NO11G00310, NO11G00310 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G00310 vs. NCBI_GenBank
Match: CBJ25869.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 194.9 bits (494), Expect = 6.700e-46 Identity = 119/264 (45.08%), Postives = 151/264 (57.20%), Query Frame = 0 Query: 326 PLVTIKLAIDQNGAVDDKTLKPARFTCDASLDAVHRLRRDAEAVLVGVETVVRDDPSLTVRRVPLRADQ-RQPIRVVLDRSLRIPYSS------TLLNDRHRTLVYYVQG-PWRHMRAADIMLS-KFGSPVLIDCIYESE------------------LKPNDAAPLQEILGRLYDMGVRKHVMVEGGPRTAKAFLDAACADRAVIYQAPIAFNGEPVMSGIQSEDLEKAGLAYLGSYPSGVDTVHCWSRPTVPWPTEELSAWP 563 P VT+KLA+D+NGAVDD + P RFT ASLDAVHR+RRD EAVLVGV TVVRDDPSLTVRRVPL Q RQP RVVLDR+LR+ + +L D H +LV+Y G RAA++ K + D E+E +P L +LG L + G+ HV+VEGGP A+ FL DRA+I +AP+ F PV S I ++ L +AGL +G G D CW+RP + WP + +WP Sbjct: 147 PSVTLKLAMDRNGAVDDMSEGPKRFTSPASLDAVHRIRRDCEAVLVGVGTVVRDDPSLTVRRVPLNGGQTRQPTRVVLDRTLRLTGAQAGQNPRAILRDGHSSLVFYSAGCEDTEARAAELKADVKRSRTAVSDSPGETEPDTSHQKLAPVDFVGMPVQRPGAGVDLSGVLGALLERGI-DHVLVEGGPSVARGFLSERLVDRAIIIRAPMEF-VRPVPSDIATDTLRRAGLELVGCTKWGDDEAECWTRPGLGWPGGGVGSWP 408
BLAST of NO11G00310 vs. NCBI_GenBank
Match: CEM06899.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 172.6 bits (436), Expect = 3.600e-39 Identity = 109/305 (35.74%), Postives = 153/305 (50.16%), Query Frame = 0 Query: 321 AAAERPLVTIKLAIDQNGAVDDKTLKPARFTCDASLDAVHRLRRDAEAVLVGVETVVRDDPSLTVRRVPLRADQRQPIRVVLDRSLRIPYSSTLLNDRHRTLVYYVQGPWRHMRAADIMLSKFG------------------SPVLIDCIYESELK----------------------PN----------------------DAAPLQEILGRLYDMGVRKHVMVEGGPRTAKAFLDAACADRAVIYQA-PIAFNGEPVMSGIQSEDLEKAGLAYLGSYPSGVDTVHCWSRPTVPWPTEELSAWP 563 A +RP VT+KLA+D+NGAVDD + P RFTC +LD VHR+R ++ V+VGV T++RDD LTVRRVPL Q QP+RVVLD SLRIP + +L D + T+V+ + A + S+ G S V +D ++ E++ P+ D L + LGR D GV KH MVE GPR +FL DR V+ +A + F G+P+ S + + L++AGL + G D V WSR +PWPT++ ++WP Sbjct: 3 ARLKRPEVTVKLAVDRNGAVDDLKIAPERFTCSEALDKVHRIRLASDCVIVGVNTIIRDDAQLTVRRVPLAPGQSQPLRVVLDPSLRIPKDAQVLTDEYSTVVFCASATDDPLLALNPPPSRRGDLVAPPAFASSRPTLKTKSGVSVDRVWLDEIEEMMEGDQQKRKRWEALFGGQSPPSKILRLIPPATGQFARADRRIGLDLRALLDHLGR--DFGV-KHAMVEAGPRLVDSFLTQGLVDRLVVVRATSVEFQGQPLPSHVTAATLQRAGLQQVARGVWGADEVTYWSRKGIPWPTDDPASWP 304
