Naga_100139g4, gene6856 (gene) Nannochloropsis gaditana

Overview
NameNaga_100139g4
Unique Namegene6856
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:425434..427137 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100139g4
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:425434..427137 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL039ngnoL039Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO19G00960NO19G00960Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna7090rna7090-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna7091rna7091-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna7092rna7092-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna7090rna7090Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna7091rna7091Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna7092rna7092Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna7090

>rna7090-protein ID=rna7090-protein|Name=rna7090|organism=Nannochloropsis gaditana|type=polypeptide|length=190bp
MGLPAYCYTRAAQVMSGQRRRGPAHQNTFAFRHNPKSKKTERILASPIEG
LCHRCHEKVEWRKKYRKYKPLSAPATCTGCHTKSVRAAYHQICDPCAEKR
AVCAGCAEPKSIVKKTGAAAEKDVEEKRRALERDIKGLHLRKQRKILREF
DRSGGDMDVEGAMEAVGSDLDDDEIGDSDDKEYDEDSERE
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protein sequence of rna7091

>rna7091-protein ID=rna7091-protein|Name=rna7091|organism=Nannochloropsis gaditana|type=polypeptide|length=189bp
MTSHPTACTEAQVMSGQRRRGPAHQNTFAFRHNPKSKKTERILASPIEGL
CHRCHEKVEWRKKYRKYKPLSAPATCTGCHTKSVRAAYHQICDPCAEKRA
VCAGCAEPKSIVKKTGAAAEKDVEEKRRALERDIKGLHLRKQRKILREFD
RSGGDMDVEGAMEAVGSDLDDDEIGDSDDKEYDEDSERE
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protein sequence of rna7092

>rna7092-protein ID=rna7092-protein|Name=rna7092|organism=Nannochloropsis gaditana|type=polypeptide|length=176bp
MSGQRRRGPAHQNTFAFRHNPKSKKTERILASPIEGLCHRCHEKVEWRKK
YRKYKPLSAPATCTGCHTKSVRAAYHQICDPCAEKRAVCAGCAEPKSIVK
KTGAAAEKDVEEKRRALERDIKGLHLRKQRKILREFDRSGGDMDVEGAME
AVGSDLDDDEIGDSDDKEYDEDSERE
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Synonyms
Publications