NO23G01660, NO23G01660 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO23G01660 vs. NCBI_GenBank
Match: EWM27792.1 (hypothetical protein Naga_100324g5 [Nannochloropsis gaditana]) HSP 1 Score: 319.3 bits (817), Expect = 1.000e-83 Identity = 160/226 (70.80%), Postives = 183/226 (80.97%), Query Frame = 0 Query: 23 HAFLLPTTIKRSSRSSSRCTL----------RMSAASSSP---PSEAELVKVFGRLADKAIFMDESAGQCCHSGCDNCEWRYDFDIMRAARPKWLVTYAERKFDSDAHTAKWKALFDAP-SAPISSSPLSDEDIFNTETAGPTPLSSAVLLAERLSALPFSAPLGPSVSVPGEEPLQAETVAWLWEKLVPAGSKSRTLTARLMEKRLKEWASGKDSMMWGDFVAKM 235 HAFLLP + +S C MS+ SSSP PSEAE K+FGRLADKAIFMDESAGQCCHSGCDNCEWRYDFDIMRAARPKWLVTYAERKFDSDAHTAKW ALFD P S+P SS+P+SDED+FNTETAGPT L+S +LAERLSALPF APLGP+V+V +EPL++ET WLW+KL+P GSKS LTARLME+RL+EWA+GKDS+MWGDF+A+M Sbjct: 20 HAFLLPAITRNMGQSIVFCASLASVDVSSPPSMSSTSSSPASIPSEAEWAKIFGRLADKAIFMDESAGQCCHSGCDNCEWRYDFDIMRAARPKWLVTYAERKFDSDAHTAKWTALFDPPASSPTSSTPVSDEDMFNTETAGPTSLASPTVLAERLSALPFLAPLGPTVTVTADEPLESETAVWLWDKLLPPGSKSAVLTARLMERRLREWANGKDSLMWGDFLAEM 245
BLAST of NO23G01660 vs. NCBI_GenBank
Match: XP_005840670.1 (hypothetical protein GUITHDRAFT_100666 [Guillardia theta CCMP2712] >EKX53690.1 hypothetical protein GUITHDRAFT_100666 [Guillardia theta CCMP2712]) HSP 1 Score: 138.7 bits (348), Expect = 2.400e-29 Identity = 80/194 (41.24%), Postives = 108/194 (55.67%), Query Frame = 0 Query: 47 AASSSPPSEAELVKVFGRLADKAIFMDESAGQCCHSGCDNCEWRYDFDIMRAARPKWLVTYAERKF-DSDAHTAKWKALFDAPSAPISSSPLSDEDIFNTETAGPTPLSSAVLLAERLSALPFSAPLGPS-VSVPGEEPLQAETVAWLWEKLVPAGSKSRTLTARLMEKRLKEWAS-GKDSMMWGDFVAKMTSE 238 ++S+ E ELVK+FGRLA+K IF D SAG CCHSGCD+CEWRY FDIM+AARPKW+ Y+E +F D H AKW LF +DE+ +T L ERL + F PLGPS + L+ E + W K+ + +T + M RL++ A+ G++ +MW DFVA + E Sbjct: 2 SSSTGQVEEVELVKIFGRLAEKMIFGDGSAGACCHSGCDDCEWRYSFDIMQAARPKWIPCYSENRFEDGREHIAKWSKLF------------NDENTITRDT-----------LYERLREMKFEMPLGPSGYMTASQAELKDEALDLFWAKI---SANKDKVTPKQMSIRLRKMATPGEEGVMWSDFVASILHE 169
BLAST of NO23G01660 vs. NCBI_GenBank
Match: XP_002185919.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >ACI65389.