NO22G01460, NO22G01460 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO22G01460 vs. NCBI_GenBank
Match: EWM21507.1 (Winged helix-turn-helix transcription repressor [Nannochloropsis gaditana]) HSP 1 Score: 234.6 bits (597), Expect = 1.100e-57 Identity = 292/761 (38.37%), Postives = 358/761 (47.04%), Query Frame = 0 Query: 41 INASTSGSSSTLDAANGLTFPRKLAEMLEYGENVIVWSQHGLSFYICDEDALAHKLLPQYFRHNKITSFQRQLNLYGFRRITKGVDTGAYFHPQFRRDRPDLVSHIRRMPGQGATATAKFLPLYYKDVQNSAPVHITPTSDAAAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGELFLKVGAEVEAGKSEQFYMEDGALDYYESDRNGEEHDEDGKEEGGGV---GGEQDVMDKVMEDEYLFMDPPPSLSLASLRESSLSLVSDDGSHVSRNSXXXXXXXXXXXXXXSLNHHY-QHRHRP-DHLSVSVPPHLVSGGYSNGWQL--QQHPSSLPSSSTSLDSLSSNCSSSLSHMTHTCLSLEDSISSVPSTCPTAQRMKPSIRFCMPPLPGTAGVDDTSHPTATTIR----KLPIG------STALRHPPLAFSNTTIATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTLPPSFSVSSFSQWLN-GSHTLTPADTNLGQR-QHQQQLDKAPPSSKLXXXXXXXXXXXXXXSPAVLLDTAPSGPLDTPDLPPASSLSFQPPXXXRPLAK--RCSSMSSELWRGWGSAGDLQALAELDNSIDDIFG--GPDTETALFSAGGGVEGSTGGATGAAARYQHEAATAMPVQNVGVG---LGAFIGITAA 776 ++ ++S SS N TFPRKLAEML++ +VI WS HGLSF+ICD +AL ++LLP+YFRHNK+TSFQRQLNLYGFRRITKG DTGAYFHPQFRRDRP+LV+HIRRMPGQGATATAKFLPLYYKDVQNS+P + S A + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G F G G+ Y +G++ + G H + GG GG + M + + F DP PSL+L S ES LSL+SD+GS++S +S ++ H + H H+P L + SG G+ L Q+ S PS S + + H S V S P +RF MPPL G D + + R K+ G + L H + +N T LP +FS SSFSQWLN GS++ T A T+ ++D P SS XXXX PP PL K RCSSMSSELWRGWGS DL+ALA+LD SIDDIFG GP+++ + SAGG + G AR Q +T+ P Q G LGA +GI A+ Sbjct: 50 VSCTSSTCSSVATDGNATTFPRKLAEMLQHESHVIAWSMHGLSFFICDNEALTYRLLPKYFRHNKLTSFQRQLNLYGFRRITKGTDTGAYFHPQFRRDRPELVNHIRRMPGQGATATAKFLPLYYKDVQNSSPTSMPDVSLAERSA----------------FMDVSETNAGISVKKANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISNQDGSDCVDGSAFGAGGLSCGPGE----YASEGSMSSFPV---GPRHYQYNALPGGAENLDGGSESAM-----EGFDFADPAPSLTLTSSYESGLSLLSDEGSYMSSSS---------ATSKGAVEHAFLPHNHQPLVRLPNAFAASNSSGRQGKGYVLNGQKLTSRSPSPSAQHQAARAEVGLPPRH----------SSGGVQSVGP--------VRFFMPPLSDPVGADAMKMSKSCSARAAGNKMIEGDEDIKVTATLYHGSINGANVT---------------------------------------------------SNNTGESDKNKLLSGSALPRTFSASSFSQWLNSGSNSQTTAQTSPHPAVLLPAKMDFRPLSS---CGTNLGSETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPL---PLLKINRCSSMSSELWRGWGSTEDLEALADLDTSIDDIFGSAGPESDMTVQSAGGW--DWSQGQNAEPARPQ-SYSTSGPSQAAATGVSALGALVGIKAS 695
BLAST of NO22G01460 vs. NCBI_GenBank
Match: XP_002176672.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51135.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 109.8 bits (273), Expect = 3.900e-20 Identity = 52/98 (53.06%), Postives = 66/98 (67.35%), Query Frame = 0 Query: 60 FPRKLAEML-EYGENVIVWSQHGLSFYICDEDALAHKLLPQYFRHNKITSFQRQLNLYGFRRITKGVDTGAYFHPQFRRDRPDLVSHIRRMPGQGATA 157 FPRKL +ML + +V+ W G SF + D D +LP+YFRH K+TSFQRQLNLYGFRR+TKG D GAY H FRRD PDL ++R +G+ + Sbjct: 251 FPRKLMDMLRKEDSSVVAWLPSGDSFSVRDSDRFVADILPRYFRHTKLTSFQRQLNLYGFRRMTKGPDAGAYRHDMFRRDDPDLCLQMKRTKQKGSAS 348