BLAST of NO11G00310 vs. NCBI_GenBank
Match: PDH26338.1 (riboflavin biosynthesis protein RibD [Marine Group II euryarchaeote MED-G33]) HSP 1 Score: 165.6 bits (418), Expect = 4.400e-37 Identity = 100/239 (41.84%), Postives = 138/239 (57.74%), Query Frame = 0 Query: 324 ERPLVTIKLAIDQNGAVDDKTLKPARFTCDASLDAVHRLRRDAEAVLVGVETVVRDDPSLTVRRVPLRADQRQPIRVVLDRSLRIPYSSTLLNDRHRTLVYYVQGPWRHMRAADIMLSKFGSPVLIDCIYESELKPNDAAPLQEILGRLYDMGVRKHVMVEGGPRTAKAFLDAACADRAVIYQAPIAFNGEPVMSGIQSEDLEKAGLAYLGSYPSGVDTVHCWSRPTVPWPTEELSAWP 563 +RPLVT+K A+D NG VD ++ P RFT + SLDA HR+RR A+A+LVGV T++RD+PSL +RRVP+ + QP+RVVLDR+LRIP +S +L D TL+ + Q R + L G A L +L L D G ++ ++VEGGP+ K F++ DRA+I Q+P GE MSG+ L +AGL + G D V W+R +PWP+ E WP Sbjct: 156 KRPLVTLKAAMDANGVVDGES--PGRFTSEESLDAAHRMRRHADAILVGVNTIIRDNPSLNIRRVPI-GESNQPLRVVLDRTLRIPQNSKVLTDDGDTLLIHTQQDSR-----GVALPADG---------------KGGADLNALLDHLGDRGTQE-LLVEGGPKVWKHFIEEKLVDRAIIIQSPNLL-GEGPMSGLDDSLLIEAGLEMIEQKNWGEDVVTLWTRSNLPWPSGE---WP 366
BLAST of NO11G00310 vs. NCBI_GenBank
Match: XP_002178676.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC50341.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 160.2 bits (404), Expect = 1.800e-35 Identity = 109/280 (38.93%), Postives = 141/280 (50.36%), Query Frame = 0 Query: 298 PGFDPQAEMEGLGTYFCSGVKKRAAAERPLVTIKLAIDQNGAVDDKTLKPA-RFTCDASLDAVHRLRRDAEAVLVGVETVVRDDPSLTVRRVPLRADQRQPIRVVLDRSLRIPYSST-------LLNDRHRTLVYYVQGPWRHMRAADIMLSKFGSPVLIDCIYESELKPN-DAAPLQEILGR------LYDMGVRKHVMVEGGPRTAKAFLDAACADRAVIYQAPIAFNGEPVMSGIQSEDLEKAGLAYLGSYPSGVDTVHCWSRPTVPWPTEELSAWP 563 PGF ++ + K A A VT+K+A+D NGA D+ + RFTC +LD VHRLR ++AVLVG TV D+PSLTVRR P RQP+RVVLD L + T LL D T+VY+ D+ I +Y KP+ D P + L L D H+MVEGGP TA+ FL DR ++ A + F +P+ SG+ + L AGL LG+ P GVD + WSRP +PWPT ELS WP Sbjct: 32 PGFRSSRDVATGCAAAPADAKSDAVAAVTGVTLKVALDANGAAADRAANESLRFTCGEALDMVHRLRCCSDAVLVGRGTVQADNPSLTVRRTPC---DRQPLRVVLDPRLELLRQKTDQGARFALLEDGLTTVVYHT--------VPDLDEDSLNLLETITVVYVPPTKPSGDNVPHGDYLSAATLTRDLRDRFGVNHLMVEGGPLTARQFLYEHQVDRVILVHASLCFR-QPLESGLTEKVLVDAGLEKLGTEPCGVDQIEYWSRPELPWPTTELSKWP 299
