Naga_100019g66, gene8928 (gene) Nannochloropsis gaditana

Overview
NameNaga_100019g66
Unique Namegene8928
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037252.1:98891..103161 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100019g66
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:98891..103161 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700DNA-binding transcription factor activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006950response to stress
GO:0006139nucleobase-containing compound metabolic process
GO:0009628response to abiotic stimulus
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL078ngnoL078Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL077ngnoL077Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO22G01460NO22G01460Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna9204rna9204-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna9204rna9204Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna9204

>rna9204-protein ID=rna9204-protein|Name=rna9204|organism=Nannochloropsis gaditana|type=polypeptide|length=695bp
MTRAGRRSRSNSMSSTGSNAQGLVSISDKKMDMPVVLPTSEFNSSNITNV
SCTSSTCSSVATDGNATTFPRKLAEMLQHESHVIAWSMHGLSFFICDNEA
LTYRLLPKYFRHNKLTSFQRQLNLYGFRRITKGTDTGAYFHPQFRRDRPE
LVNHIRRMPGQGATATAKFLPLYYKDVQNSSPTSMPDVSLAERSAFMDVS
ETNAGISVKKANRRSRKGGRAPRRRRDRSESSASNVSQASLTSSAGSECS
FSSASTGISNQDGSDCVDGSAFGAGGLSCGPGEYASEGSMSSFPVGPRHY
QYNALPGGAENLDGGSESAMEGFDFADPAPSLTLTSSYESGLSLLSDEGS
YMSSSSATSKGAVEHAFLPHNHQPLVRLPNAFAASNSSGRQGKGYVLNGQ
KLTSRSPSPSAQHQAARAEVGLPPRHSSGGVQSVGPVRFFMPPLSDPVGA
DAMKMSKSCSARAAGNKMIEGDEDIKVTATLYHGSINGANVTSNNTGESD
KNKLLSGSALPRTFSASSFSQWLNSGSNSQTTAQTSPHPAVLLPAKMDFR
PLSSCGTNLGSETVGSDLVGTTELSSPSTTTSSVSMSPTSRAPSSPPLPL
LKINRCSSMSSELWRGWGSTEDLEALADLDTSIDDIFGSAGPESDMTVQS
AGGWDWSQGQNAEPARPQSYSTSGPSQAAATGVSALGALVGIKAS
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Synonyms
Publications