Naga_100082g22, gene6528 (gene) Nannochloropsis gaditana

Overview
NameNaga_100082g22
Unique Namegene6528
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:422424..425080 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100082g22
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:422424..425080 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003676nucleic acid binding
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL035ngnoL035Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO16G02420NO16G02420Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6752rna6752-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6752rna6752Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6752

>rna6752-protein ID=rna6752-protein|Name=rna6752|organism=Nannochloropsis gaditana|type=polypeptide|length=689bp
MLVRRAVFRLTNQHPCRRAVLLSVLLPAVLMTSRGNAFVQPSPHRGKHSS
KHHHQRIVDQQHQYQQLQQQRDQHTHPTLPSAPATSASNHLTDALFRDLP
LSDNTQRALAETLGFDRMTHVQEATMPLVLAGNDVMAKAKTGTGKTLAFC
IPALEQLRQRPPRAGSISVLVLSPTRELAQQIHVEASKLLTFQKALKADL
SYGGTNVNAERKRLLQRPPDILVATPGRLLDHLENNGLAPYFQDLRVLIL
DEADQLLDMGFRPAIEKIIGFLPSHARQTLLFSATMPKGVKEVAGLAMRP
GYKFIDTVGAEEQDTNIQVTQSAAILPLDQHFAYLHTLLSKAKQDPAHKV
IVFFTTARLVGYYCELMGKAGIQAMEIHSRKSQATRTKTSDQFRVAKSGI
LFSSDVSARGVDYEGITHVVQMGVPSNREMYVHRLGRTGRAGRDGQGILV
LTPDESFFLRDLKDLPVSMIPTQACQPDQASLEAVRRAIPSVDERAVGAA
YQAWLGFYNSVPGLKWSKTRLVEEANAFALIMGCKDQPPALLKKTVGMMG
LRGVPGLRIEGSLPGASGRNGGHAGGGNNVRKRTPSVSSDAGGRRGRDTH
GGGRVGEPSQKRPPHANGQSPGQAQSYNFPKPDVRMGSEGAGRGDGISGK
GGLGREKPYRDRGGRGSTPTGGGSGRGGGRKGGGYDGSR
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Synonyms
Publications