKPNDAAPLQEILGRLYDMGVRKHVMVEGGPRTAKAFLDAACADRAVIY
QAPIAFNGEPVMSGIQSEDLEKAGLAYLGSYPSGVDTVHCWSRPTVPWPT
EELSAWP* back to topmRNA from alignment at scaffold_47:40531..42710- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10258 ID=mRNA_10258|Name=jgi.p|Nanoce1779_2|609811|organism=Nannochloropsis oceanica|type=mRNA|length=2180bp|location=Sequence derived from alignment at scaffold_47:40531..42710- (Nannochloropsis oceanica)
AGCAGCAGCAGCAGCAGCAGCAGCGGCGGCTGGGTGCTGCGGTCGGCATA
CAAAGCGGTCTTGGTGTCCAGGGTGGAGGTGCTCTAGGTGGAGGCCGCGA
GGGAGTCTTTGTCCCGTCTACAGGAAGCCTCTTCCTTCCCGGTTTCGACC
CCCAAGCAGGTGAGAGAGGAGGAAGACGAAGGAGGGAGGGAGGGAGGGAG
GGAGGGAGGGAGGGAGGGAAGGATGCACACACGACGATGCAGATGCAACT
CCACAATATTCACTCATTTTCATTTCTTCCTTCTTTCCCTTCCCTACTCC
CTTCTAGAAATGGAAGGTCTAGGCACCTACTTCTGCTCGGGCGTCAAGAA
GCGGGCGGCGGCAGAACGGCCACTCGTCACCATCAAGCTTGCCATCGACC
AGTAAGGACGGAGGGCAGGACGGAGGGCGGGATGGAGGGAGTGGGGAGTG
ACGTGTCAGATTTTTCTCCAGTCCTGATTCTGACTTGGCTCCCCCCTTAT
TCCCTCCTTCCCTCCCTCAGGAAGGTTGTTGTGGATGACATGGCACTTGC
ACCCCTTGCATGTCACCCCTCCCACCCACCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTTCCTCCCACAGAAACGGGGCTGTAGACGACAA
AACCCTCAAGCCCGCCCGATTTACCTGCGACGCTTCCCTGGATGCCGTCC
ATCGACTGAGGAGGGACGCAGAAGCCGTGCTCGTGGGAGTGGAAACAGTC
GTGAGAGACGACCCTTCCCTCACCGTACGTCCTCCCTCCCTCCCTCCCTC
CCTCCCTCTCTGCCTGCCTGCCTGTGTGACTTTCTTTCTTTCTTTCTTTC
TTTGGATGGGGAGTTGAAGAGCGTTGTATGCCTTTCATTCCACACATTCA
TTCCCAGCTCACTTTCTTCTTGTATCCCTCCCCTCCCTCCCTCCCTCCCT
CCCTCCTTTCTTTCCAGGTCCGTCGTGTCCCCCTCCGTGCCGACCAGCGC
CAGCCCATCCGCGTCGTCCTCGACAGGAGCCTGCGGATACCGTACTCCTC
CACATTACTGAATGACAGGCACCGGACACTTGTCTATTATGTGCAAGGAC
CGTGAGTCCTTCCCCCCTCCCTCCCTCCCTCCCTCCCTCCCTACCTCCCT
CCCTACCTCCTTCCCCCCATCTCTACTTGATTATAATTCTTGAGCTTGCA
GATTCATCATCCTTCTCTCTTTCTCCCTCCCTCCCTTCTTCCCAACCTCC
CTGCATCCCTCAGCTGGCGCCACATGCGTGCCGCGGACATTATGCTGTCC
AAGTTCGGATCCCCTGTGTTAATTGATTGCATTTATGAGTCGGAGCTCAA
ACCCAACGACGGTGAGGAGGGAGGGAAGGAGGGAGGGAAGGAGGGAGGGA
AGGAGGGAGGGAAGGAGGGAGTAAGCGACATTGCGTGGCACATACTTACC
TACCTTCCGATCCGCCGACCCTCTCTCCCTCCCTCCCTCACTCTCTCCCT
CCCAGCGGCGCCTCTTCAAGAGATTTTGGGACGTCTCTACGACATGGGCG
TAAGGAAGCATGTGATGGTGGAGGGCGGGCCACGCACAGCCAAGGCAAGG
CATCCCTCCCTACCTCCCTCTCTTTTACGTCATATCCAACCCACCAATAG