BLAST of NO11G00310 vs. NCBI_GenBank
Match: AIF04990.1 (riboflavin biosynthesis protein (ribD) [uncultured marine group II/III euryarchaeote KM3_178_D06]) HSP 1 Score: 160.2 bits (404), Expect = 1.800e-35 Identity = 94/223 (42.15%), Postives = 129/223 (57.85%), Query Frame = 0 Query: 325 RPLVTIKLAIDQNGAVDDKTLKPARFTCDASLDAVHRLRRDAEAVLVGVETVVRDDPSLTVRRVPLRADQRQPIRVVLDRSLRIPYSSTLLNDRHRTLVYYVQGPWRHMRAADIML-SKFGSPVLIDCIYESELKPNDAAPLQEILGRLYDMGVRKHVMVEGGPRTAKAFLDAACADRAVIYQAPIAFNGEPVMSGIQSEDLEKAGLAYLGSYPSGVDTVHCW 547 RPLVT+K AID+NG VD + P RFT + SLDAVH LRR +AV+VGV TV+RDDP LTVRRVP+ +QP+R++LDR LR P S L++D T++++ +G + A + L S GS + L ++L L D G+++ VM+EGGP FLDA D ++++ + GE V GI SE L+ AGL G DT+ W Sbjct: 156 RPLVTLKAAIDRNGRVDSEHDAPGRFTSEESLDAVHELRRRCDAVVVGVNTVIRDDPELTVRRVPI-GKGKQPLRIILDRRLRTPTDSKLVSDGGNTIIFHSEGTDSGLTAKIVYLQSHLGS-------------SEEGVDLVQLLDLLGDKGIQR-VMIEGGPDVWCRFLDAGLVDEVYLFKSDVDL-GEGVEGGINSERLKHAGLTLAEESKCGEDTLQIW 362
BLAST of NO11G00310 vs. NCBI_GenBank
Match: AIF19547.1 (riboflavin biosynthesis protein (ribD) [uncultured marine group II/III euryarchaeote KM3_87_B04]) HSP 1 Score: 156.8 bits (395), Expect = 2.000e-34 Identity = 96/224 (42.86%), Postives = 130/224 (58.04%), Query Frame = 0 Query: 325 RPLVTIKLAIDQNGAVDDKTLKPARFTCDASLDAVHRLRRDAEAVLVGVETVVRDDPSLTVRRVPLRADQRQPIRVVLDRSLRIPYSSTLLNDRHRTLVYYVQGPWRHMRAADIMLSKFGSPVLIDCIYESELKPNDAAPLQEILGRLYDMGVRKHVMVEGGPRTAKAFLDAACADRAVIYQAPIAFNGEPVMSGIQSEDLEKAGLAYLGSYPSGVDTVHCWSR 549 RP+V +K A+D NG VD K+ PARFT SLD VHRLR+D +AVLVGV TVVRD+P LTVRRV L +QP+R+VLDR+LR P S+TL++D H TL+ + +G + I++ P+ D + L ++L L D + ++++VEGGP FL D A I+ + A GE + SGI LE AGL + SG DT+ W R Sbjct: 156 RPIVLLKAALDCNGNVDSKSGPPARFTSAESLDEVHRLRKDCDAVLVGVNTVVRDNPELTVRRVAL-GSGKQPLRIVLDRTLRTPESATLVSDEHDTLILHCEGDENGLECDTILM----PPLFSD--------TEEGVDLVQLLDLLGDREI-QNLLVEGGPDVWARFLADELVDEAYIFHSK-ANLGEGLNSGISDTVLETAGLHLVEERASGDDTLQVWKR 364
BLAST of NO11G00310 vs. NCBI_GenBank