BLAST of NO22G01460 vs. NCBI_GenBank
Match: GAX20436.1 (hypothetical protein FisN_22Hh002 [Fistulifera solaris]) HSP 1 Score: 102.4 bits (254), Expect = 6.300e-18 Identity = 49/104 (47.12%), Postives = 65/104 (62.50%), Query Frame = 0 Query: 60 FPRKLAEMLE-----YGENVIVWSQHGLSFYICDEDALAHKLLPQYFRHNKITSFQRQLNLYGFRRITKGVDTGAYFHPQFRRDRPDLVSHIRRMPGQGATATA 159 FP +L EMLE +++I W HG F I D D A +LLP++FR K +SF+RQ+NLYGFR++ G D GAY+H F R RPDL +RR+ G+ TA Sbjct: 44 FPARLHEMLEDTLFDGQDHIISWQVHGRCFKIHDFDVFARELLPKFFRQTKFSSFKRQMNLYGFRKVLSGTDCGAYYHELFLRGRPDLAMILRRVGGKSTDGTA 147
BLAST of NO22G01460 vs. NCBI_GenBank
Match: GAX11334.1 (hypothetical protein FisN_22Lh002 [Fistulifera solaris]) HSP 1 Score: 102.4 bits (254), Expect = 6.300e-18 Identity = 49/104 (47.12%), Postives = 65/104 (62.50%), Query Frame = 0 Query: 60 FPRKLAEMLE-----YGENVIVWSQHGLSFYICDEDALAHKLLPQYFRHNKITSFQRQLNLYGFRRITKGVDTGAYFHPQFRRDRPDLVSHIRRMPGQGATATA 159 FP +L EMLE +++I W HG F I D D A +LLP++FR K +SF+RQ+NLYGFR++ G D GAY+H F R RPDL +RR+ G+ TA Sbjct: 44 FPARLHEMLEDTLFDGQDHIISWQVHGRCFKIHDFDVFARELLPKFFRQTKFSSFKRQMNLYGFRKVLSGTDCGAYYHELFLRGRPDLAMILRRVGGKSTDGTA 147
BLAST of NO22G01460 vs. NCBI_GenBank
Match: GAX16270.1 (hypothetical protein FisN_3Hh248 [Fistulifera solaris]) HSP 1 Score: 101.7 bits (252), Expect = 1.100e-17 Identity = 51/109 (46.79%), Postives = 69/109 (63.30%), Query Frame = 0 Query: 48 SSSTLDAANGLTFPRKLAEML-EYGENVIVWSQHGLSFYICDEDALAHKLLPQYFRHNKITSFQRQLNLYGFRRITKGVDTGAYFHPQFRRDRPDLVSHIRRMPGQGAT 156 SS L ++ FPRKL +ML + ++V+ + G F + D + + +L +YFRH K+TSFQRQLNLYGFRRITKG D GAY H F RD PD ++R +GA+ Sbjct: 213 SSPALGSSGSNPFPRKLMDMLNKEDQSVVAFLPSGDGFVVRDPERFVNDILQRYFRHTKLTSFQRQLNLYGFRRITKGQDAGAYRHELFHRDHPDRCLQMKRTKQKGAS 321
BLAST of NO22G01460 vs. NCBI_GenBank
Match: XP_002293508.1 (hypothetical protein THAPSDRAFT_263978, partial [Thalassiosira pseudonana CCMP1335] >EED89244.1 hypothetical protein THAPSDRAFT_263978, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 101.3 bits (251), Expect = 1.400e-17 Identity = 55/120 (45.83%), Postives = 72/120 (60.00%), Query Frame = 0 Query: 30 APNDATGTGRMINASTSGSSSTLDAANGLTFPRKLAEMLEYGENVIV-WSQHGLSFYICDEDALAHKLLPQYFRHNKITSFQRQLNLYGFRRITKGVDTGAYFHPQFRRDRPDLVSHIRR 149 +P D+ GT G S ++ FPRKL +ML ++ +V W G +F + D + +LP+YFRH K+TSFQRQLNLYGFRRITKG D GAY H F RD+PDL ++R Sbjct: 10 SPADSLGTPSS-TPVLKGKSKNGRKSHSNPFPRKLMDMLTKEDSAVVSWLPTGDAFMVRDNERFVGDILPRYFRHTKLTSFQRQLNLYGFRRITKGPDQGAYRHEWFLRDQPDLCIQMKR 128
BLAST of NO22G01460 vs. NCBI_GenBank