AAAGAGAGCACTTTAGAAGCCTATAATTGATATCCTTTGCTTCCGGCCAA
ACGAATTCTCCCTCCCTCCCTCCCTCCCTCCCTCCTCCCAGGCCTTCCTG
GACGCTGCCTGTGCAGATAGAGCAGTCATATATCAAGCCCCTATAGCGTT
TAATGGCGAGCCTGTCATGTCAGGAATTCAAAGCGAGGATCTCGAAAAGG
CCGGGCTGGCGTATCTGGGTAGGGAGGGAGGGAGGGAGGGAGGGAGGGAG
GGAGGGAGGGAGGGAAGAAGACACGCGATCGACCCTGATTTTTGAGGAAT
TTCCTTGACTTTTTCTATCTTTCCCTTTCCACCTTCTTCTCTGTGCGTAG
GTTCCTATCCTTCGGGAGTCGATACGGTGCACTGCTGGTCGCGCCCGACC
GTCCCCTGGCCCACGGAGGAGCTTTCTGCCTGGCCGTAGAGAGGGAGGGA
GGGAGGGAGGGAGGGAGGGAGGGAGGGAGCTGTGGAAAGCTGAAAGCTCT
GTTCGACCCTTGCCGGAGAGAGGAAGGGAT back to topCoding sequence (CDS) from alignment at scaffold_47:40531..42710- >mRNA_10258 ID=mRNA_10258|Name=jgi.p|Nanoce1779_2|609811|organism=Nannochloropsis oceanica|type=CDS|length=5418bp|location=Sequence derived from alignment at scaffold_47:40531..42710- (Nannochloropsis oceanica)
GTTCCTATCCTTCGGGAGTCGATACGGTGCACTGCTGGTCGCGCCCGACC
GTCCCCTGGCCCACGGAGGAGCTTTCTGCCTGGCCGTAGGCCTTCCTGGA
CGCTGCCTGTGCAGATAGAGCAGTCATATATCAAGCCCCTATAGCGTTTA
ATGGCGAGCCTGTCATGTCAGGAATTCAAAGCGAGGATCTCGAAAAGGCC
GGGCTGGCGTATCTGGCGGCGCCTCTTCAAGAGATTTTGGGACGTCTCTA
CGACATGGGCGTAAGGAAGCATGTGATGGTGGAGGGCGGGCCACGCACAG
CCAAGCTGGCGCCACATGCGTGCCGCGGACATTATGCTGTCCAAGTTCGG
ATCCCCTGTGTTAATTGATTGCATTTATGAGTCGGAGCTCAAACCCAACG
ACGGTCCGTCGTGTCCCCCTCCGTGCCGACCAGCGCCAGCCCATCCGCGT
CGTCCTCGACAGGAGCCTGCGGATACCGTACTCCTCCACATTACTGAATG
ACAGGCACCGGACACTTGTCTATTATGTGCAAGGACCAAACGGGGCTGTA
GACGACAAAACCCTCAAGCCCGCCCGATTTACCTGCGACGCTTCCCTGGA
TGCCGTCCATCGACTGAGGAGGGACGCAGAAGCCGTGCTCGTGGGAGTGG
AAACAGTCGTGAGAGACGACCCTTCCCTCACCATGGAAGGTCTAGGCACC
TACTTCTGCTCGGGCGTCAAGAAGCGGGCGGCGGCAGAACGGCCACTCGT
CACCATCAAGCTTGCCATCGACCAGTTCCTATCCTTCGGGAGTCGATACG
GTGCACTGCTGGTCGCGCCCGACCGTCCCCTGGCCCACGGAGGAGCTTTC
TGCCTGGCCGTAGGCCTTCCTGGACGCTGCCTGTGCAGATAGAGCAGTCA
TATATCAAGCCCCTATAGCGTTTAATGGCGAGCCTGTCATGTCAGGAATT
CAAAGCGAGGATCTCGAAAAGGCCGGGCTGGCGTATCTGGCGGCGCCTCT
TCAAGAGATTTTGGGACGTCTCTACGACATGGGCGTAAGGAAGCATGTGA
TGGTGGAGGGCGGGCCACGCACAGCCAAGCTGGCGCCACATGCGTGCCGC
GGACATTATGCTGTCCAAGTTCGGATCCCCTGTGTTAATTGATTGCATTT
ATGAGTCGGAGCTCAAACCCAACGACGGTCCGTCGTGTCCCCCTCCGTGC
CGACCAGCGCCAGCCCATCCGCGTCGTCCTCGACAGGAGCCTGCGGATAC
CGTACTCCTCCACATTACTGAATGACAGGCACCGGACACTTGTCTATTAT