Match: GAX20743.1 (hypothetical protein FisN_7Hh053 [Fistulifera solaris]) HSP 1 Score: 152.1 bits (383), Expect = 5.000e-33 Identity = 100/246 (40.65%), Postives = 135/246 (54.88%), Query Frame = 0 Query: 328 VTIKLAIDQNGAVDDKTLK-PARFTCDASLDAVHRLRRDAEAVLVGVETVVRDDPSLTVRRVPLRADQRQPIRVVLDRSLRIPYSST-------LLNDRHRTLVYYVQGPWRHMRAADIMLSKFGSPVLIDCIYESELKPND--AAPLQEILGRLYDMGVRKHVMVEGGPRTAKAFLDAACADRAVIYQAPIAFNGEPVMSGIQSEDLE-KAGLAYLGSYPSGVDTVHCWSRPTVPWPTEELSAWP 563 +T+K+A+D GA D K RFTCDASLD VHRLR +AVLVG TV D+PSL VRR +QP+RVVLD SL + SS+ L +D ++T+V++ D +K +L + + + + + L +L L D H+MVEGGP TA+ FL DR + QAPI F +P+ +G+ + L+ AGL YLGS GVD+V WSRP +PWP L WP Sbjct: 68 ITLKIAVDAKGAAADLGAKIQERFTCDASLDMVHRLRASCQAVLVGKGTVQADNPSLLVRRNV--TVTQQPLRVVLDPSLSLFSSSSSSTPPYQLFHDGYKTVVFH---------TIDAATTKI-KTLLSEAVQFRRVPRTEGGSISLTAVLHILSDEFKVHHLMVEGGPFTAQQFLQQKLVDRCIRVQAPIQFTDQPLDAGMTDDLLQGTAGLVYLGSACLGVDSVSYWSRPRLPWPGIHLEDWP 301
BLAST of NO11G00310 vs. NCBI_GenBank
Match: GAX11685.1 (hypothetical protein FisN_7Lh053 [Fistulifera solaris]) HSP 1 Score: 152.1 bits (383), Expect = 5.000e-33 Identity = 99/246 (40.24%), Postives = 132/246 (53.66%), Query Frame = 0 Query: 328 VTIKLAIDQNGAVDDKTLK-PARFTCDASLDAVHRLRRDAEAVLVGVETVVRDDPSLTVRRVPLRADQRQPIRVVLDRSLRI-------PYSSTLLNDRHRTLVYYVQGPWRHMRAADIMLSKFGSPVLIDCIYESELKPND--AAPLQEILGRLYDMGVRKHVMVEGGPRTAKAFLDAACADRAVIYQAPIAFNGEPVMSGIQSEDLEK-AGLAYLGSYPSGVDTVHCWSRPTVPWPTEELSAWP 563 +T+K+A+D GA D K RFTCDASLD VHRLR +AVLVG TV DDPSL VRR +QP+RVVLD SL + S L D ++T+V+Y + K+ L + ++ + + + L +L L D H+M+EGGP TA+ FL DR + QAPI F +P+ +G+ + L AGL YLGS GVD+V WSRP +PWP+ L WP Sbjct: 68 ITLKIAVDAKGAAADLGAKVQERFTCDASLDMVHRLRASCQAVLVGKGTVQADDPSLLVRRNV--TVTQQPLRVVLDPSLSLFCRPSPSAPSYQLFYDGYKTVVFYT----IDATTTTTTIKKY----LSEAVHFRRVPTTEDGSISLTAVLHILSDEFKVHHLMIEGGPFTAQQFLQQKLIDRCIRVQAPIQFTDQPLNAGMTDDLLHNTAGLVYLGSACLGVDSVSYWSRPGLPWPSLHLEDWP 303
BLAST of NO11G00310 vs. NCBI_GenBank
Match: OUV18438.1 (riboflavin biosynthesis protein RibD [Euryarchaeota archaeon TMED99]) HSP 1 Score: 151.8 bits (382), Expect = 6.500e-33 Identity = 89/227 (39.21%), Postives = 122/227 (53.74%), Query Frame = 0 Query: 325 