jgi.p|Nanoce1779_2|608600, gene_10025 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|608600
Unique Namegene_10025
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_42:77799..78911 -

Link to JBrowse

Properties
Property NameValue
TranscriptId608686
ProteinId608600
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_42supercontigscaffold_42:77799..78911 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL062ncniL062Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO23G01660NO23G01660Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|608600mRNA_10025-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|608600mRNA_10025Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|608600

>mRNA_10025-protein ID=mRNA_10025-protein|Name=jgi.p|Nanoce1779_2|608600|organism=Nannochloropsis oceanica|type=polypeptide|length=239bp
MATPSYSLIYCIGTLLFFAFSTHAFLLPTTIKRSSRSSSRCTLRMSAASS
SPPSEAELVKVFGRLADKAIFMDESAGQCCHSGCDNCEWRYDFDIMRAAR
PKWLVTYAERKFDSDAHTAKWKALFDAPSAPISSSPLSDEDIFNTETAGP
TPLSSAVLLAERLSALPFSAPLGPSVSVPGEEPLQAETVAWLWEKLVPAG
SKSRTLTARLMEKRLKEWASGKDSMMWGDFVAKMTSEE*
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Synonyms
Publications