GTGCAAGGACCAAACGGGGCTGTAGACGACAAAACCCTCAAGCCCGCCCG
ATTTACCTGCGACGCTTCCCTGGATGCCGTCCATCGACTGAGGAGGGACG
CAGAAGCCGTGCTCGTGGGAGTGGAAACAGTCGTGAGAGACGACCCTTCC
CTCACCATGGAAGGTCTAGGCACCTACTTCTGCTCGGGCGTCAAGAAGCG
GGCGGCGGCAGAACGGCCACTCGTCACCATCAAGCTTGCCATCGACCAGT
TCCTATCCTTCGGGAGTCGATACGGTGCACTGCTGGTCGCGCCCGACCGT
CCCCTGGCCCACGGAGGAGCTTTCTGCCTGGCCGTAGGCCTTCCTGGACG
CTGCCTGTGCAGATAGAGCAGTCATATATCAAGCCCCTATAGCGTTTAAT
GGCGAGCCTGTCATGTCAGGAATTCAAAGCGAGGATCTCGAAAAGGCCGG
GCTGGCGTATCTGGCGGCGCCTCTTCAAGAGATTTTGGGACGTCTCTACG
ACATGGGCGTAAGGAAGCATGTGATGGTGGAGGGCGGGCCACGCACAGCC
AAGCTGGCGCCACATGCGTGCCGCGGACATTATGCTGTCCAAGTTCGGAT
CCCCTGTGTTAATTGATTGCATTTATGAGTCGGAGCTCAAACCCAACGAC
GGTCCGTCGTGTCCCCCTCCGTGCCGACCAGCGCCAGCCCATCCGCGTCG
TCCTCGACAGGAGCCTGCGGATACCGTACTCCTCCACATTACTGAATGAC
AGGCACCGGACACTTGTCTATTATGTGCAAGGACCAAACGGGGCTGTAGA
CGACAAAACCCTCAAGCCCGCCCGATTTACCTGCGACGCTTCCCTGGATG
CCGTCCATCGACTGAGGAGGGACGCAGAAGCCGTGCTCGTGGGAGTGGAA
ACAGTCGTGAGAGACGACCCTTCCCTCACCATGGAAGGTCTAGGCACCTA
CTTCTGCTCGGGCGTCAAGAAGCGGGCGGCGGCAGAACGGCCACTCGTCA
CCATCAAGCTTGCCATCGACCAGTTCCTATCCTTCGGGAGTCGATACGGT
GCACTGCTGGTCGCGCCCGACCGTCCCCTGGCCCACGGAGGAGCTTTCTG
CCTGGCCGTAGGCCTTCCTGGACGCTGCCTGTGCAGATAGAGCAGTCATA
TATCAAGCCCCTATAGCGTTTAATGGCGAGCCTGTCATGTCAGGAATTCA
AAGCGAGGATCTCGAAAAGGCCGGGCTGGCGTATCTGGCGGCGCCTCTTC
AAGAGATTTTGGGACGTCTCTACGACATGGGCGTAAGGAAGCATGTGATG
GTGGAGGGCGGGCCACGCACAGCCAAGCTGGCGCCACATGCGTGCCGCGG
ACATTATGCTGTCCAAGTTCGGATCCCCTGTGTTAATTGATTGCATTTAT
GAGTCGGAGCTCAAACCCAACGACGGTCCGTCGTGTCCCCCTCCGTGCCG
ACCAGCGCCAGCCCATCCGCGTCGTCCTCGACAGGAGCCTGCGGATACCG
TACTCCTCCACATTACTGAATGACAGGCACCGGACACTTGTCTATTATGT
GCAAGGACCAAACGGGGCTGTAGACGACAAAACCCTCAAGCCCGCCCGAT
TTACCTGCGACGCTTCCCTGGATGCCGTCCATCGACTGAGGAGGGACGCA
GAAGCCGTGCTCGTGGGAGTGGAAACAGTCGTGAGAGACGACCCTTCCCT
CACCATGGAAGGTCTAGGCACCTACTTCTGCTCGGGCGTCAAGAAGCGGG
CGGCGGCAGAACGGCCACTCGTCACCATCAAGCTTGCCATCGACCAGTTC
CTATCCTTCGGGAGTCGATACGGTGCACTGCTGGTCGCGCCCGACCGTCC
CCTGGCCCACGGAGGAGCTTTCTGCCTGGCCGTAGGCCTTCCTGGACGCT
GCCTGTGCAGATAGAGCAGTCATATATCAAGCCCCTATAGCGTTTAATGG
CGAGCCTGTCATGTCAGGAATTCAAAGCGAGGATCTCGAAAAGGCCGGGC
TGGCGTATCTGGCGGCGCCTCTTCAAGAGATTTTGGGACGTCTCTACGAC
ATGGGCGTAAGGAAGCATGTGATGGTGGAGGGCGGGCCACGCACAGCCAA