RPLVTIKLAIDQNGAVDDKTLKPARFTCDASLDAVHRLRRDAEAVLVGVETVVRDDPSLTVRRVPLRADQRQPIRVVLDRSLRIPYSSTLLNDRHRTLVYYVQGPWRHMRAADIMLSKFGSPVLIDCIYESELKPNDAAPLQEILGRLYDMGVRKHVMVEGGPRTAKAFLDAACADRAVIYQAPIAFNGEPVMSGIQSEDLEKAGLAYLGSYPSGVDTVHCWSRPTV 552 RP+VT+K+A+D NG+VDD++ RFT D LD VH LR++ +AVLVGVETVVRD+P LTVRRV RQP+R++LD + R P STLL D H TLV D L +L L D +++ +MVEGGP T AFLD D + + + + EP+ S I +E L AGL++ + G +TV W+R ++ Sbjct: 155 RPMVTVKMAVDANGSVDDRSQNAQRFTSDTCLDFVHALRKECDAVLVGVETVVRDNPQLTVRRV---QTDRQPLRIILDPNQRTPKDSTLLTDEHETLV----------------------------------MGEDFTSLSALLNLLGDKEIQR-LMVEGGPTTVAAFLDQGFVDEFYLIHSDV-IHEEPIASNIDAERLTSAGLSHSATESWGEETVDIWTRTSI 342
BLAST of NO11G00310 vs. NCBI_GenBank
Match: XP_005826675.1 (hypothetical protein GUITHDRAFT_114190 [Guillardia theta CCMP2712] >EKX39695.1 hypothetical protein GUITHDRAFT_114190 [Guillardia theta CCMP2712]) HSP 1 Score: 149.4 bits (376), Expect = 3.200e-32 Identity = 92/244 (37.70%), Postives = 135/244 (55.33%), Query Frame = 0 Query: 326 PLVTIKLAIDQNGAVDDKTLKPARFTCDASLDAVHRLRRDAEAVLVGVETVVRDDP------SLTVRRVPLRADQRQPIRVVLDRSLRIPYSSTLLNDRHRTLVYYVQGPWRHMRAADIMLSKFGSPVLIDCIYESELKPNDAAPLQEILGRLYDMGVRKHVMVEGGPRTAKAFLDAACADRAVIYQAPIAFNGEPVMSGIQSEDLEKAGLAYLGSYPS-GVDTVHCWSRPTVPWPTEELSAWP 563 P+VT+K+A+D+NGAVDD + RFT + SLDAVHRLRR ++AVLVG+ TVVRDDP S+ R R + R L+ ++ D ++T++++ R ++S+ + + I + + + L ILG L ++GV K +M+EGGP T K FL DRA++ API F+ PV S I L+ AGLA LG + G D+V WS+ + WP+ +S WP Sbjct: 7 PIVTLKIALDENGAVDDLGITSKRFTSEQSLDAVHRLRRCSDAVLVGIGTVVRDDPYVPEESSIAGRE---RTTVKSRDRSFLEDRSACAIMCKVMRDGYKTVIFHSDSDEVDKRRIQ-LISELEATNQVSFI-PTPTNQHRSLDLTSILGELSNLGV-KELMLEGGPATVKRFLQQKLVDRAIVIVAPIKFDQLPVPSLIDHHVLKAAGLALLGEHQDWGKDSVSLWSKAQLQWPSPVISEWP 244 The following BLAST results are available for this feature:
BLAST of NO11G00310 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G00310 ID=NO11G00310|Name=NO11G00310|organism=Nannochloropsis oceanica|type=gene|length=3392bpback to top protein sequence of NO11G00310.1 >NO11G00310.1-protein ID=NO11G00310.1-protein|Name=NO11G00310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=563bpback to top Synonyms
Publications
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