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 95.5 bits (236), Expect = 2.400e-16 Identity = 76/234 (32.48%), Postives = 109/234 (46.58%), Query Frame = 0 Query: 8 LIYCI--GTLLFFAFSTHAFLLPTTIKRSSRSSSRCTLRMSAASSSPPS--EAELVKVFGRLADKAIFMDESAGQCCHSGCDNCEWR-----YDFDIMRAARPKWLVTYAERKFDSDAHTAKW-KALFDAPSAPISSSPLSDEDIFNTETAGPTPLSSAVLLAERLSALPFSAPL-GPSVSVPGEEPLQAETVAWLWEKLVPAGSKSRTLTARLMEKRLKEWASGKDSMMWGDF 231 L++C+ G F+ TH S+R ++ + +A +S + + E VKVFGRLA+K I +D+SAG CC+S C +CE+R Y AARPKW+ +Y ER + HT KW + LF + L+ E+ +L AL ++ PL GP V TVA L++ LV G LT M RLKE A G++ + W F Sbjct: 5 LVFCLFAGATSFYPSLTHI------------QSNRISVHLFSAETSDVAIDQKEAVKVFGRLAEKYIMLDDSAGMCCYSACADCEYRLPGGGYRMADQSAARPKWIPSYTERAANDRQHTTKWSEQLF------VDGPALTKEE-----------------FVTKLKALEYAPPLGGPYVGASAAALDDTSTVAHLFDILVAEGKDK--LTKHRMSVRLKELADGEEGLTWAGF 201
BLAST of NO23G01660 vs. NCBI_GenBank
Match: KOO26906.1 (hypothetical protein Ctob_004425 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 89.7 bits (221), Expect = 1.300e-14 Identity = 71/244 (29.10%), Postives = 109/244 (44.67%), Query Frame = 0 Query: 4 PSYSLIYCIGTLLFFAFSTHAFLLPTTIKRSSRSSSRCTLRMSAASSSPPSEAELVKVFGRLADKAIFMDESAGQCCHSGCDNCEWR-----YDFDIMRAARPKWLVTYAERKFDSDAHTAKWKALFDAPSAPISSSPLSDEDIFNTETAGPTPLSSAVLLAERLSALPFSAPLGPSVSVPGEEPLQAETVAWLWEKLVPAGSKSRTLTARLMEKRLKEWA------------SGKDSMMWGDF 231 PS L+ + L + LLP RC ++ A S+ S + K+FGRLA+K +++D + G CCHS C +CEWR Y +D+M+A KWL Y R F D P P +++ +S D F+T RLSA+P+S +GP +V E L A+ + +W L ++ L+A M +RL+ + G DS++W +F Sbjct: 2 PSLLLLQSVALALSLGPTARPALLP----------RRCPAPIAQAVSTSLSTVDAAKIFGRLAEKTLYLDATVGACCHSACSDCEWRTPGGGYRWDVMKAQVAKWLPCYLTRDF------------ADEPLFPGAAATVSRAD-FDT----------------RLSAMPYSGAMGPKGTVK-EAELPAQALDAIWAFLCDGDAQCAELSASAMLQRLQSMSLLEGIERAGAIGQGPDSIVWNEF 205
BLAST of NO23G01660 vs. NCBI_GenBank
Match: EJK78004.1 (hypothetical protein THAOC_00121 [Thalassiosira oceanica]) HSP 1 Score: 87.8 bits (216), Expect = 4.900e-14 Identity = 68/208 (32.69%), Postives = 100/208 (48.08%), Query Frame = 0 Query: 31 IKRSSRSSSRCTLRMSAASSSPPSEAELVKVFGRLADKAIFMDESAGQCCHSGCDNCEWR-----YDFDIMRAARPKWLVTYAERKFDSDA--HTAKWKALFDAPSAPISSSPLSDEDIFNTETAGPTPLSSAVLLAERLSALPFSAPL-GPSVSVPGEEPLQAETVAWLWEKLVPAGSKSRTLTARLMEKRLKEWASGKDSMMWGDF 231 ++R++R S +A + P E VK+FGRLA+K I +D SAG CC+S C +CE+R Y AARPKW+ Y +R F++ HT KW + +IF T GP +RL +L F PL GP ++ + A L++ L AG K + LT M K +K+ A+G++ + W F Sbjct: 54 LRRTTRLSENAVATPAAIETDP---KEAVKLFGRLAEKYIMLDASAGMCCYSACTDCEYREPGGGYRMADQSAARPKWIPCYEDRNFEAQGKQHTTKWSS-----------------EIF---TDGPVVTKEQ--FVDRLISLEFKPPLGGPYLAASAAAIEDESSAAALFDVL--AGEKEK-LTRFRMGKAMKDLANGEEGLTWAMF 233
BLAST of NO23G01660 vs. NCBI_GenBank