Match: GAX15802.1 (hypothetical protein FisN_3Lh248 [Fistulifera solaris]) HSP 1 Score: 101.3 bits (251), Expect = 1.400e-17 Identity = 51/113 (45.13%), Postives = 72/113 (63.72%), Query Frame = 0 Query: 44 STSGSSSTLDAANGLTFPRKLAEML-EYGENVIVWSQHGLSFYICDEDALAHKLLPQYFRHNKITSFQRQLNLYGFRRITKGVDTGAYFHPQFRRDRPDLVSHIRRMPGQGAT 156 +++ SS L ++ FPRKL +ML + ++V+ + G F + D + + +L +YFRH K+TSFQRQLNLYGFRRITKG D GAY H F RD PD ++R +GA+ Sbjct: 157 NSTTSSPALGSSGSNPFPRKLMDMLNKEDQSVVAFLPSGDGFVVRDPERFVNDILQRYFRHTKLTSFQRQLNLYGFRRITKGQDAGAYRHELFHRDHPDRCLQMKRTKQKGAS 269
BLAST of NO22G01460 vs. NCBI_GenBank
Match: GAX28823.1 (hypothetical protein FisN_35Lh010 [Fistulifera solaris]) HSP 1 Score: 100.1 bits (248), Expect = 3.100e-17 Identity = 51/124 (41.13%), Postives = 69/124 (55.65%), Query Frame = 0 Query: 60 FPRKLAEMLEYGE-----NVIVWSQHGLSFYICDEDALAHKLLPQYFRHNKITSFQRQLNLYGFRRITKGVDTGAYFHPQFRRDRPDLVSHIRRMPGQGATATAKFLPLYYKDVQNSAPVHITP 179 FP KL +L+ E +VI W HG F I + ++P+YFR +K+TSFQRQLNLYGF R+T+G D G Y+H F R + +L S ++R +G A P D APV +TP Sbjct: 119 FPNKLHAVLDQVEADGLSHVISWQSHGRCFVIHNPQEFVEYVMPRYFRQSKLTSFQRQLNLYGFSRLTRGPDAGGYYHELFLRGKVNLCSRMQRTKVKGTMFKAASSPENEPDFYTMAPVRVTP 242
BLAST of NO22G01460 vs. NCBI_GenBank
Match: CBN80163.1 (Putative Heat Shock transcription factor [Ectocarpus siliculosus]) HSP 1 Score: 99.8 bits (247), Expect = 4.100e-17 Identity = 51/110 (46.36%), Postives = 67/110 (60.91%), Query Frame = 0 Query: 40 MINASTSGSSSTLDAANGLTFPRKLAEMLEYGEN-VIVWSQHGLSFYICDEDALAHKLLPQYFRHNKITSFQRQLNLYGFRRITKGVDTGAYFHPQFRRDRPDLVSHIRR 149 M NAS S + F RKLAE+L I W+ +G +F + D + + +L +Y+RH+K +SFQRQLNLY FR+I KG D G Y HP FRRDRPD + H+RR Sbjct: 1 MANASEGESGNE-------AFARKLAEILTTESTATISWNANGSAFQVHDVERFSEDILTKYYRHSKFSSFQRQLNLYSFRKIVKGADAGGYAHPMFRRDRPDDLYHVRR 103
BLAST of NO22G01460 vs. NCBI_GenBank
Match: GAX16311.1 (hypothetical protein FisN_35Hh010 [Fistulifera solaris]) HSP 1 Score: 99.8 bits (247), Expect = 4.100e-17 Identity = 51/124 (41.13%), Postives = 69/124 (55.65%), Query Frame = 0 Query: 60 FPRKLAEMLEYGE-----NVIVWSQHGLSFYICDEDALAHKLLPQYFRHNKITSFQRQLNLYGFRRITKGVDTGAYFHPQFRRDRPDLVSHIRRMPGQGATATAKFLPLYYKDVQNSAPVHITP 179 FP KL +L+ E +VI W HG F I + ++P+YFR +K+TSFQRQLNLYGF R+T+G D G Y+H F R + +L S ++R +G A P D APV +TP Sbjct: 119 FPNKLHAVLDQVEADGLSHVISWQPHGRCFVIHNPQEFVEYVMPRYFRQSKLTSFQRQLNLYGFSRLTRGPDAGGYYHELFLRGKVNLCSRMQRTKVKGTMFKAASSPENEPDFYTMAPVRVTP 242 The following BLAST results are available for this feature:
BLAST of NO22G01460 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO22G01460 ID=NO22G01460|Name=NO22G01460|organism=Nannochloropsis oceanica|type=gene|length=4023bpback to top protein sequence of NO22G01460.1 >NO22G01460.1-protein ID=NO22G01460.1-protein|Name=NO22G01460.1|organism=Nannochloropsis oceanica|type=polypeptide|length=776bpback to top Synonyms
Publications
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