dpm3, gene6923 (gene) Nannochloropsis gaditana

Overview
Namedpm3
Unique Namegene6923
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:592211..593454 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100934g2
Gene biotypeprotein_coding
Genedpm3
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:592211..593454 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0009058biosynthetic process
Vocabulary: Cellular Component
TermDefinition
GO:0005783endoplasmic reticulum
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL040ngnoL040Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL039ngnoL039Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO15G00430NO15G00430Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna7161rna7161-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna7161rna7161Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna7161

>rna7161-protein ID=rna7161-protein|Name=rna7161|organism=Nannochloropsis gaditana|type=polypeptide|length=169bp
MCCSGPTECSSRGCNEQIDITNSNNRKTTELVFAHTGTKGHYTTGVKGIG
FLAFVFVSRVISMSRPPPSPALWAPPRWMGLLLLFTLCTAVWLMLYSDPL
QSFHFTQPVTDVLETFPLWILVSLGAYALGSIGLSLMCFNTCPEAVVALS
EDIRQAKADLWGKGFDIDH
back to top
Synonyms
Publications