Match: XP_002286629.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED96270.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 87.0 bits (214), Expect = 8.400e-14 Identity = 64/205 (31.22%), Postives = 98/205 (47.80%), Query Frame = 0 Query: 36 RSSSRCTLRMSAASSSPPSEAELVKVFGRLADKAIFMDESAGQCCHSGCDNCEWR-----YDFDIMRAARPKWLVTYAERKFDS-DAHTAKWKALFDAPSAPISSSPLSDEDIFNTETAGPTPLSSAVLLAERLSALPFSAPLGPSVSVPGEEPLQAETVAWLWEKLVPAGSKSRTLTARLMEKRLKEWASGKDSMMWGDFVAKM 235 +S + T +AA + P EA VK+FGRLA+K I +D SAG CC+SGC +CE+R Y ++RPKW+ +Y R+F+S HT KW +TE P + R+ + F+ PLG ++ E+ A ++ AG K + LT M K +K A+G++ + W +F A + Sbjct: 40 QSEATATADETAAIQTDPKEA--VKLFGRLAEKYIMLDASAGMCCYSGCTDCEFREPGGGYRMADQSSSRPKWIPSYDHREFNSGKEHTTKW----------------------STEIFVDGPAVTKEEFVSRVINMQFAPPLGGPYLAASAATIEDESAAASLFDIL-AGEKEK-LTKHRMGKEMKSLANGEEGLTWANFSAAL 218
BLAST of NO23G01660 vs. NCBI_GenBank
Match: GAX17167.1 (hypothetical protein FisN_10Lh013 [Fistulifera solaris]) HSP 1 Score: 86.3 bits (212), Expect = 1.400e-13 Identity = 61/209 (29.19%), Postives = 92/209 (44.02%), Query Frame = 0 Query: 27 LPTTIKRSSRSSSRCTLRMSAASSSPPSEAELVKVFGRLADKAIFMDESAGQCCHSGCDNCEWR-----YDFDIMRAARPKWLVTYAERKFDSDAHTAKWKALFDAPSAPISSSPLSDEDIFNTETAGPTPLSSAVLLAERLSALPFSAPLGPSVSVPGEEPLQAETVAWLWEKLVPAGSKSRTLTARLMEKRLKEWASGKDSMMWGDF 231 LPT S + +S L + +++ S E VK+FGRLA+K I +D SAG CC+S C +CE+R Y AARPKW+ +Y R+ + H+ KW +TE P S E++ L + PLG + + +++ G + LT M +RLKE A G++ + W F Sbjct: 3 LPTQWNGSQKVASALLLADTNQAAAAVSPKEAVKIFGRLAEKYIMLDSSAGMCCYSACTDCEFRLPGGGYRMADQSAARPKWIPSYETRQANGKEHSTKW----------------------STEIFAEGPAVSMEEFVEKVQQLEYVPPLGGPYVGASSAAFDDDQALQSFFEILSNGKEK--LTRHRMGQRLKELADGEEGLTWAAF 187
BLAST of NO23G01660 vs. NCBI_GenBank
Match: GAX21435.1 (hypothetical protein FisN_10Hh013 [Fistulifera solaris]) HSP 1 Score: 83.2 bits (204), Expect = 1.200e-12 Identity = 57/201 (28.36%), Postives = 89/201 (44.28%), Query Frame = 0 Query: 35 SRSSSRCTLRMSAASSSPPSEAELVKVFGRLADKAIFMDESAGQCCHSGCDNCEWR-----YDFDIMRAARPKWLVTYAERKFDSDAHTAKWKALFDAPSAPISSSPLSDEDIFNTETAGPTPLSSAVLLAERLSALPFSAPLGPSVSVPGEEPLQAETVAWLWEKLVPAGSKSRTLTARLMEKRLKEWASGKDSMMWGDF 231 SR S L ++ +++ S E VK+FGRLA+K I +D SAG CC+S C +CE+R Y AARPKW+ +Y R+ + H+ KW +T+ P S E++ + + PLG + + +++ G + LT M +RLKE A G++ + W F Sbjct: 30 SRKMSSTLLAETSQAAAAVSPKEAVKIFGRLAEKYIMLDSSAGMCCYSACADCEFRLPGGGYRMADQSAARPKWIPSYETRQANGKEHSTKW----------------------STKIFTEGPAVSMEEFVEKIQQIEYVPPLGGPYVGASSAAFDNDQALQSFFEILSNGKEK--LTRHRMSQRLKELADGEEGLTWAAF 206
