Rab8C, gene905 (gene) Nannochloropsis gaditana

Overview
NameRab8C
Unique Namegene905
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:785685..787007 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100022g58
Gene biotypeprotein_coding
GeneRab8C
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:785685..787007 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0000166nucleotide binding
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO:0006950response to stress
GO:0016043cellular component organization
GO:0048856anatomical structure development
GO:0009605response to external stimulus
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0005773vacuole
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL052ngnoL052Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G02880NO03G02880Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna942rna942-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna942rna942Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna942

>rna942-protein ID=rna942-protein|Name=rna942|organism=Nannochloropsis gaditana|type=polypeptide|length=300bp
MEDMSPHLTTRATTSVAPSLQSSPRDSKVKSRNRGSGKRTAGLSQKTLNI
VNNLQPAPATFSKERDDEEEERLLAMEEKRRQVAAGSDPSSSLPSSVVEY
TEFMSIRILLLGDSGVGKTSLMMRYSENEFAPCLLSTAGVDFKVRHLTLE
ESKRKVKVQIWDTAGQERMHVITRTYYKGSHGIALVYNLTDPDSFRNVNY
WMANIQQHAGDKVVKTLIGNKADLTDRAISYEQGAAMAKEYGFMHFFETS
AKSGANVHGAFNALALDIVRRIEEAQNESVVAAFGNGGLGNNPKKQCVID
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Synonyms
Publications