GCTGGCGCCACATGCGTGCCGCGGACATTATGCTGTCCAAGTTCGGATCC
CCTGTGTTAATTGATTGCATTTATGAGTCGGAGCTCAAACCCAACGACGG
TCCGTCGTGTCCCCCTCCGTGCCGACCAGCGCCAGCCCATCCGCGTCGTC
CTCGACAGGAGCCTGCGGATACCGTACTCCTCCACATTACTGAATGACAG
GCACCGGACACTTGTCTATTATGTGCAAGGACCAAACGGGGCTGTAGACG
ACAAAACCCTCAAGCCCGCCCGATTTACCTGCGACGCTTCCCTGGATGCC
GTCCATCGACTGAGGAGGGACGCAGAAGCCGTGCTCGTGGGAGTGGAAAC
AGTCGTGAGAGACGACCCTTCCCTCACCATGGAAGGTCTAGGCACCTACT
TCTGCTCGGGCGTCAAGAAGCGGGCGGCGGCAGAACGGCCACTCGTCACC
ATCAAGCTTGCCATCGACCAGTTCCTATCCTTCGGGAGTCGATACGGTGC
ACTGCTGGTCGCGCCCGACCGTCCCCTGGCCCACGGAGGAGCTTTCTGCC
TGGCCGTAGGCCTTCCTGGACGCTGCCTGTGCAGATAGAGCAGTCATATA
TCAAGCCCCTATAGCGTTTAATGGCGAGCCTGTCATGTCAGGAATTCAAA
GCGAGGATCTCGAAAAGGCCGGGCTGGCGTATCTGGCGGCGCCTCTTCAA
GAGATTTTGGGACGTCTCTACGACATGGGCGTAAGGAAGCATGTGATGGT
GGAGGGCGGGCCACGCACAGCCAAGCTGGCGCCACATGCGTGCCGCGGAC
ATTATGCTGTCCAAGTTCGGATCCCCTGTGTTAATTGATTGCATTTATGA
GTCGGAGCTCAAACCCAACGACGGTCCGTCGTGTCCCCCTCCGTGCCGAC
CAGCGCCAGCCCATCCGCGTCGTCCTCGACAGGAGCCTGCGGATACCGTA
CTCCTCCACATTACTGAATGACAGGCACCGGACACTTGTCTATTATGTGC
AAGGACCAAACGGGGCTGTAGACGACAAAACCCTCAAGCCCGCCCGATTT
ACCTGCGACGCTTCCCTGGATGCCGTCCATCGACTGAGGAGGGACGCAGA
AGCCGTGCTCGTGGGAGTGGAAACAGTCGTGAGAGACGACCCTTCCCTCA
CCATGGAAGGTCTAGGCACCTACTTCTGCTCGGGCGTCAAGAAGCGGGCG
GCGGCAGAACGGCCACTCGTCACCATCAAGCTTGCCATCGACCAGTTCCT
ATCCTTCGGGAGTCGATACGGTGCACTGCTGGTCGCGCCCGACCGTCCCC
TGGCCCACGGAGGAGCTTTCTGCCTGGCCGTAGGCCTTCCTGGACGCTGC
CTGTGCAGATAGAGCAGTCATATATCAAGCCCCTATAGCGTTTAATGGCG
AGCCTGTCATGTCAGGAATTCAAAGCGAGGATCTCGAAAAGGCCGGGCTG
GCGTATCTGGCGGCGCCTCTTCAAGAGATTTTGGGACGTCTCTACGACAT
GGGCGTAAGGAAGCATGTGATGGTGGAGGGCGGGCCACGCACAGCCAAGC
TGGCGCCACATGCGTGCCGCGGACATTATGCTGTCCAAGTTCGGATCCCC
TGTGTTAATTGATTGCATTTATGAGTCGGAGCTCAAACCCAACGACGGTC
CGTCGTGTCCCCCTCCGTGCCGACCAGCGCCAGCCCATCCGCGTCGTCCT
CGACAGGAGCCTGCGGATACCGTACTCCTCCACATTACTGAATGACAGGC
ACCGGACACTTGTCTATTATGTGCAAGGACCAAACGGGGCTGTAGACGAC
AAAACCCTCAAGCCCGCCCGATTTACCTGCGACGCTTCCCTGGATGCCGT
CCATCGACTGAGGAGGGACGCAGAAGCCGTGCTCGTGGGAGTGGAAACAG
TCGTGAGAGACGACCCTTCCCTCACCATGGAAGGTCTAGGCACCTACTTC
TGCTCGGGCGTCAAGAAGCGGGCGGCGGCAGAACGGCCACTCGTCACCAT
CAAGCTTGCCATCGACCA back to top
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