BLAST of NO23G01660 vs. NCBI_GenBank
Match: OEU17611.1 (hypothetical protein FRACYDRAFT_184733 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 82.0 bits (201), Expect = 2.700e-12 Identity = 63/187 (33.69%), Postives = 88/187 (47.06%), Query Frame = 0 Query: 59 VKVFGRLADKAIFMDESAGQCCHSGCDNCEWR-----YDFDIMRAARPKWLVTYAERKFDSDA--HTAKWKALFDAPSAPISSSPLSDEDIFNTETAGPTPLSSAVLLAERLSALPFSAPL-GPSVSVPG---EEPLQAETVAWLWEKLVPAGSKSRTLTARLMEKRLKEWASGKDSMMWGDFVAKM 235 VK+FGRLA+K I +DES G CC+S C +CE+R Y A+RPKW+ Y ER F + HTAKW+ S + D +F T+ E + L F+ PL GP VS E+P AE +L++ L K LT M L + + G+ + W +F A + Sbjct: 59 VKLFGRLAEKYIMLDESGGMCCYSACKDCEFRLPGGGYRMADQSASRPKWIPVYEERVFANQGKEHTAKWR------------SSIFDGKLFVTKDE----------FVESILELDFATPLGGPFVSKSAGTLEDPTGAE---YLFDILAEGKEK---LTRHKMHLSLTKLSEGEAGLTWPNFSAAL 217
BLAST of NO23G01660 vs. NCBI_GenBank
Match: XP_005781105.1 (hypothetical protein EMIHUDRAFT_234836 [Emiliania huxleyi CCMP1516] >EOD28676.1 hypothetical protein EMIHUDRAFT_234836 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 77.0 bits (188), Expect = 8.700e-11 Identity = 50/193 (25.91%), Postives = 75/193 (38.86%), Query Frame = 0 Query: 52 PPSEAELVKVFGRLADKAIFMDESAGQCCHSGCDNCEWR-----YDFDIMRAARPKWLVTYAERKFDSD--AHTAKWKALFDAPSAPISSSPLSDEDIFNTETAGPTPLSSAVLLAERLSALPFSAPLGP--SVSVPGEEPLQAETVAWLW-----EKLVPAGSKSRTLTARLMEKRLKEWASGKDSMMWGDF 231 P LV LA+ + +D G CCHS C +CEWR Y FD+++A +PKW+ Y R F + H +W + ++ + E L+ L F P+GP SV G P A W W + L P G+++R + G D ++W +F Sbjct: 3 PRGRPTLVVPVCSLAEPLVHLDPEVGACCHSACSDCEWRLPDGGYRFDVLKATKPKWVPCYLRRDFGDERGCHEPRWASALFPGGGEVTRAQ----------------------FGEALAGLGFEMPMGPRGSVGADGGVPESAADALWAWLAGDGDALTPEGARTRLQAMAEDPQAEGAVGEGPDHLVWKEF 173 The following BLAST results are available for this feature:
BLAST of NO23G01660 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 10
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO23G01660 ID=NO23G01660|Name=NO23G01660|organism=Nannochloropsis oceanica|type=gene|length=1283bpback to top protein sequence of NO23G01660.1 >NO23G01660.1-protein ID=NO23G01660.1-protein|Name=NO23G01660.1|organism=Nannochloropsis oceanica|type=polypeptide|length=239bpback to top Synonyms
Publications
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